RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 CILPO75339 1184 aa9.7□□□□□ -0.86
PDE4D-201ENST00000309641 C8AP07357 584 aa9.7□□□□□ -0.86
PDE4D-201ENST00000309641 PTPN1P18031 435 aaKnown RBP9.7□□□□□ -0.86
PDE4D-201ENST00000309641 ACO1P21399 889 aaKnown RBP9.7□□□□□ -0.86
PDE4D-201ENST00000309641 PCSK1P29120 753 aa9.7□□□□□ -0.86
PDE4D-201ENST00000309641 INCA1Q0VD86 236 aa9.7□□□□□ -0.86
PDE4D-201ENST00000309641 MDH1BQ5I0G3 518 aa9.7□□□□□ -0.86
PDE4D-201ENST00000309641 RARS2Q5T160 578 aaKnown RBP9.7□□□□□ -0.86
PDE4D-201ENST00000309641 FAM171BQ6P995 826 aa9.7□□□□□ -0.86
PDE4D-201ENST00000309641 UBR7Q8N806 425 aa9.7□□□□□ -0.86
PDE4D-201ENST00000309641 PCED1BQ96HM7 432 aa9.7□□□□□ -0.86
PDE4D-201ENST00000309641 S1PR5Q9H228 398 aa9.7□□□□□ -0.86
PDE4D-201ENST00000309641 CYP4F11Q9HBI6 524 aa9.7□□□□□ -0.86
PDE4D-201ENST00000309641 UBE2TQ9NPD8 197 aaPredicted RBP9.7□□□□□ -0.86
PDE4D-201ENST00000309641 TMEM30AQ9NV96 361 aa9.7□□□□□ -0.86
PDE4D-201ENST00000309641 ABI2Q9NYB9 513 aaPredicted RBP9.7□□□□□ -0.86
PDE4D-201ENST00000309641 AFF4Q9UHB7 1163 aaKnown RBP9.7□□□□□ -0.86
PDE4D-201ENST00000309641 CCDC195A0A1B0GUA6 201 aa9.7□□□□□ -0.86
PDE4D-201ENST00000309641 GTPBP10A4D1E9 387 aaKnown RBP9.7□□□□□ -0.86
PDE4D-201ENST00000309641 LGALS16A8MUM7 142 aa9.7□□□□□ -0.86
PDE4D-201ENST00000309641 CCL16O15467 120 aa9.7□□□□□ -0.86
PDE4D-201ENST00000309641 PNMA6AP0CW24 399 aaPredicted RBP9.7□□□□□ -0.86
PDE4D-201ENST00000309641 P4HA1P13674 534 aa9.7□□□□□ -0.86
PDE4D-201ENST00000309641 CCDC130P13994 396 aa9.7□□□□□ -0.86
PDE4D-201ENST00000309641 CYP2F1P24903 491 aa9.7□□□□□ -0.86
PDE4D-201ENST00000309641 GPR15P49685 360 aa9.7□□□□□ -0.86
PDE4D-201ENST00000309641 CACNA2D1P54289 1103 aa9.7□□□□□ -0.86
PDE4D-201ENST00000309641 TSPY1Q01534 308 aa9.7□□□□□ -0.86
PDE4D-201ENST00000309641 CETN1Q12798 172 aa9.7□□□□□ -0.86
PDE4D-201ENST00000309641 SDHAF4Q5VUM1 108 aa9.7□□□□□ -0.86
PDE4D-201ENST00000309641 TPGS2Q68CL5 300 aa9.7□□□□□ -0.86
PDE4D-201ENST00000309641 PAQR9Q6ZVX9 377 aa9.7□□□□□ -0.86
PDE4D-201ENST00000309641 B3GALNT2Q8NCR0 500 aa9.7□□□□□ -0.86
PDE4D-201ENST00000309641 GPR152Q8TDT2 470 aa9.7□□□□□ -0.86
PDE4D-201ENST00000309641 CASP10Q92851 521 aa9.7□□□□□ -0.86
PDE4D-201ENST00000309641 MYLPFQ96A32 169 aa9.7□□□□□ -0.86
PDE4D-201ENST00000309641 ZNF707Q96C28 371 aaPredicted RBP9.7□□□□□ -0.86
PDE4D-201ENST00000309641 CYP3A43Q9HB55 503 aa9.7□□□□□ -0.86
PDE4D-201ENST00000309641 ACP6Q9NPH0 428 aa9.7□□□□□ -0.86
PDE4D-201ENST00000309641 FAM49BQ9NUQ9 324 aa9.7□□□□□ -0.86
PDE4D-201ENST00000309641 CDH9Q9ULB4 789 aa9.7□□□□□ -0.86
PDE4D-201ENST00000309641 GRXCR2A6NFK2 248 aa9.69□□□□□ -0.86
PDE4D-201ENST00000309641 NRG2O14511 850 aaPredicted RBP9.69□□□□□ -0.86
PDE4D-201ENST00000309641 PRRG1O14668 218 aa9.69□□□□□ -0.86
PDE4D-201ENST00000309641 ZMYND10O75800 440 aa9.69□□□□□ -0.86
PDE4D-201ENST00000309641 NOL4O94818 638 aa9.69□□□□□ -0.86
PDE4D-201ENST00000309641 FAM163BP0C2L3 166 aa9.69□□□□□ -0.86
PDE4D-201ENST00000309641 KCNQ1P51787 676 aa9.69□□□□□ -0.86
PDE4D-201ENST00000309641 RAD23BP54727 409 aa9.69□□□□□ -0.86
PDE4D-201ENST00000309641 UBXN1Q04323 297 aa9.69□□□□□ -0.86
PDE4D-201ENST00000309641 SYCP1Q15431 976 aa9.69□□□□□ -0.86
PDE4D-201ENST00000309641 ARHGAP44Q17R89 818 aa9.69□□□□□ -0.86
PDE4D-201ENST00000309641 GPIHBP1Q8IV16 184 aa9.69□□□□□ -0.86
PDE4D-201ENST00000309641 TCEAL8Q8IYN2 117 aa9.69□□□□□ -0.86
PDE4D-201ENST00000309641 SLC4A11Q8NBS3 891 aa9.69□□□□□ -0.86
PDE4D-201ENST00000309641 SMRP1Q8NCR6 262 aa9.69□□□□□ -0.86
PDE4D-201ENST00000309641 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.69□□□□□ -0.86
PDE4D-201ENST00000309641 MYCBPAPQ8TBZ2 947 aa9.69□□□□□ -0.86
PDE4D-201ENST00000309641 SPATA18Q8TC71 538 aa9.69□□□□□ -0.86
PDE4D-201ENST00000309641 B3GNT5Q9BYG0 378 aa9.69□□□□□ -0.86
PDE4D-201ENST00000309641 ZNF518BQ9C0D4 1074 aa9.69□□□□□ -0.86
PDE4D-201ENST00000309641 RBSNQ9H1K0 784 aa9.69□□□□□ -0.86
PDE4D-201ENST00000309641 PLEKHA4Q9H4M7 779 aa9.69□□□□□ -0.86
PDE4D-201ENST00000309641 RTN4Q9NQC3 1192 aaKnown RBP9.69□□□□□ -0.86
PDE4D-201ENST00000309641 HCFC1R1Q9NWW0 138 aa9.69□□□□□ -0.86
PDE4D-201ENST00000309641 APEX2Q9UBZ4 518 aa9.69□□□□□ -0.86
PDE4D-201ENST00000309641 SIK3Q9Y2K2 1263 aa9.69□□□□□ -0.86
PDE4D-201ENST00000309641 INSL5Q9Y5Q6 135 aa9.69□□□□□ -0.86
PDE4D-201ENST00000309641 C2orf16Q68DN1 1984 aa9.69□□□□□ -0.86
PDE4D-201ENST00000309641 SPDYE4A6NLX3 237 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 GOLGA6L19H0YKK7 550 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 NCK2O43639 380 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 CAVIN2O95810 425 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 ATF6P18850 670 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 BDNFP23560 247 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 ELF1P32519 619 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 NTHL1P78549 312 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 FANCCQ00597 558 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 CYP27A1Q02318 531 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 GCNT1Q02742 428 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 MGAT5BQ3V5L5 792 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 LIN9Q5TKA1 542 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 TMEM270Q6UE05 265 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 DCP1BQ8IZD4 617 aaKnown RBP9.68□□□□□ -0.86
PDE4D-201ENST00000309641 FUKQ8N0W3 1084 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 CRYBG2Q8N1P7 616 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 SEPT5Q99719 369 aaPredicted RBP9.68□□□□□ -0.86
PDE4D-201ENST00000309641 LSM14BQ9BX40 385 aaKnown RBP9.68□□□□□ -0.86
PDE4D-201ENST00000309641 NT5C1AQ9BXI3 368 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 OXCT2Q9BYC2 517 aaPredicted RBP9.68□□□□□ -0.86
PDE4D-201ENST00000309641 FAM207AQ9NSI2 230 aaPredicted RBP9.68□□□□□ -0.86
PDE4D-201ENST00000309641 CEP72Q9P209 647 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 YIPF1Q9Y548 306 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 FHOD1Q9Y613 1164 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 A0A1B0GTH6 734 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 AP5Z1O43299 807 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 TBXAS1P24557 533 aaPredicted RBP9.68□□□□□ -0.86
PDE4D-201ENST00000309641 SSTR3P32745 418 aaPredicted RBP9.68□□□□□ -0.86
PDE4D-201ENST00000309641 TWF1Q12792 350 aa9.68□□□□□ -0.86
PDE4D-201ENST00000309641 DDR2Q16832 855 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms