RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 TBC1D7Q9P0N9 293 aa13.14□□□□□ -0.31
TPT1-201ENST00000309246 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.14□□□□□ -0.31
TPT1-201ENST00000309246 PTPRDP23468 1912 aa13.13□□□□□ -0.31
TPT1-201ENST00000309246 SDK1Q7Z5N4 2213 aa13.13□□□□□ -0.31
TPT1-201ENST00000309246 VPS37CA5D8V6 355 aaPredicted RBP13.13□□□□□ -0.31
TPT1-201ENST00000309246 PPP1R37O75864 691 aa13.13□□□□□ -0.31
TPT1-201ENST00000309246 IL18RAPO95256 599 aa13.13□□□□□ -0.31
TPT1-201ENST00000309246 DDIT3P35638 169 aa13.13□□□□□ -0.31
TPT1-201ENST00000309246 KCNA1Q09470 495 aa13.13□□□□□ -0.31
TPT1-201ENST00000309246 SMARCB1Q12824 385 aa13.13□□□□□ -0.31
TPT1-201ENST00000309246 SDHAF4Q5VUM1 108 aa13.13□□□□□ -0.31
TPT1-201ENST00000309246 PKN3Q6P5Z2 889 aa13.13□□□□□ -0.31
TPT1-201ENST00000309246 CEP68Q76N32 757 aa13.13□□□□□ -0.31
TPT1-201ENST00000309246 TMEM150AQ86TG1 271 aa13.13□□□□□ -0.31
TPT1-201ENST00000309246 DCP1BQ8IZD4 617 aaKnown RBP13.13□□□□□ -0.31
TPT1-201ENST00000309246 CMTM8Q8IZV2 173 aa13.13□□□□□ -0.31
TPT1-201ENST00000309246 MAB21L3Q8N8X9 362 aa13.13□□□□□ -0.31
TPT1-201ENST00000309246 ZSWIM2Q8NEG5 633 aa13.13□□□□□ -0.31
TPT1-201ENST00000309246 SAAL1Q96ER3 474 aa13.13□□□□□ -0.31
TPT1-201ENST00000309246 FAM84AQ96KN4 292 aa13.13□□□□□ -0.31
TPT1-201ENST00000309246 ZNF560Q96MR9 790 aa13.13□□□□□ -0.31
TPT1-201ENST00000309246 HPS4Q9NQG7 708 aa13.13□□□□□ -0.31
TPT1-201ENST00000309246 GKN1Q9NS71 199 aa13.13□□□□□ -0.31
TPT1-201ENST00000309246 SEMA4GQ9NTN9 838 aa13.13□□□□□ -0.31
TPT1-201ENST00000309246 THG1LQ9NWX6 298 aaKnown RBP13.13□□□□□ -0.31
TPT1-201ENST00000309246 MAGED2Q9UNF1 606 aaPredicted RBP13.13□□□□□ -0.31
TPT1-201ENST00000309246 CCL26Q9Y258 94 aa13.13□□□□□ -0.31
TPT1-201ENST00000309246 PCDHB5Q9Y5E4 795 aa13.13□□□□□ -0.31
TPT1-201ENST00000309246 CLIC4Q9Y696 253 aa13.13□□□□□ -0.31
TPT1-201ENST00000309246 NCOR2Q9Y618 2525 aa13.13□□□□□ -0.31
TPT1-201ENST00000309246 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.12□□□□□ -0.31
TPT1-201ENST00000309246 MYMKA6NI61 221 aa13.12□□□□□ -0.31
TPT1-201ENST00000309246 EXTL3O43909 919 aa13.12□□□□□ -0.31
TPT1-201ENST00000309246 LRP3O75074 770 aa13.12□□□□□ -0.31
TPT1-201ENST00000309246 PRPF40AO75400 957 aaKnown RBP13.12□□□□□ -0.31
TPT1-201ENST00000309246 F11P03951 625 aa13.12□□□□□ -0.31
TPT1-201ENST00000309246 ITGB3P05106 788 aa13.12□□□□□ -0.31
TPT1-201ENST00000309246 HMGA1P17096 107 aaKnown RBP13.12□□□□□ -0.31
TPT1-201ENST00000309246 POLR2BP30876 1174 aaKnown RBP13.12□□□□□ -0.31
TPT1-201ENST00000309246 CNR2P34972 360 aa13.12□□□□□ -0.31
TPT1-201ENST00000309246 AVPR1AP37288 418 aa13.12□□□□□ -0.31
TPT1-201ENST00000309246 NLRP12P59046 1061 aa13.12□□□□□ -0.31
TPT1-201ENST00000309246 TFAMQ00059 246 aaKnown RBP13.12□□□□□ -0.31
TPT1-201ENST00000309246 TSPY1Q01534 308 aa13.12□□□□□ -0.31
TPT1-201ENST00000309246 POSTNQ15063 836 aa13.12□□□□□ -0.31
TPT1-201ENST00000309246 PTPAQ15257 358 aa13.12□□□□□ -0.31
TPT1-201ENST00000309246 TXNDC8Q6A555 127 aa13.12□□□□□ -0.31
TPT1-201ENST00000309246 SCARA3Q6AZY7 606 aa13.12□□□□□ -0.31
TPT1-201ENST00000309246 TRIM68Q6AZZ1 485 aa13.12□□□□□ -0.31
TPT1-201ENST00000309246 PRR23CQ6ZRP0 262 aa13.12□□□□□ -0.31
TPT1-201ENST00000309246 NT5DC4Q86YG4 428 aa13.12□□□□□ -0.31
TPT1-201ENST00000309246 FAM160A2Q8N612 972 aaPredicted RBP13.12□□□□□ -0.31
TPT1-201ENST00000309246 RIN3Q8TB24 985 aa13.12□□□□□ -0.31
TPT1-201ENST00000309246 NETO1Q8TDF5 533 aa13.12□□□□□ -0.31
TPT1-201ENST00000309246 USP13Q92995 863 aaPredicted RBP13.12□□□□□ -0.31
TPT1-201ENST00000309246 CNTNAP3BQ96NU0 1288 aa13.12□□□□□ -0.31
TPT1-201ENST00000309246 FAM213AQ9BRX8 229 aa13.12□□□□□ -0.31
TPT1-201ENST00000309246 PI4K2AQ9BTU6 479 aa13.12□□□□□ -0.31
TPT1-201ENST00000309246 STRA6Q9BX79 667 aa13.12□□□□□ -0.31
TPT1-201ENST00000309246 CNTNAP3Q9BZ76 1288 aa13.12□□□□□ -0.31
TPT1-201ENST00000309246 EBF3Q9H4W6 596 aa13.12□□□□□ -0.31
TPT1-201ENST00000309246 MRPL44Q9H9J2 332 aaKnown RBP13.12□□□□□ -0.31
TPT1-201ENST00000309246 STK17AQ9UEE5 414 aa13.12□□□□□ -0.31
TPT1-201ENST00000309246 CCDC39Q9UFE4 941 aa13.12□□□□□ -0.31
TPT1-201ENST00000309246 GOLGA8IPA6NC78 632 aa13.11□□□□□ -0.31
TPT1-201ENST00000309246 OTOL1A6NHN0 477 aaPredicted RBP13.11□□□□□ -0.31
TPT1-201ENST00000309246 GOLGA8JA6NMD2 632 aa13.11□□□□□ -0.31
TPT1-201ENST00000309246 GCNT3O95395 438 aa13.11□□□□□ -0.31
TPT1-201ENST00000309246 ACAT1P24752 427 aaKnown RBP13.11□□□□□ -0.31
TPT1-201ENST00000309246 PXNP49023 591 aaPredicted RBP13.11□□□□□ -0.31
TPT1-201ENST00000309246 CASP5P51878 434 aa13.11□□□□□ -0.31
TPT1-201ENST00000309246 POU5F1Q01860 360 aaKnown RBP13.11□□□□□ -0.31
TPT1-201ENST00000309246 BFSP1Q12934 665 aa13.11□□□□□ -0.31
TPT1-201ENST00000309246 RUNX3Q13761 415 aa13.11□□□□□ -0.31
TPT1-201ENST00000309246 CSRP2Q16527 193 aa13.11□□□□□ -0.31
TPT1-201ENST00000309246 CCDC142Q17RM4 750 aa13.11□□□□□ -0.31
TPT1-201ENST00000309246 L1TD1Q5T7N2 865 aaKnown RBP13.11□□□□□ -0.31
TPT1-201ENST00000309246 FSTL4Q6MZW2 842 aa13.11□□□□□ -0.31
TPT1-201ENST00000309246 WDR5BQ86VZ2 330 aa13.11□□□□□ -0.31
TPT1-201ENST00000309246 BRSK2Q8IWQ3 736 aa13.11□□□□□ -0.31
TPT1-201ENST00000309246 SYNPOQ8N3V7 929 aa13.11□□□□□ -0.31
TPT1-201ENST00000309246 PDCL2Q8N4E4 241 aa13.11□□□□□ -0.31
TPT1-201ENST00000309246 C1orf127Q8N9H9 656 aa13.11□□□□□ -0.31
TPT1-201ENST00000309246 NOC3LQ8WTT2 800 aaKnown RBP13.11□□□□□ -0.31
TPT1-201ENST00000309246 DNAJC19Q96DA6 116 aa13.11□□□□□ -0.31
TPT1-201ENST00000309246 CHFRQ96EP1 664 aa13.11□□□□□ -0.31
TPT1-201ENST00000309246 CLIC6Q96NY7 704 aa13.11□□□□□ -0.31
TPT1-201ENST00000309246 ACCSQ96QU6 501 aa13.11□□□□□ -0.31
TPT1-201ENST00000309246 FAM83CQ9BQN1 747 aa13.11□□□□□ -0.31
TPT1-201ENST00000309246 UPF2Q9HAU5 1272 aaKnown RBP13.11□□□□□ -0.31
TPT1-201ENST00000309246 SEL1LQ9UBV2 794 aa13.11□□□□□ -0.31
TPT1-201ENST00000309246 FBXO2Q9UK22 296 aaPredicted RBP13.11□□□□□ -0.31
TPT1-201ENST00000309246 L1RE1Q9UN81 338 aa13.11□□□□□ -0.31
TPT1-201ENST00000309246 AGAP1Q9UPQ3 857 aa13.11□□□□□ -0.31
TPT1-201ENST00000309246 EXOC7Q9UPT5 735 aa13.11□□□□□ -0.31
TPT1-201ENST00000309246 DNAH14Q0VDD8 3507 aa13.11□□□□□ -0.31
TPT1-201ENST00000309246 SLC30A4O14863 429 aa13.1□□□□□ -0.31
TPT1-201ENST00000309246 HCRTO43612 131 aa13.1□□□□□ -0.31
TPT1-201ENST00000309246 GDF9O60383 454 aa13.1□□□□□ -0.31
TPT1-201ENST00000309246 TADA3O75528 432 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms