RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 MICALL2Q8IY33 904 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 RNF169Q8NCN4 708 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 BTBD6Q96KE9 485 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 FAM84AQ96KN4 292 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 HACD3Q9P035 362 aa10.97□□□□□ -0.65
MSRB3-201ENST00000308259 SCAF8Q9UPN6 1271 aaKnown RBP10.97□□□□□ -0.65
MSRB3-201ENST00000308259 UNCXA6NJT0 531 aa10.96□□□□□ -0.65
MSRB3-201ENST00000308259 GOLGA8JA6NMD2 632 aa10.96□□□□□ -0.65
MSRB3-201ENST00000308259 H0YGN5 161 aa10.96□□□□□ -0.65
MSRB3-201ENST00000308259 GOLGA8TH3BQL2 631 aa10.96□□□□□ -0.65
MSRB3-201ENST00000308259 NDUFB10O96000 172 aa10.96□□□□□ -0.65
MSRB3-201ENST00000308259 GH2P01242 217 aa10.96□□□□□ -0.65
MSRB3-201ENST00000308259 CALCAP01258 141 aa10.96□□□□□ -0.65
MSRB3-201ENST00000308259 TFPTP0C1Z6 253 aa10.96□□□□□ -0.65
MSRB3-201ENST00000308259 MSL3P1P0C860 447 aa10.96□□□□□ -0.65
MSRB3-201ENST00000308259 OSBPP22059 807 aa10.96□□□□□ -0.65
MSRB3-201ENST00000308259 DSTYKQ6XUX3 929 aa10.96□□□□□ -0.65
MSRB3-201ENST00000308259 SH3BP5LQ7L8J4 393 aa10.96□□□□□ -0.65
MSRB3-201ENST00000308259 EXOC3L1Q86VI1 746 aa10.96□□□□□ -0.65
MSRB3-201ENST00000308259 FBXO25Q8TCJ0 367 aa10.96□□□□□ -0.65
MSRB3-201ENST00000308259 MTBPQ96DY7 904 aa10.96□□□□□ -0.65
MSRB3-201ENST00000308259 CNBD2Q96M20 576 aa10.96□□□□□ -0.65
MSRB3-201ENST00000308259 AMNQ9BXJ7 453 aa10.96□□□□□ -0.65
MSRB3-201ENST00000308259 ARMC7Q9H6L4 198 aa10.96□□□□□ -0.65
MSRB3-201ENST00000308259 DDX56Q9NY93 547 aaKnown RBP10.96□□□□□ -0.65
MSRB3-201ENST00000308259 WRAP73Q9P2S5 460 aaPredicted RBP10.96□□□□□ -0.65
MSRB3-201ENST00000308259 NFS1Q9Y697 457 aa10.96□□□□□ -0.65
MSRB3-201ENST00000308259 TMEM221A6NGB7 291 aa10.96□□□□□ -0.65
MSRB3-201ENST00000308259 TKTP29401 623 aaKnown RBP10.96□□□□□ -0.65
MSRB3-201ENST00000308259 DLG4P78352 724 aa10.96□□□□□ -0.65
MSRB3-201ENST00000308259 TRIP13Q15645 432 aaPredicted RBP10.96□□□□□ -0.65
MSRB3-201ENST00000308259 ECHDC2Q86YB7 292 aa10.96□□□□□ -0.65
MSRB3-201ENST00000308259 PPP1R14CQ8TAE6 165 aa10.96□□□□□ -0.65
MSRB3-201ENST00000308259 TYW1Q9NV66 732 aaKnown RBP10.96□□□□□ -0.65
MSRB3-201ENST00000308259 MKL2Q9ULH7 1088 aa10.96□□□□□ -0.65
MSRB3-201ENST00000308259 PHTF1Q9UMS5 762 aa10.96□□□□□ -0.65
MSRB3-201ENST00000308259 COG5Q9UP83 839 aa10.96□□□□□ -0.65
MSRB3-201ENST00000308259 MYH4Q9Y623 1939 aa10.96□□□□□ -0.66
MSRB3-201ENST00000308259 B2RBV5 119 aa10.96□□□□□ -0.66
MSRB3-201ENST00000308259 H3BRJ5 948 aa10.96□□□□□ -0.66
MSRB3-201ENST00000308259 GIPC1O14908 333 aa10.96□□□□□ -0.66
MSRB3-201ENST00000308259 TBX10O75333 385 aa10.96□□□□□ -0.66
MSRB3-201ENST00000308259 TUBA1BP68363 451 aa10.96□□□□□ -0.66
MSRB3-201ENST00000308259 IRX4P78413 519 aa10.96□□□□□ -0.66
MSRB3-201ENST00000308259 PLCB3Q01970 1234 aa10.96□□□□□ -0.66
MSRB3-201ENST00000308259 SPARCL1Q14515 664 aa10.96□□□□□ -0.66
MSRB3-201ENST00000308259 RNF19BQ6ZMZ0 732 aa10.96□□□□□ -0.66
MSRB3-201ENST00000308259 TUBA1AQ71U36 451 aa10.96□□□□□ -0.66
MSRB3-201ENST00000308259 CAPSLQ8WWF8 208 aa10.96□□□□□ -0.66
MSRB3-201ENST00000308259 MAML1Q92585 1016 aa10.96□□□□□ -0.66
MSRB3-201ENST00000308259 C18orf8Q96DM3 657 aa10.96□□□□□ -0.66
MSRB3-201ENST00000308259 GPBP1L1Q9HC44 474 aaPredicted RBP10.96□□□□□ -0.66
MSRB3-201ENST00000308259 SMCHD1A6NHR9 2005 aa10.96□□□□□ -0.66
MSRB3-201ENST00000308259 FOXO6A8MYZ6 492 aa10.95□□□□□ -0.66
MSRB3-201ENST00000308259 PDXKO00764 312 aa10.95□□□□□ -0.66
MSRB3-201ENST00000308259 ENO1P06733 434 aaKnown RBP10.95□□□□□ -0.66
MSRB3-201ENST00000308259 GNAZP19086 355 aa10.95□□□□□ -0.66
MSRB3-201ENST00000308259 AP1B1Q10567 949 aa10.95□□□□□ -0.66
MSRB3-201ENST00000308259 PARP6Q2NL67 630 aa10.95□□□□□ -0.66
MSRB3-201ENST00000308259 C15orf52Q6ZUT6 534 aaKnown RBP10.95□□□□□ -0.66
MSRB3-201ENST00000308259 NLRP9Q7RTR0 991 aa10.95□□□□□ -0.66
MSRB3-201ENST00000308259 ACTRT1Q8TDG2 376 aa10.95□□□□□ -0.66
MSRB3-201ENST00000308259 SH3TC2Q8TF17 1288 aa10.95□□□□□ -0.66
MSRB3-201ENST00000308259 ALG3Q92685 438 aa10.95□□□□□ -0.66
MSRB3-201ENST00000308259 KRT35Q92764 455 aa10.95□□□□□ -0.66
MSRB3-201ENST00000308259 KAT5Q92993 513 aa10.95□□□□□ -0.66
MSRB3-201ENST00000308259 GID8Q9NWU2 228 aa10.95□□□□□ -0.66
MSRB3-201ENST00000308259 TMEM150BA6NC51 233 aa10.95□□□□□ -0.66
MSRB3-201ENST00000308259 NOTOA8MTQ0 251 aa10.95□□□□□ -0.66
MSRB3-201ENST00000308259 FOXN3O00409 490 aaPredicted RBP10.95□□□□□ -0.66
MSRB3-201ENST00000308259 FBP2O00757 339 aa10.95□□□□□ -0.66
MSRB3-201ENST00000308259 PORP16435 677 aaPredicted RBP10.95□□□□□ -0.66
MSRB3-201ENST00000308259 CDH3P22223 829 aa10.95□□□□□ -0.66
MSRB3-201ENST00000308259 RRP1BQ14684 758 aaKnown RBP10.95□□□□□ -0.66
MSRB3-201ENST00000308259 BRDTQ58F21 947 aaPredicted RBP10.95□□□□□ -0.66
MSRB3-201ENST00000308259 TJAP1Q5JTD0 557 aa10.95□□□□□ -0.66
MSRB3-201ENST00000308259 TMEM179Q6ZVK1 233 aa10.95□□□□□ -0.66
MSRB3-201ENST00000308259 C1orf131Q8NDD1 294 aaKnown RBP10.95□□□□□ -0.66
MSRB3-201ENST00000308259 WDR18Q9BV38 432 aa10.95□□□□□ -0.66
MSRB3-201ENST00000308259 TDRD3Q9H7E2 651 aaKnown RBP10.95□□□□□ -0.66
MSRB3-201ENST00000308259 PPARGC1AQ9UBK2 798 aaKnown RBP10.95□□□□□ -0.66
MSRB3-201ENST00000308259 MMP13P45452 471 aa10.95□□□□□ -0.66
MSRB3-201ENST00000308259 GMPSP49915 693 aaPredicted RBP10.95□□□□□ -0.66
MSRB3-201ENST00000308259 CNGA3Q16281 694 aa10.95□□□□□ -0.66
MSRB3-201ENST00000308259 ODR4Q5SWX8 454 aa10.95□□□□□ -0.66
MSRB3-201ENST00000308259 SEL1L2Q5TEA6 688 aa10.95□□□□□ -0.66
MSRB3-201ENST00000308259 KRT80Q6KB66 452 aa10.95□□□□□ -0.66
MSRB3-201ENST00000308259 RSPH1Q8WYR4 309 aa10.95□□□□□ -0.66
MSRB3-201ENST00000308259 PRPF18Q99633 342 aaKnown RBP10.95□□□□□ -0.66
MSRB3-201ENST00000308259 ECSITQ9BQ95 431 aa10.95□□□□□ -0.66
MSRB3-201ENST00000308259 LRMDAQ9H2I8 198 aa10.95□□□□□ -0.66
MSRB3-201ENST00000308259 RRN3Q9NYV6 651 aa10.95□□□□□ -0.66
MSRB3-201ENST00000308259 PTTG2Q9NZH5 202 aa10.95□□□□□ -0.66
MSRB3-201ENST00000308259 ABT1Q9ULW3 272 aaKnown RBP10.95□□□□□ -0.66
MSRB3-201ENST00000308259 FADS3Q9Y5Q0 445 aa10.95□□□□□ -0.66
MSRB3-201ENST00000308259 CDK5RAP2Q96SN8 1893 aa10.95□□□□□ -0.66
MSRB3-201ENST00000308259 PITPNM2Q9BZ72 1349 aa10.95□□□□□ -0.66
MSRB3-201ENST00000308259 B3GALNT1O75752 331 aa10.95□□□□□ -0.66
MSRB3-201ENST00000308259 TNFAIP3P21580 790 aa10.95□□□□□ -0.66
MSRB3-201ENST00000308259 CIITAP33076 1130 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms