RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 APEX2Q9UBZ4 518 aa23.82■■□□□ 1.4
HOXD4-201ENST00000306324 DOCK6Q96HP0 2047 aa23.82■■□□□ 1.4
HOXD4-201ENST00000306324 H3BQ06 376 aaPredicted RBP23.81■■□□□ 1.4
HOXD4-201ENST00000306324 CILPO75339 1184 aa23.81■■□□□ 1.4
HOXD4-201ENST00000306324 SEC24AO95486 1093 aa23.81■■□□□ 1.4
HOXD4-201ENST00000306324 C8AP07357 584 aa23.81■■□□□ 1.4
HOXD4-201ENST00000306324 PTPN1P18031 435 aaKnown RBP23.81■■□□□ 1.4
HOXD4-201ENST00000306324 GCNT1Q02742 428 aa23.81■■□□□ 1.4
HOXD4-201ENST00000306324 KCNMA1Q12791 1236 aa23.81■■□□□ 1.4
HOXD4-201ENST00000306324 DUSP4Q13115 394 aa23.81■■□□□ 1.4
HOXD4-201ENST00000306324 CLUL1Q15846 466 aa23.81■■□□□ 1.4
HOXD4-201ENST00000306324 NFE2Q16621 373 aaPredicted RBP23.81■■□□□ 1.4
HOXD4-201ENST00000306324 MDH1BQ5I0G3 518 aa23.81■■□□□ 1.4
HOXD4-201ENST00000306324 ACOT1Q86TX2 421 aa23.81■■□□□ 1.4
HOXD4-201ENST00000306324 C12orf76Q8N812 135 aaPredicted RBP23.81■■□□□ 1.4
HOXD4-201ENST00000306324 B3GALNT2Q8NCR0 500 aa23.81■■□□□ 1.4
HOXD4-201ENST00000306324 HDAC7Q8WUI4 952 aa23.81■■□□□ 1.4
HOXD4-201ENST00000306324 TWNKQ96RR1 684 aa23.81■■□□□ 1.4
HOXD4-201ENST00000306324 PKMYT1Q99640 499 aa23.81■■□□□ 1.4
HOXD4-201ENST00000306324 LPIN3Q9BQK8 851 aa23.81■■□□□ 1.4
HOXD4-201ENST00000306324 NT5C1AQ9BXI3 368 aa23.81■■□□□ 1.4
HOXD4-201ENST00000306324 PRDM6Q9NQX0 595 aa23.81■■□□□ 1.4
HOXD4-201ENST00000306324 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.81■■□□□ 1.4
HOXD4-201ENST00000306324 RFPL2O75678 378 aa23.81■■□□□ 1.4
HOXD4-201ENST00000306324 VNN2O95498 520 aa23.81■■□□□ 1.4
HOXD4-201ENST00000306324 TRIM21P19474 475 aaKnown RBP23.81■■□□□ 1.4
HOXD4-201ENST00000306324 SMARCB1Q12824 385 aa23.81■■□□□ 1.4
HOXD4-201ENST00000306324 MAPRE1Q15691 268 aaKnown RBP23.81■■□□□ 1.4
HOXD4-201ENST00000306324 FAM171BQ6P995 826 aa23.81■■□□□ 1.4
HOXD4-201ENST00000306324 CCDC149Q6ZUS6 474 aa23.81■■□□□ 1.4
HOXD4-201ENST00000306324 LSM14BQ9BX40 385 aaKnown RBP23.81■■□□□ 1.4
HOXD4-201ENST00000306324 SIX2Q9NPC8 291 aa23.81■■□□□ 1.4
HOXD4-201ENST00000306324 COG5Q9UP83 839 aa23.81■■□□□ 1.4
HOXD4-201ENST00000306324 SLC27A5Q9Y2P5 690 aa23.81■■□□□ 1.4
HOXD4-201ENST00000306324 PCDHB5Q9Y5E4 795 aa23.81■■□□□ 1.4
HOXD4-201ENST00000306324 FANCCQ00597 558 aa23.8■■□□□ 1.4
HOXD4-201ENST00000306324 CYP27A1Q02318 531 aa23.8■■□□□ 1.4
HOXD4-201ENST00000306324 PPM1LQ5SGD2 360 aa23.8■■□□□ 1.4
HOXD4-201ENST00000306324 RARS2Q5T160 578 aaKnown RBP23.8■■□□□ 1.4
HOXD4-201ENST00000306324 SPATA2LQ8IUW3 424 aaPredicted RBP23.8■■□□□ 1.4
HOXD4-201ENST00000306324 TCEAL8Q8IYN2 117 aa23.8■■□□□ 1.4
HOXD4-201ENST00000306324 TTC9BQ8N6N2 239 aa23.8■■□□□ 1.4
HOXD4-201ENST00000306324 MYCBPAPQ8TBZ2 947 aa23.8■■□□□ 1.4
HOXD4-201ENST00000306324 SPPL2BQ8TCT7 592 aa23.8■■□□□ 1.4
HOXD4-201ENST00000306324 WHAMMQ8TF30 809 aa23.8■■□□□ 1.4
HOXD4-201ENST00000306324 C2orf15Q8WU43 125 aaKnown RBP23.8■■□□□ 1.4
HOXD4-201ENST00000306324 MYLPFQ96A32 169 aa23.8■■□□□ 1.4
HOXD4-201ENST00000306324 PCMTD1Q96MG8 357 aaPredicted RBP23.8■■□□□ 1.4
HOXD4-201ENST00000306324 KREMEN1Q96MU8 473 aa23.8■■□□□ 1.4
HOXD4-201ENST00000306324 ANP32EQ9BTT0 268 aa23.8■■□□□ 1.4
HOXD4-201ENST00000306324 ELOVL4Q9GZR5 314 aa23.8■■□□□ 1.4
HOXD4-201ENST00000306324 DNAI2Q9GZS0 605 aa23.8■■□□□ 1.4
HOXD4-201ENST00000306324 CRISPLD1Q9H336 500 aa23.8■■□□□ 1.4
HOXD4-201ENST00000306324 FAM124BQ9H5Z6 455 aaPredicted RBP23.8■■□□□ 1.4
HOXD4-201ENST00000306324 SFXN1Q9H9B4 322 aa23.8■■□□□ 1.4
HOXD4-201ENST00000306324 RTN4Q9NQC3 1192 aaKnown RBP23.8■■□□□ 1.4
HOXD4-201ENST00000306324 MAFFQ9ULX9 164 aa23.8■■□□□ 1.4
HOXD4-201ENST00000306324 ZMYND10O75800 440 aa23.79■■□□□ 1.4
HOXD4-201ENST00000306324 HOXB8P17481 243 aaPredicted RBP23.79■■□□□ 1.4
HOXD4-201ENST00000306324 KLK7P49862 253 aa23.79■■□□□ 1.4
HOXD4-201ENST00000306324 MFAP3P55082 362 aa23.79■■□□□ 1.4
HOXD4-201ENST00000306324 SYCP1Q15431 976 aa23.79■■□□□ 1.4
HOXD4-201ENST00000306324 ARHGAP44Q17R89 818 aa23.79■■□□□ 1.4
HOXD4-201ENST00000306324 UVSSAQ2YD98 709 aa23.79■■□□□ 1.4
HOXD4-201ENST00000306324 MGAT5BQ3V5L5 792 aa23.79■■□□□ 1.4
HOXD4-201ENST00000306324 SYCE2Q6PIF2 218 aa23.79■■□□□ 1.4
HOXD4-201ENST00000306324 TMC5Q6UXY8 1006 aa23.79■■□□□ 1.4
HOXD4-201ENST00000306324 C4orf50Q6ZRC1 276 aa23.79■■□□□ 1.4
HOXD4-201ENST00000306324 PCED1BQ96HM7 432 aa23.79■■□□□ 1.4
HOXD4-201ENST00000306324 NAP1L5Q96NT1 182 aaPredicted RBP23.79■■□□□ 1.4
HOXD4-201ENST00000306324 SEPT5Q99719 369 aaPredicted RBP23.79■■□□□ 1.4
HOXD4-201ENST00000306324 PCDHB4Q9Y5E5 795 aa23.79■■□□□ 1.4
HOXD4-201ENST00000306324 INSL5Q9Y5Q6 135 aa23.79■■□□□ 1.4
HOXD4-201ENST00000306324 CCDC195A0A1B0GUA6 201 aa23.78■■□□□ 1.4
HOXD4-201ENST00000306324 TEX33O43247 280 aa23.78■■□□□ 1.4
HOXD4-201ENST00000306324 TMEM270Q6UE05 265 aa23.78■■□□□ 1.4
HOXD4-201ENST00000306324 ENOSF1Q7L5Y1 443 aa23.78■■□□□ 1.4
HOXD4-201ENST00000306324 CRYBG2Q8N1P7 616 aa23.78■■□□□ 1.4
HOXD4-201ENST00000306324 UBR7Q8N806 425 aa23.78■■□□□ 1.4
HOXD4-201ENST00000306324 MSLNLQ96KJ4 702 aa23.78■■□□□ 1.4
HOXD4-201ENST00000306324 FAM81BQ96LP2 452 aa23.78■■□□□ 1.4
HOXD4-201ENST00000306324 CD207Q9UJ71 328 aa23.78■■□□□ 1.4
HOXD4-201ENST00000306324 DNAJC12Q9UKB3 198 aa23.78■■□□□ 1.4
HOXD4-201ENST00000306324 A0A1B0GTH6 734 aa23.77■■□□□ 1.4
HOXD4-201ENST00000306324 LRG1P02750 347 aa23.77■■□□□ 1.4
HOXD4-201ENST00000306324 KLHDC7AQ5VTJ3 777 aa23.77■■□□□ 1.4
HOXD4-201ENST00000306324 C12orf29Q8N999 325 aa23.77■■□□□ 1.4
HOXD4-201ENST00000306324 TMEM176AQ96HP8 235 aa23.77■■□□□ 1.4
HOXD4-201ENST00000306324 RHOBTB2Q9BYZ6 727 aa23.77■■□□□ 1.4
HOXD4-201ENST00000306324 FAM207AQ9NSI2 230 aaPredicted RBP23.77■■□□□ 1.4
HOXD4-201ENST00000306324 FAM49BQ9NUQ9 324 aa23.77■■□□□ 1.4
HOXD4-201ENST00000306324 ZDHHC7Q9NXF8 308 aa23.77■■□□□ 1.4
HOXD4-201ENST00000306324 YIPF1Q9Y548 306 aa23.77■■□□□ 1.4
HOXD4-201ENST00000306324 CCL16O15467 120 aa23.76■■□□□ 1.39
HOXD4-201ENST00000306324 SOAT2O75908 522 aa23.76■■□□□ 1.39
HOXD4-201ENST00000306324 KRT5P13647 590 aa23.76■■□□□ 1.39
HOXD4-201ENST00000306324 ACO1P21399 889 aaKnown RBP23.76■■□□□ 1.39
HOXD4-201ENST00000306324 CYP2F1P24903 491 aa23.76■■□□□ 1.39
HOXD4-201ENST00000306324 RAD23BP54727 409 aa23.76■■□□□ 1.39
HOXD4-201ENST00000306324 UBASH3AP57075 661 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms