RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 COPS7BQ9H9Q2 264 aaPredicted RBP13.91□□□□□ -0.18
TRIM56-201ENST00000306085 DKK3Q9UBP4 350 aa13.91□□□□□ -0.18
TRIM56-201ENST00000306085 EIF3LQ9Y262 564 aaKnown RBP13.91□□□□□ -0.18
TRIM56-201ENST00000306085 APBA3O96018 575 aa13.91□□□□□ -0.18
TRIM56-201ENST00000306085 DGKDQ16760 1214 aa13.91□□□□□ -0.18
TRIM56-201ENST00000306085 GATAD2AQ86YP4 633 aa13.91□□□□□ -0.18
TRIM56-201ENST00000306085 RMND5BQ96G75 393 aaPredicted RBP13.91□□□□□ -0.18
TRIM56-201ENST00000306085 SMCO3A2RU48 225 aa13.91□□□□□ -0.18
TRIM56-201ENST00000306085 KHDRBS3O75525 346 aaKnown RBP13.91□□□□□ -0.18
TRIM56-201ENST00000306085 KPNA1P52294 538 aaPredicted RBP13.91□□□□□ -0.18
TRIM56-201ENST00000306085 ZCCHC7Q8N3Z6 543 aaKnown RBP13.91□□□□□ -0.18
TRIM56-201ENST00000306085 SLITRK2Q9H156 845 aa13.91□□□□□ -0.18
TRIM56-201ENST00000306085 MAFFQ9ULX9 164 aa13.91□□□□□ -0.18
TRIM56-201ENST00000306085 SEMA3EO15041 775 aa13.91□□□□□ -0.18
TRIM56-201ENST00000306085 SKAP2O75563 359 aaPredicted RBP13.91□□□□□ -0.18
TRIM56-201ENST00000306085 SNUPNO95149 360 aaKnown RBP13.91□□□□□ -0.18
TRIM56-201ENST00000306085 LSP1P33241 339 aa13.91□□□□□ -0.18
TRIM56-201ENST00000306085 NEDD8Q15843 81 aa13.91□□□□□ -0.18
TRIM56-201ENST00000306085 ERMARDQ5T6L9 678 aa13.91□□□□□ -0.18
TRIM56-201ENST00000306085 C3orf62Q6ZUJ4 267 aa13.91□□□□□ -0.18
TRIM56-201ENST00000306085 CCDC17Q96LX7 622 aa13.91□□□□□ -0.18
TRIM56-201ENST00000306085 PPP1R37O75864 691 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 CHRM3P20309 590 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 CYP2C19P33261 490 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 WDR60Q8WVS4 1066 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 DCUN1D5Q9BTE7 237 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 C14orf93Q9H972 538 aaKnown RBP13.9□□□□□ -0.18
TRIM56-201ENST00000306085 KIAA1586Q9HCI6 787 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 TLR7Q9NYK1 1049 aaKnown RBP13.9□□□□□ -0.18
TRIM56-201ENST00000306085 ZNF185O15231 689 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 C2CD6Q53TS8 623 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 TMC4Q7Z404 712 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 KCTD14Q9BQ13 255 aaPredicted RBP13.9□□□□□ -0.18
TRIM56-201ENST00000306085 TMEM120BA0PK00 339 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 IREB2P48200 963 aaKnown RBP13.9□□□□□ -0.18
TRIM56-201ENST00000306085 GLYCTKQ8IVS8 523 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 CLYBLQ8N0X4 340 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 RMND5AQ9H871 391 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 PHF11Q9UIL8 331 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 IFT140Q96RY7 1462 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 CCT8L1PA6NM43 557 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 TAF2Q6P1X5 1199 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 GIMAP8Q8ND71 665 aaPredicted RBP13.9□□□□□ -0.18
TRIM56-201ENST00000306085 ATL2Q8NHH9 583 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 TNIP3Q96KP6 325 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 NOD2Q9HC29 1040 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 SLC9A8Q9Y2E8 581 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 NEU2Q9Y3R4 380 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 H2AFYO75367 372 aaKnown RBP13.9□□□□□ -0.18
TRIM56-201ENST00000306085 CLUP10909 449 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 RESP18Q5W5W9 173 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 PPP1R14BQ96C90 147 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 DDX18Q9NVP1 670 aaKnown RBP13.9□□□□□ -0.18
TRIM56-201ENST00000306085 USP17L3A6NCW0 530 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 USP17L4A6NCW7 530 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 ERVK-10P10266 1014 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 CASP4P49662 377 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 ARHGDIBP52566 201 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 USP17L1Q7RTZ2 530 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 ZNF438Q7Z4V0 828 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 B3GALNT2Q8NCR0 500 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 DUSP12Q9UNI6 340 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 hCG_1984214I3L0E3 225 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 TBC1D12O60347 775 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 POLBP06746 335 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 SERPINB9P50453 376 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 MROH9Q5TGP6 573 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 ZNF713Q8N859 430 aaPredicted RBP13.9□□□□□ -0.18
TRIM56-201ENST00000306085 TPD52L3Q96J77 140 aa13.9□□□□□ -0.18
TRIM56-201ENST00000306085 COASYQ13057 564 aa13.9□□□□□ -0.19
TRIM56-201ENST00000306085 SYDE1Q6ZW31 735 aaPredicted RBP13.9□□□□□ -0.19
TRIM56-201ENST00000306085 SLC9A6Q92581 669 aa13.9□□□□□ -0.19
TRIM56-201ENST00000306085 ARHGEF26Q96DR7 871 aa13.9□□□□□ -0.19
TRIM56-201ENST00000306085 ZNF333Q96JL9 665 aa13.9□□□□□ -0.19
TRIM56-201ENST00000306085 CATSPER2Q96P56 530 aa13.9□□□□□ -0.19
TRIM56-201ENST00000306085 MCEEQ96PE7 176 aa13.9□□□□□ -0.19
TRIM56-201ENST00000306085 CAMKK2Q96RR4 588 aa13.9□□□□□ -0.19
TRIM56-201ENST00000306085 PEX5P50542 639 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 ADRM1Q16186 407 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 LLGL2Q6P1M3 1020 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 MYH7P12883 1935 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 OR6B1O95007 311 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 BYSLQ13895 437 aaKnown RBP13.89□□□□□ -0.19
TRIM56-201ENST00000306085 EFL1Q7Z2Z2 1120 aaKnown RBP13.89□□□□□ -0.19
TRIM56-201ENST00000306085 RUBCNQ92622 972 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 PNMA3Q9UL41 463 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 PSIP1O75475 530 aaKnown RBP13.89□□□□□ -0.19
TRIM56-201ENST00000306085 SDE2Q6IQ49 451 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 UNC13DQ70J99 1090 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 LGR6Q9HBX8 967 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 FKBP14Q9NWM8 211 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 MCUBQ9NWR8 336 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 POTEMA6NI47 508 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 KPNA5O15131 536 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 KPNA6O60684 536 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 CDH16O75309 829 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 BAIAP3O94812 1187 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 POU5F1Q01860 360 aaKnown RBP13.89□□□□□ -0.19
TRIM56-201ENST00000306085 PADI6Q6TGC4 694 aa13.89□□□□□ -0.19
TRIM56-201ENST00000306085 CNKSR1Q969H4 720 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms