RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 CYP3A4P08684 503 aa12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 ZNF18P17022 549 aa12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 GJA9P57773 515 aa12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 BFSP2Q13515 415 aa12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 TMEM154Q6P9G4 183 aa12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 OR9Q1Q8NGQ5 310 aa12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 KCNH7Q9NS40 1196 aa12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 ICAM3P32942 547 aa12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 TRIM32Q13049 653 aa12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 CYLC2Q14093 348 aaPredicted RBP12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 CDO1Q16878 200 aa12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 WDR93Q6P2C0 686 aa12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 SCARA5Q6ZMJ2 495 aa12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 NOA1Q8NC60 698 aaKnown RBP12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 ERP27Q96DN0 273 aa12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 PAWRQ96IZ0 340 aaKnown RBP12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 INPP4AQ96PE3 977 aaPredicted RBP12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 MTRQ99707 1265 aa12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 TRIM9Q9C026 710 aa12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 TBC1D23Q9NUY8 699 aa12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 ERAP1Q9NZ08 941 aa12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 AKT3Q9Y243 479 aa12.41□□□□□ -0.42
SYNGAP1-201ENST00000293748 F8W8V4 182 aa12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 KDM1AO60341 852 aa12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 ZNF865P0CJ78 1059 aaPredicted RBP12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 PLA2G4AP47712 749 aa12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 SLC26A2P50443 739 aa12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 GHRHRQ02643 423 aa12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 TSTA3Q13630 321 aaPredicted RBP12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 CELF3Q5SZQ8 465 aaKnown RBP12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 DAB2IPQ5VWQ8 1189 aa12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 PIGOQ8TEQ8 1089 aa12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 C1orf54Q8WWF1 131 aa12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 FAM193BQ96PV7 902 aaPredicted RBP12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 FUT8Q9BYC5 575 aa12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 ZNF302Q9NR11 478 aa12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 RBM12Q9NTZ6 932 aaKnown RBP12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 SATB2Q9UPW6 733 aa12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 PCDHA10Q9Y5I2 948 aa12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 CCDC195A0A1B0GUA6 201 aa12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 RRN3P2A6NIE6 340 aa12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 ZNF189O75820 626 aaPredicted RBP12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 TYK2P29597 1187 aa12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 TAP1Q03518 808 aa12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 ZNF746Q6NUN9 644 aaPredicted RBP12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 PADI6Q6TGC4 694 aa12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 TMEM270Q6UE05 265 aa12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 ZNF710Q8N1W2 664 aa12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 MTBPQ96DY7 904 aa12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 PURBQ96QR8 312 aaKnown RBP12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 APOL6Q9BWW8 343 aa12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 ISCUQ9H1K1 167 aa12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 UVRAGQ9P2Y5 699 aa12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 HEY1Q9Y5J3 304 aa12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 UBIAD1Q9Y5Z9 338 aa12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 PDXKO00764 312 aa12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 BCAR1P56945 870 aa12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 FLOT2Q14254 428 aa12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 LY6KQ17RY6 165 aa12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 CDKL3Q8IVW4 592 aaPredicted RBP12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 DTX3LQ8TDB6 740 aa12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 DACH2Q96NX9 599 aa12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 TSSK1BQ9BXA7 367 aa12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 MRGBPQ9NV56 204 aa12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 FLRT1Q9NZU1 646 aa12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 UBE4BO95155 1302 aa12.4□□□□□ -0.42
SYNGAP1-201ENST00000293748 POTEB3A0JP26 581 aa12.4□□□□□ -0.43
SYNGAP1-201ENST00000293748 SPATA31C2B4DYI2 1134 aa12.4□□□□□ -0.43
SYNGAP1-201ENST00000293748 SMPD1P17405 629 aa12.4□□□□□ -0.43
SYNGAP1-201ENST00000293748 EDNRBP24530 442 aa12.4□□□□□ -0.43
SYNGAP1-201ENST00000293748 SEC24CP53992 1094 aa12.4□□□□□ -0.43
SYNGAP1-201ENST00000293748 KCNA10Q16322 511 aa12.4□□□□□ -0.43
SYNGAP1-201ENST00000293748 ZBTB41Q5SVQ8 909 aa12.4□□□□□ -0.43
SYNGAP1-201ENST00000293748 POTEBQ6S5H4 581 aa12.4□□□□□ -0.43
SYNGAP1-201ENST00000293748 ZBTB33Q86T24 672 aa12.4□□□□□ -0.43
SYNGAP1-201ENST00000293748 KIRREL3Q8IZU9 778 aa12.4□□□□□ -0.43
SYNGAP1-201ENST00000293748 TTC8Q8TAM2 541 aa12.4□□□□□ -0.43
SYNGAP1-201ENST00000293748 AGPAT1Q99943 283 aa12.4□□□□□ -0.43
SYNGAP1-201ENST00000293748 SLC13A1Q9BZW2 595 aa12.4□□□□□ -0.43
SYNGAP1-201ENST00000293748 CCDC134Q9H6E4 229 aa12.4□□□□□ -0.43
SYNGAP1-201ENST00000293748 TMEM39AQ9NV64 488 aa12.4□□□□□ -0.43
SYNGAP1-201ENST00000293748 ATP8B3O60423 1300 aa12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 PIK3R2O00459 728 aa12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 RTN2O75298 545 aa12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 IFNA8P32881 189 aa12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 STAT5BP51692 787 aa12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 ROR1Q01973 937 aa12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 KDM7AQ6ZMT4 941 aa12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 RIBC1Q8N443 379 aaPredicted RBP12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 PBXIP1Q96AQ6 731 aa12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 NOD2Q9HC29 1040 aa12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 PDGFCQ9NRA1 345 aa12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 PKD2L2Q9NZM6 624 aa12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 RHOBTB3O94955 611 aa12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 RAG1P15918 1043 aa12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 ACADSP16219 412 aa12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 UBA1P22314 1058 aaKnown RBP12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 SDC4P31431 198 aa12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 TRPC1P48995 793 aa12.39□□□□□ -0.43
SYNGAP1-201ENST00000293748 ARSEP51690 589 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms