RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 VPS11Q9H270 941 aa15.39■□□□□ 0.05
SEC16A-202ENST00000290037 GYPCP04921 128 aa15.39■□□□□ 0.05
SEC16A-202ENST00000290037 MRPL28Q13084 256 aaKnown RBP15.39■□□□□ 0.05
SEC16A-202ENST00000290037 EMC2Q15006 297 aa15.39■□□□□ 0.05
SEC16A-202ENST00000290037 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.39■□□□□ 0.05
SEC16A-202ENST00000290037 UBQLN1Q9UMX0 589 aaKnown RBP15.39■□□□□ 0.05
SEC16A-202ENST00000290037 ROBO3Q96MS0 1386 aa15.39■□□□□ 0.05
SEC16A-202ENST00000290037 H2AFXP16104 143 aaPredicted RBP15.39■□□□□ 0.05
SEC16A-202ENST00000290037 GEMP55040 296 aa15.39■□□□□ 0.05
SEC16A-202ENST00000290037 SPATA18Q8TC71 538 aa15.39■□□□□ 0.05
SEC16A-202ENST00000290037 ARHGEF1Q92888 912 aaKnown RBP15.39■□□□□ 0.05
SEC16A-202ENST00000290037 HEY1Q9Y5J3 304 aa15.39■□□□□ 0.05
SEC16A-202ENST00000290037 RABGAP1LQ5R372 815 aa15.39■□□□□ 0.05
SEC16A-202ENST00000290037 NOA1Q8NC60 698 aaKnown RBP15.39■□□□□ 0.05
SEC16A-202ENST00000290037 EFCAB1Q9HAE3 211 aa15.39■□□□□ 0.05
SEC16A-202ENST00000290037 DISP2A7MBM2 1401 aa15.39■□□□□ 0.05
SEC16A-202ENST00000290037 LOXHD1Q8IVV2 1947 aa15.39■□□□□ 0.05
SEC16A-202ENST00000290037 SDR42E2A6NKP2 422 aa15.39■□□□□ 0.05
SEC16A-202ENST00000290037 SLC16A4O15374 487 aa15.39■□□□□ 0.05
SEC16A-202ENST00000290037 CYP11B2P19099 503 aa15.39■□□□□ 0.05
SEC16A-202ENST00000290037 SLC16A2P36021 539 aa15.39■□□□□ 0.05
SEC16A-202ENST00000290037 ZW10O43264 779 aa15.39■□□□□ 0.05
SEC16A-202ENST00000290037 BCAT1P54687 386 aa15.39■□□□□ 0.05
SEC16A-202ENST00000290037 DGKDQ16760 1214 aa15.39■□□□□ 0.05
SEC16A-202ENST00000290037 CDKAL1Q5VV42 579 aa15.39■□□□□ 0.05
SEC16A-202ENST00000290037 TRPA1O75762 1119 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 PTK7Q13308 1070 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 CROCCP3Q8IVE0 287 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 TRPC4APQ8TEL6 797 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 PCDH9Q9HC56 1237 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 SYTL2Q9HCH5 934 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 TBX20Q9UMR3 447 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 ADCY3O60266 1144 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 PAEPP09466 180 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 RAP1GDS1P52306 607 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 DYNLL2Q96FJ2 89 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 KIF12Q96FN5 646 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 ARMC7Q9H6L4 198 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 PEX19P40855 299 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 MAGEA4P43358 317 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 PDAP1Q13442 181 aaKnown RBP15.38■□□□□ 0.05
SEC16A-202ENST00000290037 WDR49Q8IV35 697 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 PIGOQ8TEQ8 1089 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 TRHDEQ9UKU6 1024 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 RAB21Q9UL25 225 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 SPACA6W5XKT8 324 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 NMT2O60551 498 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 CAPN12Q6ZSI9 719 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 MYLK4Q86YV6 388 aaPredicted RBP15.38■□□□□ 0.05
SEC16A-202ENST00000290037 SPATA2LQ8IUW3 424 aaPredicted RBP15.38■□□□□ 0.05
SEC16A-202ENST00000290037 SLC7A14Q8TBB6 771 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 EME1Q96AY2 570 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 RMDN2Q96LZ7 410 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 SLITRK1Q96PX8 696 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 DDX47Q9H0S4 455 aaKnown RBP15.38■□□□□ 0.05
SEC16A-202ENST00000290037 RXFP1Q9HBX9 757 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 KCNN4O15554 427 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 POLE2P56282 527 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 HIST2H2ACQ16777 129 aaPredicted RBP15.38■□□□□ 0.05
SEC16A-202ENST00000290037 HIST2H2AA3Q6FI13 130 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 GLYCTKQ8IVS8 523 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 VPS50Q96JG6 964 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 REEP2Q9BRK0 252 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 SLC39A8Q9C0K1 460 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 ZNF263O14978 683 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 NDUFS3O75489 264 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 RARBP10826 455 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 LHX1P48742 406 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 KCNK10P57789 538 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 MSLNQ13421 630 aaPredicted RBP15.38■□□□□ 0.05
SEC16A-202ENST00000290037 KYAT3Q6YP21 454 aaKnown RBP15.38■□□□□ 0.05
SEC16A-202ENST00000290037 CASP10Q92851 521 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 DHX35Q9H5Z1 703 aaKnown RBP15.38■□□□□ 0.05
SEC16A-202ENST00000290037 UBR1Q8IWV7 1749 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 TLR2O60603 784 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 DRG2P55039 364 aaKnown RBP15.38■□□□□ 0.05
SEC16A-202ENST00000290037 XIAPP98170 497 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 LRRC38Q5VT99 294 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 SLC13A5Q86YT5 568 aaPredicted RBP15.38■□□□□ 0.05
SEC16A-202ENST00000290037 CTNNAL1Q9UBT7 734 aa15.38■□□□□ 0.05
SEC16A-202ENST00000290037 SHPRHQ149N8 1683 aa15.37■□□□□ 0.05
SEC16A-202ENST00000290037 HOXA13P31271 388 aaPredicted RBP15.37■□□□□ 0.05
SEC16A-202ENST00000290037 SLC20A2Q08357 652 aa15.37■□□□□ 0.05
SEC16A-202ENST00000290037 SRBD1Q8N5C6 995 aaKnown RBP15.37■□□□□ 0.05
SEC16A-202ENST00000290037 ATP6V0D2Q8N8Y2 350 aa15.37■□□□□ 0.05
SEC16A-202ENST00000290037 PARD3BQ8TEW8 1205 aa15.37■□□□□ 0.05
SEC16A-202ENST00000290037 SREBF2Q12772 1141 aa15.37■□□□□ 0.05
SEC16A-202ENST00000290037 HDAC7Q8WUI4 952 aa15.37■□□□□ 0.05
SEC16A-202ENST00000290037 PARVBQ9HBI1 364 aa15.37■□□□□ 0.05
SEC16A-202ENST00000290037 C2orf81A6NN90 581 aa15.37■□□□□ 0.05
SEC16A-202ENST00000290037 PTGISQ16647 500 aa15.37■□□□□ 0.05
SEC16A-202ENST00000290037 ZBTB33Q86T24 672 aa15.37■□□□□ 0.05
SEC16A-202ENST00000290037 KCNQ5Q9NR82 932 aa15.37■□□□□ 0.05
SEC16A-202ENST00000290037 CHN1P15882 459 aa15.37■□□□□ 0.05
SEC16A-202ENST00000290037 COILP38432 576 aaPredicted RBP15.37■□□□□ 0.05
SEC16A-202ENST00000290037 NAGPAQ9UK23 515 aa15.37■□□□□ 0.05
SEC16A-202ENST00000290037 NALCNQ8IZF0 1738 aa15.37■□□□□ 0.05
SEC16A-202ENST00000290037 PNMA8CA0A1B0GUJ8 204 aa15.37■□□□□ 0.05
SEC16A-202ENST00000290037 SKIV2L2P42285 1042 aaKnown RBP15.37■□□□□ 0.05
SEC16A-202ENST00000290037 WRNIP1Q96S55 665 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms