RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 KIAA1841Q6NSI8 718 aa23.19■■□□□ 1.3
PDLIM3-203ENST00000284771 FAM171BQ6P995 826 aa23.19■■□□□ 1.3
PDLIM3-203ENST00000284771 ANKS3Q6ZW76 656 aa23.19■■□□□ 1.3
PDLIM3-203ENST00000284771 POF1BQ8WVV4 589 aa23.19■■□□□ 1.3
PDLIM3-203ENST00000284771 TNIP3Q96KP6 325 aa23.19■■□□□ 1.3
PDLIM3-203ENST00000284771 ZNF830Q96NB3 372 aaPredicted RBP23.19■■□□□ 1.3
PDLIM3-203ENST00000284771 SLC28A3Q9HAS3 691 aa23.19■■□□□ 1.3
PDLIM3-203ENST00000284771 FAM49BQ9NUQ9 324 aa23.19■■□□□ 1.3
PDLIM3-203ENST00000284771 LZTS1Q9Y250 596 aa23.19■■□□□ 1.3
PDLIM3-203ENST00000284771 CD19P15391 556 aa23.19■■□□□ 1.3
PDLIM3-203ENST00000284771 BPIFB4P59827 614 aa23.19■■□□□ 1.3
PDLIM3-203ENST00000284771 INTS6LQ5JSJ4 861 aaKnown RBP23.19■■□□□ 1.3
PDLIM3-203ENST00000284771 TAF3Q5VWG9 929 aa23.19■■□□□ 1.3
PDLIM3-203ENST00000284771 PAQR9Q6ZVX9 377 aa23.19■■□□□ 1.3
PDLIM3-203ENST00000284771 SAMD11Q96NU1 681 aa23.19■■□□□ 1.3
PDLIM3-203ENST00000284771 BAG1Q99933 345 aaPredicted RBP23.19■■□□□ 1.3
PDLIM3-203ENST00000284771 CLSTN3Q9BQT9 956 aa23.19■■□□□ 1.3
PDLIM3-203ENST00000284771 C11orf84Q9BUA3 381 aaPredicted RBP23.19■■□□□ 1.3
PDLIM3-203ENST00000284771 MTRRQ9UBK8 725 aa23.19■■□□□ 1.3
PDLIM3-203ENST00000284771 PUF60Q9UHX1 559 aaKnown RBP23.19■■□□□ 1.3
PDLIM3-203ENST00000284771 EPOPA6NHQ4 379 aa23.18■■□□□ 1.3
PDLIM3-203ENST00000284771 H3BNC9 293 aa23.18■■□□□ 1.3
PDLIM3-203ENST00000284771 THAP12O43422 761 aa23.18■■□□□ 1.3
PDLIM3-203ENST00000284771 MMEP08473 750 aa23.18■■□□□ 1.3
PDLIM3-203ENST00000284771 CCDC172P0C7W6 258 aa23.18■■□□□ 1.3
PDLIM3-203ENST00000284771 CTSAP10619 480 aa23.18■■□□□ 1.3
PDLIM3-203ENST00000284771 VDRP11473 427 aa23.18■■□□□ 1.3
PDLIM3-203ENST00000284771 PDE6CP51160 858 aa23.18■■□□□ 1.3
PDLIM3-203ENST00000284771 PSMD5Q16401 504 aa23.18■■□□□ 1.3
PDLIM3-203ENST00000284771 ASTE1Q2TB18 679 aaPredicted RBP23.18■■□□□ 1.3
PDLIM3-203ENST00000284771 ZNF280DQ6N043 979 aa23.18■■□□□ 1.3
PDLIM3-203ENST00000284771 PALB2Q86YC2 1186 aa23.18■■□□□ 1.3
PDLIM3-203ENST00000284771 FMNL3Q8IVF7 1028 aa23.18■■□□□ 1.3
PDLIM3-203ENST00000284771 CYFIP2Q96F07 1278 aa23.18■■□□□ 1.3
PDLIM3-203ENST00000284771 ZCWPW1Q9H0M4 648 aa23.18■■□□□ 1.3
PDLIM3-203ENST00000284771 KCNF1Q9H3M0 494 aa23.18■■□□□ 1.3
PDLIM3-203ENST00000284771 ZNHIT6Q9NWK9 470 aaKnown RBP23.18■■□□□ 1.3
PDLIM3-203ENST00000284771 TRANK1O15050 2925 aa23.17■■□□□ 1.3
PDLIM3-203ENST00000284771 O00370 1275 aa23.17■■□□□ 1.3
PDLIM3-203ENST00000284771 PTMAP06454 111 aaKnown RBP23.17■■□□□ 1.3
PDLIM3-203ENST00000284771 CCDC130P13994 396 aa23.17■■□□□ 1.3
PDLIM3-203ENST00000284771 EIF4A3P38919 411 aaKnown RBP23.17■■□□□ 1.3
PDLIM3-203ENST00000284771 CCZ1BP86790 482 aa23.17■■□□□ 1.3
PDLIM3-203ENST00000284771 CCZ1P86791 482 aaPredicted RBP23.17■■□□□ 1.3
PDLIM3-203ENST00000284771 FMO1Q01740 532 aa23.17■■□□□ 1.3
PDLIM3-203ENST00000284771 PTPN14Q15678 1187 aa23.17■■□□□ 1.3
PDLIM3-203ENST00000284771 LRIT3Q3SXY7 679 aa23.17■■□□□ 1.3
PDLIM3-203ENST00000284771 SGO2Q562F6 1265 aa23.17■■□□□ 1.3
PDLIM3-203ENST00000284771 TDRD12Q587J7 1177 aaKnown RBP23.17■■□□□ 1.3
PDLIM3-203ENST00000284771 MDH1BQ5I0G3 518 aa23.17■■□□□ 1.3
PDLIM3-203ENST00000284771 FUKQ8N0W3 1084 aa23.17■■□□□ 1.3
PDLIM3-203ENST00000284771 FBXO22Q8NEZ5 403 aa23.17■■□□□ 1.3
PDLIM3-203ENST00000284771 MYCBPAPQ8TBZ2 947 aa23.17■■□□□ 1.3
PDLIM3-203ENST00000284771 TIFAQ96CG3 184 aa23.17■■□□□ 1.3
PDLIM3-203ENST00000284771 PCED1BQ96HM7 432 aa23.17■■□□□ 1.3
PDLIM3-203ENST00000284771 PCDHB18PQ96TA0 734 aa23.17■■□□□ 1.3
PDLIM3-203ENST00000284771 AGPAT1Q99943 283 aa23.17■■□□□ 1.3
PDLIM3-203ENST00000284771 NHEJ1Q9H9Q4 299 aaPredicted RBP23.17■■□□□ 1.3
PDLIM3-203ENST00000284771 KIAA1257Q9ULG3 409 aa23.17■■□□□ 1.3
PDLIM3-203ENST00000284771 PCDHGC5Q9Y5F6 944 aa23.17■■□□□ 1.3
PDLIM3-203ENST00000284771 BACE2Q9Y5Z0 518 aa23.17■■□□□ 1.3
PDLIM3-203ENST00000284771 BZW2Q9Y6E2 419 aaKnown RBP23.17■■□□□ 1.3
PDLIM3-203ENST00000284771 CDY1Q9Y6F8 540 aa23.17■■□□□ 1.3
PDLIM3-203ENST00000284771 SZT2Q5T011 3432 aa23.17■■□□□ 1.3
PDLIM3-203ENST00000284771 SOWAHDA6NJG2 315 aa23.16■■□□□ 1.3
PDLIM3-203ENST00000284771 URODP06132 367 aa23.16■■□□□ 1.3
PDLIM3-203ENST00000284771 CDR2Q01850 454 aa23.16■■□□□ 1.3
PDLIM3-203ENST00000284771 MAPK8IP2Q13387 824 aaPredicted RBP23.16■■□□□ 1.3
PDLIM3-203ENST00000284771 SLC8B1Q6J4K2 584 aa23.16■■□□□ 1.3
PDLIM3-203ENST00000284771 ARNTL2Q8WYA1 636 aa23.16■■□□□ 1.3
PDLIM3-203ENST00000284771 TCF25Q9BQ70 676 aa23.16■■□□□ 1.3
PDLIM3-203ENST00000284771 STK39Q9UEW8 545 aa23.16■■□□□ 1.3
PDLIM3-203ENST00000284771 A0A1W2PPC1 479 aa23.16■■□□□ 1.3
PDLIM3-203ENST00000284771 H7C4K7 107 aa23.16■■□□□ 1.3
PDLIM3-203ENST00000284771 CLDN5O00501 218 aa23.16■■□□□ 1.3
PDLIM3-203ENST00000284771 CSPG5O95196 566 aa23.16■■□□□ 1.3
PDLIM3-203ENST00000284771 IRS1P35568 1242 aa23.16■■□□□ 1.3
PDLIM3-203ENST00000284771 GPM6BQ13491 265 aa23.16■■□□□ 1.3
PDLIM3-203ENST00000284771 MTF1Q14872 753 aa23.16■■□□□ 1.3
PDLIM3-203ENST00000284771 CNGA2Q16280 664 aa23.16■■□□□ 1.3
PDLIM3-203ENST00000284771 ARHGAP17Q68EM7 881 aa23.16■■□□□ 1.3
PDLIM3-203ENST00000284771 TMC7Q7Z402 723 aa23.16■■□□□ 1.3
PDLIM3-203ENST00000284771 GLYCTKQ8IVS8 523 aa23.16■■□□□ 1.3
PDLIM3-203ENST00000284771 SLC2A14Q8TDB8 520 aa23.16■■□□□ 1.3
PDLIM3-203ENST00000284771 B3GNT5Q9BYG0 378 aa23.16■■□□□ 1.3
PDLIM3-203ENST00000284771 MRPL17Q9NRX2 175 aaKnown RBP23.16■■□□□ 1.3
PDLIM3-203ENST00000284771 ADAMTS1Q9UHI8 967 aa23.16■■□□□ 1.3
PDLIM3-203ENST00000284771 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.16■■□□□ 1.3
PDLIM3-203ENST00000284771 OR6C75A6NL08 312 aa23.15■■□□□ 1.3
PDLIM3-203ENST00000284771 DDX3XO00571 662 aaKnown RBP eCLIP23.15■■□□□ 1.3
PDLIM3-203ENST00000284771 OR1D2P34982 312 aa23.15■■□□□ 1.3
PDLIM3-203ENST00000284771 UBE3AQ05086 875 aa23.15■■□□□ 1.3
PDLIM3-203ENST00000284771 SLC39A12Q504Y0 691 aa23.15■■□□□ 1.3
PDLIM3-203ENST00000284771 CYP26C1Q6V0L0 522 aa23.15■■□□□ 1.3
PDLIM3-203ENST00000284771 RAD9BQ6WBX8 426 aa23.15■■□□□ 1.3
PDLIM3-203ENST00000284771 GPR65Q8IYL9 337 aa23.15■■□□□ 1.3
PDLIM3-203ENST00000284771 SLC30A5Q8TAD4 765 aa23.15■■□□□ 1.3
PDLIM3-203ENST00000284771 RHOBTB2Q9BYZ6 727 aa23.15■■□□□ 1.3
PDLIM3-203ENST00000284771 TLR9Q9NR96 1032 aa23.15■■□□□ 1.3
PDLIM3-203ENST00000284771 TSPAN16Q9UKR8 245 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms