RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 MGAT5BQ3V5L5 792 aa13.72□□□□□ -0.21
SMARCA5-201ENST00000283131 ZNF746Q6NUN9 644 aaPredicted RBP13.72□□□□□ -0.21
SMARCA5-201ENST00000283131 TAF2Q6P1X5 1199 aa13.72□□□□□ -0.21
SMARCA5-201ENST00000283131 MTSS1LQ765P7 747 aa13.72□□□□□ -0.21
SMARCA5-201ENST00000283131 DNAJC9Q8WXX5 260 aa13.72□□□□□ -0.21
SMARCA5-201ENST00000283131 PPCSQ9HAB8 311 aa13.72□□□□□ -0.21
SMARCA5-201ENST00000283131 GNG14A0A1W2PPG7 69 aa13.72□□□□□ -0.21
SMARCA5-201ENST00000283131 EEF2KO00418 725 aaKnown RBP13.72□□□□□ -0.21
SMARCA5-201ENST00000283131 CDH18Q13634 790 aa13.72□□□□□ -0.21
SMARCA5-201ENST00000283131 CINPQ9BW66 212 aaPredicted RBP13.72□□□□□ -0.21
SMARCA5-201ENST00000283131 AGO2Q9UKV8 859 aaKnown RBP13.72□□□□□ -0.21
SMARCA5-201ENST00000283131 LIN54Q6MZP7 749 aa13.72□□□□□ -0.21
SMARCA5-201ENST00000283131 HIC2Q96JB3 615 aa13.72□□□□□ -0.21
SMARCA5-201ENST00000283131 GRID1Q9ULK0 1009 aa13.72□□□□□ -0.21
SMARCA5-201ENST00000283131 MAP3K19Q56UN5 1328 aa13.72□□□□□ -0.21
SMARCA5-201ENST00000283131 POLR3AO14802 1390 aaPredicted RBP13.72□□□□□ -0.21
SMARCA5-201ENST00000283131 MPOP05164 745 aa13.72□□□□□ -0.21
SMARCA5-201ENST00000283131 SNRNP48Q6IEG0 339 aaKnown RBP13.72□□□□□ -0.21
SMARCA5-201ENST00000283131 BRINP3Q76B58 766 aa13.72□□□□□ -0.21
SMARCA5-201ENST00000283131 FOXP4Q8IVH2 680 aaPredicted RBP13.72□□□□□ -0.21
SMARCA5-201ENST00000283131 IPMKQ8NFU5 416 aa13.72□□□□□ -0.21
SMARCA5-201ENST00000283131 SEPT1Q8WYJ6 367 aa13.72□□□□□ -0.21
SMARCA5-201ENST00000283131 FKBP14Q9NWM8 211 aa13.72□□□□□ -0.21
SMARCA5-201ENST00000283131 CHP2O43745 196 aa13.72□□□□□ -0.21
SMARCA5-201ENST00000283131 ARL3P36405 182 aa13.72□□□□□ -0.21
SMARCA5-201ENST00000283131 AGAP9Q5VTM2 703 aa13.72□□□□□ -0.21
SMARCA5-201ENST00000283131 SLITRK1Q96PX8 696 aa13.72□□□□□ -0.21
SMARCA5-201ENST00000283131 CNPY3Q9BT09 278 aa13.72□□□□□ -0.21
SMARCA5-201ENST00000283131 ROGDIQ9GZN7 287 aa13.72□□□□□ -0.21
SMARCA5-201ENST00000283131 RACGAP1Q9H0H5 632 aa13.72□□□□□ -0.21
SMARCA5-201ENST00000283131 ABHD10Q9NUJ1 306 aa13.72□□□□□ -0.21
SMARCA5-201ENST00000283131 PPP2R3BQ9Y5P8 575 aa13.72□□□□□ -0.21
SMARCA5-201ENST00000283131 MAP3K1Q13233 1512 aa13.72□□□□□ -0.21
SMARCA5-201ENST00000283131 KRT33AO76009 404 aa13.72□□□□□ -0.21
SMARCA5-201ENST00000283131 QARSP47897 775 aaKnown RBP13.72□□□□□ -0.21
SMARCA5-201ENST00000283131 SWSAP1Q6NVH7 229 aa13.72□□□□□ -0.21
SMARCA5-201ENST00000283131 HERC5Q9UII4 1024 aaKnown RBP13.72□□□□□ -0.21
SMARCA5-201ENST00000283131 IFT140Q96RY7 1462 aa13.71□□□□□ -0.21
SMARCA5-201ENST00000283131 CDK13Q14004 1512 aaKnown RBP13.71□□□□□ -0.21
SMARCA5-201ENST00000283131 FAM47DPA6NHR8 397 aa13.71□□□□□ -0.21
SMARCA5-201ENST00000283131 PCNAP12004 261 aa13.71□□□□□ -0.21
SMARCA5-201ENST00000283131 ADRM1Q16186 407 aa13.71□□□□□ -0.21
SMARCA5-201ENST00000283131 KNOP1Q1ED39 458 aaKnown RBP13.71□□□□□ -0.21
SMARCA5-201ENST00000283131 GALNTL6Q49A17 601 aa13.71□□□□□ -0.21
SMARCA5-201ENST00000283131 RPTNQ6XPR3 784 aa13.71□□□□□ -0.21
SMARCA5-201ENST00000283131 TRPC4APQ8TEL6 797 aa13.71□□□□□ -0.21
SMARCA5-201ENST00000283131 ZNF333Q96JL9 665 aa13.71□□□□□ -0.21
SMARCA5-201ENST00000283131 KATNAL1Q9BW62 490 aa13.71□□□□□ -0.21
SMARCA5-201ENST00000283131 ZHX2Q9Y6X8 837 aa13.71□□□□□ -0.21
SMARCA5-201ENST00000283131 KRT34O76011 436 aa13.71□□□□□ -0.21
SMARCA5-201ENST00000283131 MED26O95402 600 aa13.71□□□□□ -0.21
SMARCA5-201ENST00000283131 FGRP09769 529 aa13.71□□□□□ -0.21
SMARCA5-201ENST00000283131 LBPP18428 481 aa13.71□□□□□ -0.21
SMARCA5-201ENST00000283131 S100A1P23297 94 aa13.71□□□□□ -0.21
SMARCA5-201ENST00000283131 STILQ15468 1287 aa13.71□□□□□ -0.21
SMARCA5-201ENST00000283131 B3GALNT2Q8NCR0 500 aa13.71□□□□□ -0.21
SMARCA5-201ENST00000283131 SLC4A9Q96Q91 983 aa13.71□□□□□ -0.21
SMARCA5-201ENST00000283131 POLR1BQ9H9Y6 1135 aa13.71□□□□□ -0.21
SMARCA5-201ENST00000283131 GOLGA4Q13439 2230 aaKnown RBP13.71□□□□□ -0.21
SMARCA5-201ENST00000283131 SNX8Q9Y5X2 465 aa13.71□□□□□ -0.21
SMARCA5-201ENST00000283131 PNMA8CA0A1B0GUJ8 204 aa13.71□□□□□ -0.21
SMARCA5-201ENST00000283131 PRPF3O43395 683 aaKnown RBP13.71□□□□□ -0.21
SMARCA5-201ENST00000283131 PSTPIP1O43586 416 aa13.71□□□□□ -0.21
SMARCA5-201ENST00000283131 ACSL4O60488 711 aa13.71□□□□□ -0.21
SMARCA5-201ENST00000283131 PCCAP05165 728 aaPredicted RBP13.71□□□□□ -0.21
SMARCA5-201ENST00000283131 UBTFL6P0CB48 400 aaPredicted RBP13.71□□□□□ -0.21
SMARCA5-201ENST00000283131 GYS2P54840 703 aa13.71□□□□□ -0.21
SMARCA5-201ENST00000283131 OR6J1Q8NGC5 347 aa13.71□□□□□ -0.21
SMARCA5-201ENST00000283131 SH3GLB2Q9NR46 395 aa13.71□□□□□ -0.21
SMARCA5-201ENST00000283131 GABBR1Q9UBS5 961 aa13.71□□□□□ -0.21
SMARCA5-201ENST00000283131 MGRN1O60291 552 aa13.71□□□□□ -0.22
SMARCA5-201ENST00000283131 RBMXL2O75526 392 aaKnown RBP13.71□□□□□ -0.22
SMARCA5-201ENST00000283131 BIKQ13323 160 aa13.71□□□□□ -0.22
SMARCA5-201ENST00000283131 GNA13Q14344 377 aa13.71□□□□□ -0.22
SMARCA5-201ENST00000283131 KPNB1Q14974 876 aaKnown RBP13.71□□□□□ -0.22
SMARCA5-201ENST00000283131 LINC00523Q86TU6 105 aa13.71□□□□□ -0.22
SMARCA5-201ENST00000283131 GATAD2AQ86YP4 633 aa13.71□□□□□ -0.22
SMARCA5-201ENST00000283131 ZNF671Q8TAW3 534 aa13.71□□□□□ -0.22
SMARCA5-201ENST00000283131 AAASQ9NRG9 546 aa13.71□□□□□ -0.22
SMARCA5-201ENST00000283131 USP15Q9Y4E8 981 aaPredicted RBP13.71□□□□□ -0.22
SMARCA5-201ENST00000283131 SMCO3A2RU48 225 aa13.71□□□□□ -0.22
SMARCA5-201ENST00000283131 HLA-DQA2P01906 255 aa13.71□□□□□ -0.22
SMARCA5-201ENST00000283131 DSG1Q02413 1049 aa13.71□□□□□ -0.22
SMARCA5-201ENST00000283131 KCNV1Q6PIU1 500 aa13.71□□□□□ -0.22
SMARCA5-201ENST00000283131 DDX47Q9H0S4 455 aaKnown RBP13.71□□□□□ -0.22
SMARCA5-201ENST00000283131 ZNF112Q9UJU3 913 aa13.71□□□□□ -0.22
SMARCA5-201ENST00000283131 MTSS1O43312 755 aa13.7□□□□□ -0.22
SMARCA5-201ENST00000283131 OR6B1O95007 311 aa13.7□□□□□ -0.22
SMARCA5-201ENST00000283131 ZNF682O95780 498 aa13.7□□□□□ -0.22
SMARCA5-201ENST00000283131 NUDT2P50583 147 aa13.7□□□□□ -0.22
SMARCA5-201ENST00000283131 PIGHQ14442 188 aaPredicted RBP13.7□□□□□ -0.22
SMARCA5-201ENST00000283131 PDK1Q15118 436 aa13.7□□□□□ -0.22
SMARCA5-201ENST00000283131 VPS33BQ9H267 617 aa13.7□□□□□ -0.22
SMARCA5-201ENST00000283131 WDR35Q9P2L0 1181 aa13.7□□□□□ -0.22
SMARCA5-201ENST00000283131 PCDHB7Q9Y5E2 793 aa13.7□□□□□ -0.22
SMARCA5-201ENST00000283131 ABCB11O95342 1321 aa13.7□□□□□ -0.22
SMARCA5-201ENST00000283131 TPST1O60507 370 aa13.7□□□□□ -0.22
SMARCA5-201ENST00000283131 VPS26AO75436 327 aa13.7□□□□□ -0.22
SMARCA5-201ENST00000283131 SKP1P63208 163 aa13.7□□□□□ -0.22
SMARCA5-201ENST00000283131 SEMA3FQ13275 785 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms