RNA–Protein interactions for RNA: ENST00000278460.11

C11orf49-201, Transcript of chromosome 11 open reading frame 49, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C11orf49, Length 1,645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-201ENST00000278460 SNX25Q9H3E2 840 aa20.63■□□□□ 0.89
C11orf49-201ENST00000278460 RBM12Q9NTZ6 932 aaKnown RBP20.63■□□□□ 0.89
C11orf49-201ENST00000278460 ARGLU1Q9NWB6 273 aaPredicted RBP20.63■□□□□ 0.89
C11orf49-201ENST00000278460 SCN5AQ14524 2016 aa20.63■□□□□ 0.89
C11orf49-201ENST00000278460 TARSL2A2RTX5 802 aaKnown RBP20.62■□□□□ 0.89
C11orf49-201ENST00000278460 TMEM191CA6NGB0 347 aa20.62■□□□□ 0.89
C11orf49-201ENST00000278460 INPPL1O15357 1258 aa20.62■□□□□ 0.89
C11orf49-201ENST00000278460 SETSIPP0DME0 302 aa20.62■□□□□ 0.89
C11orf49-201ENST00000278460 FGFR1P11362 822 aa20.62■□□□□ 0.89
C11orf49-201ENST00000278460 SELPP16109 830 aa20.62■□□□□ 0.89
C11orf49-201ENST00000278460 GNL1P36915 607 aaPredicted RBP20.62■□□□□ 0.89
C11orf49-201ENST00000278460 GABRB2P47870 512 aa20.62■□□□□ 0.89
C11orf49-201ENST00000278460 PPP1R26Q5T8A7 1209 aaPredicted RBP20.62■□□□□ 0.89
C11orf49-201ENST00000278460 CPNE8Q86YQ8 564 aa20.62■□□□□ 0.89
C11orf49-201ENST00000278460 ADGRF2Q8IZF7 708 aa20.62■□□□□ 0.89
C11orf49-201ENST00000278460 C12orf29Q8N999 325 aa20.62■□□□□ 0.89
C11orf49-201ENST00000278460 TET1Q8NFU7 2136 aa20.62■□□□□ 0.89
C11orf49-201ENST00000278460 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.62■□□□□ 0.89
C11orf49-201ENST00000278460 RNF208Q9H0X6 261 aa20.62■□□□□ 0.89
C11orf49-201ENST00000278460 IP6K2Q9UHH9 426 aa20.62■□□□□ 0.89
C11orf49-201ENST00000278460 RAB21Q9UL25 225 aa20.62■□□□□ 0.89
C11orf49-201ENST00000278460 C9IYK1 514 aa20.61■□□□□ 0.89
C11orf49-201ENST00000278460 PODXLO00592 558 aa20.61■□□□□ 0.89
C11orf49-201ENST00000278460 EOMESO95936 686 aa20.61■□□□□ 0.89
C11orf49-201ENST00000278460 RBM10P98175 930 aaKnown RBP20.61■□□□□ 0.89
C11orf49-201ENST00000278460 GRIK3Q13003 919 aa20.61■□□□□ 0.89
C11orf49-201ENST00000278460 PDCLQ13371 301 aa20.61■□□□□ 0.89
C11orf49-201ENST00000278460 ZNF268Q14587 947 aaPredicted RBP20.61■□□□□ 0.89
C11orf49-201ENST00000278460 GOLGA7BQ2TAP0 167 aa20.61■□□□□ 0.89
C11orf49-201ENST00000278460 PKDCCQ504Y2 493 aa20.61■□□□□ 0.89
C11orf49-201ENST00000278460 FAM43BQ6ZT52 329 aaPredicted RBP20.61■□□□□ 0.89
C11orf49-201ENST00000278460 RNF169Q8NCN4 708 aa20.61■□□□□ 0.89
C11orf49-201ENST00000278460 RNPC3Q96LT9 517 aaKnown RBP20.61■□□□□ 0.89
C11orf49-201ENST00000278460 CPXM1Q96SM3 734 aa20.61■□□□□ 0.89
C11orf49-201ENST00000278460 FTHL17Q9BXU8 183 aa20.61■□□□□ 0.89
C11orf49-201ENST00000278460 CYB561D2O14569 222 aa20.6■□□□□ 0.89
C11orf49-201ENST00000278460 MARCKSL1P49006 195 aa20.6■□□□□ 0.89
C11orf49-201ENST00000278460 RNASE9P60153 205 aaKnown RBP20.6■□□□□ 0.89
C11orf49-201ENST00000278460 CYP4A22Q5TCH4 519 aa20.6■□□□□ 0.89
C11orf49-201ENST00000278460 SLC24A5Q71RS6 500 aa20.6■□□□□ 0.89
C11orf49-201ENST00000278460 RTN4RL1Q86UN2 441 aaPredicted RBP20.6■□□□□ 0.89
C11orf49-201ENST00000278460 PDCL2Q8N4E4 241 aa20.6■□□□□ 0.89
C11orf49-201ENST00000278460 UBA3Q8TBC4 463 aa20.6■□□□□ 0.89
C11orf49-201ENST00000278460 DDX27Q96GQ7 796 aaKnown RBP20.6■□□□□ 0.89
C11orf49-201ENST00000278460 NAP1L3Q99457 506 aaPredicted RBP20.6■□□□□ 0.89
C11orf49-201ENST00000278460 MIS12Q9H081 205 aa20.6■□□□□ 0.89
C11orf49-201ENST00000278460 SIGLEC16A6NMB1 481 aa20.6■□□□□ 0.89
C11orf49-201ENST00000278460 ERBB2P04626 1255 aa20.6■□□□□ 0.89
C11orf49-201ENST00000278460 PFKMP08237 780 aa20.6■□□□□ 0.89
C11orf49-201ENST00000278460 PAX3P23760 479 aa20.6■□□□□ 0.89
C11orf49-201ENST00000278460 CLCNKBP51801 687 aa20.6■□□□□ 0.89
C11orf49-201ENST00000278460 RWDD2BP57060 319 aa20.6■□□□□ 0.89
C11orf49-201ENST00000278460 PSMC1P62191 440 aaKnown RBP20.6■□□□□ 0.89
C11orf49-201ENST00000278460 RPL7AP62424 266 aaKnown RBP20.6■□□□□ 0.89
C11orf49-201ENST00000278460 FAM189BP81408 668 aa20.6■□□□□ 0.89
C11orf49-201ENST00000278460 BRD3Q15059 726 aa20.6■□□□□ 0.89
C11orf49-201ENST00000278460 UPP1Q16831 310 aa20.6■□□□□ 0.89
C11orf49-201ENST00000278460 GLE1Q53GS7 698 aaKnown RBP20.6■□□□□ 0.89
C11orf49-201ENST00000278460 WDR93Q6P2C0 686 aa20.6■□□□□ 0.89
C11orf49-201ENST00000278460 OSTM1Q86WC4 334 aa20.6■□□□□ 0.89
C11orf49-201ENST00000278460 XYLT1Q86Y38 959 aa20.6■□□□□ 0.89
C11orf49-201ENST00000278460 IPO4Q8TEX9 1081 aaKnown RBP20.6■□□□□ 0.89
C11orf49-201ENST00000278460 TNIP3Q96KP6 325 aa20.6■□□□□ 0.89
C11orf49-201ENST00000278460 PNKPQ96T60 521 aa20.6■□□□□ 0.89
C11orf49-201ENST00000278460 DPEP3Q9H4B8 488 aa20.6■□□□□ 0.89
C11orf49-201ENST00000278460 SYNCQ9H7C4 482 aa20.6■□□□□ 0.89
C11orf49-201ENST00000278460 HESX1Q9UBX0 185 aa20.6■□□□□ 0.89
C11orf49-201ENST00000278460 CCDC188H7C350 402 aa20.59■□□□□ 0.89
C11orf49-201ENST00000278460 PITPNM1O00562 1244 aa20.59■□□□□ 0.89
C11orf49-201ENST00000278460 GJB6O95452 261 aa20.59■□□□□ 0.89
C11orf49-201ENST00000278460 HSPA6P17066 643 aa20.59■□□□□ 0.89
C11orf49-201ENST00000278460 LMO2P25791 158 aa20.59■□□□□ 0.89
C11orf49-201ENST00000278460 AARSP49588 968 aaKnown RBP eCLIP20.59■□□□□ 0.89
C11orf49-201ENST00000278460 DCUN1D2Q6PH85 259 aa20.59■□□□□ 0.89
C11orf49-201ENST00000278460 TTC30AQ86WT1 665 aa20.59■□□□□ 0.89
C11orf49-201ENST00000278460 TMEM86AQ8N2M4 240 aa20.59■□□□□ 0.89
C11orf49-201ENST00000278460 LINC01599Q8WXQ3 324 aa20.59■□□□□ 0.89
C11orf49-201ENST00000278460 RUBCNQ92622 972 aa20.59■□□□□ 0.89
C11orf49-201ENST00000278460 MCRS1Q96EZ8 462 aa20.59■□□□□ 0.89
C11orf49-201ENST00000278460 SENP8Q96LD8 212 aa20.59■□□□□ 0.89
C11orf49-201ENST00000278460 UROC1Q96N76 676 aa20.59■□□□□ 0.89
C11orf49-201ENST00000278460 MCEEQ96PE7 176 aa20.59■□□□□ 0.89
C11orf49-201ENST00000278460 FAM49BQ9NUQ9 324 aa20.59■□□□□ 0.89
C11orf49-201ENST00000278460 TJP2Q9UDY2 1190 aa20.59■□□□□ 0.89
C11orf49-201ENST00000278460 TTC3P53804 2025 aa20.59■□□□□ 0.89
C11orf49-201ENST00000278460 MICAL3Q7RTP6 2002 aa20.58■□□□□ 0.89
C11orf49-201ENST00000278460 CCDC151A5D8V7 595 aa20.58■□□□□ 0.89
C11orf49-201ENST00000278460 GABRDO14764 452 aa20.58■□□□□ 0.89
C11orf49-201ENST00000278460 CAPN15O75808 1086 aa20.58■□□□□ 0.89
C11orf49-201ENST00000278460 MYCP01106 439 aaPredicted RBP20.58■□□□□ 0.89
C11orf49-201ENST00000278460 POMCP01189 267 aa20.58■□□□□ 0.89
C11orf49-201ENST00000278460 FGGP02679 453 aa20.58■□□□□ 0.89
C11orf49-201ENST00000278460 PDGFRBP09619 1106 aa20.58■□□□□ 0.89
C11orf49-201ENST00000278460 MCM3P25205 808 aa20.58■□□□□ 0.89
C11orf49-201ENST00000278460 CLCN6P51797 869 aa20.58■□□□□ 0.89
C11orf49-201ENST00000278460 TUSC3Q13454 348 aa20.58■□□□□ 0.89
C11orf49-201ENST00000278460 SEL1L2Q5TEA6 688 aa20.58■□□□□ 0.89
C11orf49-201ENST00000278460 NIPA2Q8N8Q9 360 aa20.58■□□□□ 0.89
C11orf49-201ENST00000278460 STK32AQ8WU08 396 aa20.58■□□□□ 0.89
C11orf49-201ENST00000278460 RNF216Q9NWF9 866 aaPredicted RBP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms