RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 PNMA5Q96PV4 448 aa16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 MRPL1Q9BYD6 325 aaKnown RBP16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 NMUR2Q9GZQ4 415 aa16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 KCNK13Q9HB14 408 aa16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 ACP6Q9NPH0 428 aa16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 PI4KBQ9UBF8 816 aa16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 DIS3Q9Y2L1 958 aaKnown RBP16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 FADS3Q9Y5Q0 445 aa16.51■□□□□ 0.23
CTDSP1-201ENST00000273062 A0A1W2PPM1 405 aa16.5■□□□□ 0.23
CTDSP1-201ENST00000273062 FOXD2O60548 495 aaPredicted RBP16.5■□□□□ 0.23
CTDSP1-201ENST00000273062 TCEA3O75764 348 aa16.5■□□□□ 0.23
CTDSP1-201ENST00000273062 SORBS2O94875 1100 aaKnown RBP16.5■□□□□ 0.23
CTDSP1-201ENST00000273062 DLATP10515 647 aaKnown RBP16.5■□□□□ 0.23
CTDSP1-201ENST00000273062 VCPP55072 806 aaKnown RBP16.5■□□□□ 0.23
CTDSP1-201ENST00000273062 FYB2Q5VWT5 728 aa16.5■□□□□ 0.23
CTDSP1-201ENST00000273062 TMC7Q7Z402 723 aa16.5■□□□□ 0.23
CTDSP1-201ENST00000273062 GCNAQ96QF7 691 aa16.5■□□□□ 0.23
CTDSP1-201ENST00000273062 TCHPQ9BT92 498 aa16.5■□□□□ 0.23
CTDSP1-201ENST00000273062 IDI2Q9BXS1 227 aa16.5■□□□□ 0.23
CTDSP1-201ENST00000273062 KIAA1586Q9HCI6 787 aa16.5■□□□□ 0.23
CTDSP1-201ENST00000273062 ANKFY1Q9P2R3 1169 aa16.5■□□□□ 0.23
CTDSP1-201ENST00000273062 DMTF1Q9Y222 760 aa16.5■□□□□ 0.23
CTDSP1-201ENST00000273062 NCANO14594 1321 aa16.5■□□□□ 0.23
CTDSP1-201ENST00000273062 ENO1P06733 434 aaKnown RBP16.5■□□□□ 0.23
CTDSP1-201ENST00000273062 ADRA1DP25100 572 aa16.5■□□□□ 0.23
CTDSP1-201ENST00000273062 CLK2P49760 499 aaKnown RBP16.5■□□□□ 0.23
CTDSP1-201ENST00000273062 CACNB1Q02641 598 aaPredicted RBP16.5■□□□□ 0.23
CTDSP1-201ENST00000273062 FOLH1Q04609 750 aa16.5■□□□□ 0.23
CTDSP1-201ENST00000273062 ECM1Q16610 540 aa16.5■□□□□ 0.23
CTDSP1-201ENST00000273062 NET1Q7Z628 596 aaPredicted RBP16.5■□□□□ 0.23
CTDSP1-201ENST00000273062 PPM1KQ8N3J5 372 aa16.5■□□□□ 0.23
CTDSP1-201ENST00000273062 TMEM120AQ9BXJ8 343 aa16.5■□□□□ 0.23
CTDSP1-201ENST00000273062 APPL1Q9UKG1 709 aa16.5■□□□□ 0.23
CTDSP1-201ENST00000273062 PLA2G4CQ9UP65 541 aa16.5■□□□□ 0.23
CTDSP1-201ENST00000273062 RBMX2Q9Y388 322 aaKnown RBP16.5■□□□□ 0.23
CTDSP1-201ENST00000273062 ACTL7BQ9Y614 415 aa16.5■□□□□ 0.23
CTDSP1-201ENST00000273062 MYPNQ86TC9 1320 aa16.5■□□□□ 0.23
CTDSP1-201ENST00000273062 SYNGAP1Q96PV0 1343 aa16.5■□□□□ 0.23
CTDSP1-201ENST00000273062 hCG_1984214I3L0E3 225 aa16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 NOP14P78316 857 aaKnown RBP16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 HP1BP3Q5SSJ5 553 aaPredicted RBP16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 GPATCH4Q5T3I0 446 aaKnown RBP16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 SLFN13Q68D06 897 aa16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 CCDC62Q6P9F0 684 aa16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 ZNF713Q8N859 430 aaPredicted RBP16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 GDPD5Q8WTR4 605 aa16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 ATG4AQ8WYN0 398 aa16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 LARP4BQ92615 738 aaKnown RBP16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 TRPC7Q9HCX4 862 aa16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 PVALEFA0A1B0GWK0 134 aa16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 FUOMA2VDF0 154 aa16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 STRNO43815 780 aa16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 IVDP26440 423 aa16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 PLCB3Q01970 1234 aa16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 EFTUD2Q15029 972 aaKnown RBP eCLIP16.49■□□□□ 0.235e-10■■■■■ 29
CTDSP1-201ENST00000273062 CAPN12Q6ZSI9 719 aa16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 SLC30A5Q8TAD4 765 aa16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 PLEKHO2Q8TD55 490 aa16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 HAS1Q92839 578 aa16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 CASP10Q92851 521 aa16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 P2RX7Q99572 595 aaKnown RBP16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 NEURL2Q9BR09 285 aa16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 OSBPL8Q9BZF1 889 aa16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 TPK1Q9H3S4 243 aa16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 CLRN2A0PK11 232 aa16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 POC1B-GALNT4F8VUJ3 575 aa16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 FCHO1O14526 889 aa16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 PIAS1O75925 651 aa16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 CDH2P19022 906 aaPredicted RBP16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 TMED10P49755 219 aaKnown RBP16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 KDSRQ06136 332 aa16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 COASYQ13057 564 aa16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 CAMK2BQ13554 666 aa16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 TRMT5Q32P41 509 aaKnown RBP16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 ARSHQ5FYA8 562 aa16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 ZNF410Q86VK4 478 aa16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 SFR1Q86XK3 245 aa16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 RAVER1Q8IY67 606 aaKnown RBP16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 POU5F2Q8N7G0 328 aa16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 RNF169Q8NCN4 708 aa16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 MTBPQ96DY7 904 aa16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 CCDC17Q96LX7 622 aa16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 SIX2Q9NPC8 291 aa16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 SERPINA10Q9UK55 444 aa16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 HDAC9Q9UKV0 1011 aa16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 PCDHA1Q9Y5I3 950 aa16.49■□□□□ 0.23
CTDSP1-201ENST00000273062 CAPN8A6NHC0 703 aa16.48■□□□□ 0.23
CTDSP1-201ENST00000273062 NDC80O14777 642 aa16.48■□□□□ 0.23
CTDSP1-201ENST00000273062 PRPF4O43172 522 aaKnown RBP eCLIP16.48■□□□□ 0.236e-7■■■□□ 18.2
CTDSP1-201ENST00000273062 MAGEC1O60732 1142 aa16.48■□□□□ 0.23
CTDSP1-201ENST00000273062 FUCA1P04066 466 aa16.48■□□□□ 0.23
CTDSP1-201ENST00000273062 KRT15P19012 456 aa16.48■□□□□ 0.23
CTDSP1-201ENST00000273062 PMLP29590 882 aa16.48■□□□□ 0.23
CTDSP1-201ENST00000273062 KPNA1P52294 538 aaPredicted RBP16.48■□□□□ 0.23
CTDSP1-201ENST00000273062 JAM2P57087 298 aa16.48■□□□□ 0.23
CTDSP1-201ENST00000273062 LMBRD2Q68DH5 695 aaPredicted RBP16.48■□□□□ 0.23
CTDSP1-201ENST00000273062 TATDN1Q6P1N9 297 aa16.48■□□□□ 0.23
CTDSP1-201ENST00000273062 RBM15Q96T37 977 aaKnown RBP eCLIP16.48■□□□□ 0.232e-6■■■■□ 21.5
CTDSP1-201ENST00000273062 S100A14Q9HCY8 104 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms