RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 CCL26Q9Y258 94 aa16.43■□□□□ 0.22
SOD1-201ENST00000270142 PCDHB13Q9Y5F0 798 aa16.43■□□□□ 0.22
SOD1-201ENST00000270142 MORC2Q9Y6X9 1032 aaPredicted RBP16.43■□□□□ 0.22
SOD1-201ENST00000270142 CHURC1-FNTBB4DL54 471 aa16.42■□□□□ 0.22
SOD1-201ENST00000270142 EXTL3O43909 919 aa16.42■□□□□ 0.22
SOD1-201ENST00000270142 PRPF40AO75400 957 aaKnown RBP16.42■□□□□ 0.22
SOD1-201ENST00000270142 PRPF6O94906 941 aaKnown RBP16.42■□□□□ 0.22
SOD1-201ENST00000270142 PAPSS2O95340 614 aaPredicted RBP16.42■□□□□ 0.22
SOD1-201ENST00000270142 ACAT1P24752 427 aaKnown RBP16.42■□□□□ 0.22
SOD1-201ENST00000270142 FNTBP49356 437 aa16.42■□□□□ 0.22
SOD1-201ENST00000270142 NLRP12P59046 1061 aa16.42■□□□□ 0.22
SOD1-201ENST00000270142 BFSP1Q12934 665 aa16.42■□□□□ 0.22
SOD1-201ENST00000270142 ALCAMQ13740 583 aa16.42■□□□□ 0.22
SOD1-201ENST00000270142 CCINQ13939 588 aa16.42■□□□□ 0.22
SOD1-201ENST00000270142 SLC39A14Q15043 492 aa16.42■□□□□ 0.22
SOD1-201ENST00000270142 CCDC142Q17RM4 750 aa16.42■□□□□ 0.22
SOD1-201ENST00000270142 INTS6LQ5JSJ4 861 aaKnown RBP16.42■□□□□ 0.22
SOD1-201ENST00000270142 DGKKQ5KSL6 1271 aa16.42■□□□□ 0.22
SOD1-201ENST00000270142 PRR23BQ6ZRT6 265 aa16.42■□□□□ 0.22
SOD1-201ENST00000270142 CSGALNACT2Q8N6G5 542 aa16.42■□□□□ 0.22
SOD1-201ENST00000270142 MAB21L3Q8N8X9 362 aa16.42■□□□□ 0.22
SOD1-201ENST00000270142 RIN3Q8TB24 985 aa16.42■□□□□ 0.22
SOD1-201ENST00000270142 NOC3LQ8WTT2 800 aaKnown RBP16.42■□□□□ 0.22
SOD1-201ENST00000270142 LEO1Q8WVC0 666 aaPredicted RBP16.42■□□□□ 0.22
SOD1-201ENST00000270142 RAB23Q9ULC3 237 aa16.42■□□□□ 0.22
SOD1-201ENST00000270142 MAGED2Q9UNF1 606 aaPredicted RBP16.42■□□□□ 0.22
SOD1-201ENST00000270142 HRO43593 1189 aa16.41■□□□□ 0.22
SOD1-201ENST00000270142 HCRTO43612 131 aa16.41■□□□□ 0.22
SOD1-201ENST00000270142 HUS1O60921 280 aa16.41■□□□□ 0.22
SOD1-201ENST00000270142 TADA3O75528 432 aa16.41■□□□□ 0.22
SOD1-201ENST00000270142 KRT19P08727 400 aa16.41■□□□□ 0.22
SOD1-201ENST00000270142 CSH1P0DML2 217 aa16.41■□□□□ 0.22
SOD1-201ENST00000270142 CSH2P0DML3 217 aa16.41■□□□□ 0.22
SOD1-201ENST00000270142 DDX6P26196 483 aaKnown RBP eCLIP16.41■□□□□ 0.229e-10■□□□□ 8.5
SOD1-201ENST00000270142 HOXC13P31276 330 aa16.41■□□□□ 0.22
SOD1-201ENST00000270142 SRSF5Q13243 272 aaKnown RBP16.41■□□□□ 0.22
SOD1-201ENST00000270142 NFE2Q16621 373 aaPredicted RBP16.41■□□□□ 0.22
SOD1-201ENST00000270142 ITPRIPL2Q3MIP1 535 aa16.41■□□□□ 0.22
SOD1-201ENST00000270142 LMBRD2Q68DH5 695 aaPredicted RBP16.41■□□□□ 0.22
SOD1-201ENST00000270142 TXNDC8Q6A555 127 aa16.41■□□□□ 0.22
SOD1-201ENST00000270142 TRIM68Q6AZZ1 485 aa16.41■□□□□ 0.22
SOD1-201ENST00000270142 LRRC52Q8N7C0 313 aa16.41■□□□□ 0.22
SOD1-201ENST00000270142 CACTINQ8WUQ7 758 aaKnown RBP16.41■□□□□ 0.22
SOD1-201ENST00000270142 USP13Q92995 863 aaPredicted RBP16.41■□□□□ 0.22
SOD1-201ENST00000270142 PKMYT1Q99640 499 aa16.41■□□□□ 0.22
SOD1-201ENST00000270142 FAM83CQ9BQN1 747 aa16.41■□□□□ 0.22
SOD1-201ENST00000270142 ACBD6Q9BR61 282 aa16.41■□□□□ 0.22
SOD1-201ENST00000270142 MTMR12Q9C0I1 747 aa16.41■□□□□ 0.22
SOD1-201ENST00000270142 TMEM206Q9H813 350 aa16.41■□□□□ 0.22
SOD1-201ENST00000270142 PDE11AQ9HCR9 933 aa16.41■□□□□ 0.22
SOD1-201ENST00000270142 HPS4Q9NQG7 708 aa16.41■□□□□ 0.22
SOD1-201ENST00000270142 FOXD4L1Q9NU39 408 aa16.41■□□□□ 0.22
SOD1-201ENST00000270142 THG1LQ9NWX6 298 aaKnown RBP16.41■□□□□ 0.22
SOD1-201ENST00000270142 SIX4Q9UIU6 781 aa16.41■□□□□ 0.22
SOD1-201ENST00000270142 ZMYM5Q9UJ78 669 aa16.41■□□□□ 0.22
SOD1-201ENST00000270142 ITGA11Q9UKX5 1188 aa16.41■□□□□ 0.22
SOD1-201ENST00000270142 SNX9Q9Y5X1 595 aa16.41■□□□□ 0.22
SOD1-201ENST00000270142 KIF26AQ9ULI4 1882 aaPredicted RBP16.41■□□□□ 0.22
SOD1-201ENST00000270142 TMEM191BP0C7N4 346 aa16.4■□□□□ 0.22
SOD1-201ENST00000270142 CYP2F1P24903 491 aa16.4■□□□□ 0.22
SOD1-201ENST00000270142 AVPR1AP37288 418 aa16.4■□□□□ 0.22
SOD1-201ENST00000270142 ATXN1P54253 815 aaKnown RBP16.4■□□□□ 0.22
SOD1-201ENST00000270142 MYL7Q01449 175 aa16.4■□□□□ 0.22
SOD1-201ENST00000270142 LMNB2Q03252 620 aa16.4■□□□□ 0.22
SOD1-201ENST00000270142 SPEM2Q0P670 501 aa16.4■□□□□ 0.22
SOD1-201ENST00000270142 SIM2Q14190 667 aaPredicted RBP16.4■□□□□ 0.22
SOD1-201ENST00000270142 DDR2Q16832 855 aa16.4■□□□□ 0.22
SOD1-201ENST00000270142 HEATR6Q6AI08 1181 aaKnown RBP16.4■□□□□ 0.22
SOD1-201ENST00000270142 LAIR1Q6GTX8 287 aa16.4■□□□□ 0.22
SOD1-201ENST00000270142 LONP2Q86WA8 852 aa16.4■□□□□ 0.22
SOD1-201ENST00000270142 TMEM86AQ8N2M4 240 aa16.4■□□□□ 0.22
SOD1-201ENST00000270142 GPD1LQ8N335 351 aa16.4■□□□□ 0.22
SOD1-201ENST00000270142 PDILTQ8N807 584 aa16.4■□□□□ 0.22
SOD1-201ENST00000270142 GLIS3Q8NEA6 775 aa16.4■□□□□ 0.22
SOD1-201ENST00000270142 CHFRQ96EP1 664 aa16.4■□□□□ 0.22
SOD1-201ENST00000270142 INTS4Q96HW7 963 aaKnown RBP16.4■□□□□ 0.22
SOD1-201ENST00000270142 GKN1Q9NS71 199 aa16.4■□□□□ 0.22
SOD1-201ENST00000270142 GDAP2Q9NXN4 497 aa16.4■□□□□ 0.22
SOD1-201ENST00000270142 GTF3C4Q9UKN8 822 aa16.4■□□□□ 0.22
SOD1-201ENST00000270142 OTOL1A6NHN0 477 aaPredicted RBP16.39■□□□□ 0.21
SOD1-201ENST00000270142 PRR5-ARHGAP8B1AHC4 643 aa16.39■□□□□ 0.21
SOD1-201ENST00000270142 NOL4O94818 638 aa16.39■□□□□ 0.21
SOD1-201ENST00000270142 NASPP49321 788 aaPredicted RBP16.39■□□□□ 0.21
SOD1-201ENST00000270142 RBP5P82980 135 aa16.39■□□□□ 0.21
SOD1-201ENST00000270142 ARHGAP8P85298 464 aa16.39■□□□□ 0.21
SOD1-201ENST00000270142 RUNX3Q13761 415 aa16.39■□□□□ 0.21
SOD1-201ENST00000270142 PKN3Q6P5Z2 889 aa16.39■□□□□ 0.21
SOD1-201ENST00000270142 CCDC65Q8IXS2 484 aa16.39■□□□□ 0.21
SOD1-201ENST00000270142 ADGRF2Q8IZF7 708 aa16.39■□□□□ 0.21
SOD1-201ENST00000270142 SYNPOQ8N3V7 929 aa16.39■□□□□ 0.21
SOD1-201ENST00000270142 TOP6BLQ8N6T0 577 aa16.39■□□□□ 0.21
SOD1-201ENST00000270142 MRPS31Q92665 395 aaKnown RBP16.39■□□□□ 0.21
SOD1-201ENST00000270142 HPS3Q969F9 1004 aa16.39■□□□□ 0.21
SOD1-201ENST00000270142 EBF3Q9H4W6 596 aa16.39■□□□□ 0.21
SOD1-201ENST00000270142 KIF9Q9HAQ2 790 aa16.39■□□□□ 0.21
SOD1-201ENST00000270142 ABCB6Q9NP58 842 aa16.39■□□□□ 0.21
SOD1-201ENST00000270142 TDP1Q9NUW8 608 aa16.39■□□□□ 0.21
SOD1-201ENST00000270142 CDV3Q9UKY7 258 aaKnown RBP16.39■□□□□ 0.21
SOD1-201ENST00000270142 PTPRJQ12913 1337 aa16.39■□□□□ 0.21
SOD1-201ENST00000270142 CACNA1AO00555 2505 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms