RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 MFAP3P55082 362 aa26.28■■□□□ 1.8
SSBP4-201ENST00000270061 XKR4Q5GH76 650 aa26.28■■□□□ 1.8
SSBP4-201ENST00000270061 KIAA0319Q5VV43 1072 aa26.28■■□□□ 1.8
SSBP4-201ENST00000270061 SNX27Q96L92 541 aa26.28■■□□□ 1.8
SSBP4-201ENST00000270061 APOL5Q9BWW9 433 aa26.28■■□□□ 1.8
SSBP4-201ENST00000270061 S1PR5Q9H228 398 aa26.28■■□□□ 1.8
SSBP4-201ENST00000270061 L2HGDHQ9H9P8 463 aa26.28■■□□□ 1.8
SSBP4-201ENST00000270061 ADAMTS1Q9UHI8 967 aa26.28■■□□□ 1.8
SSBP4-201ENST00000270061 GUCA1BQ9UMX6 200 aa26.28■■□□□ 1.8
SSBP4-201ENST00000270061 PLXNA3P51805 1871 aa26.27■■□□□ 1.8
SSBP4-201ENST00000270061 A0A087X0T9 212 aa26.27■■□□□ 1.8
SSBP4-201ENST00000270061 FAM228BP0C875 321 aa26.27■■□□□ 1.8
SSBP4-201ENST00000270061 EPCAMP16422 314 aa26.27■■□□□ 1.8
SSBP4-201ENST00000270061 ARHGAP44Q17R89 818 aa26.27■■□□□ 1.8
SSBP4-201ENST00000270061 ZNF569Q5MCW4 686 aa26.27■■□□□ 1.8
SSBP4-201ENST00000270061 VPS36Q86VN1 386 aa26.27■■□□□ 1.8
SSBP4-201ENST00000270061 WDR49Q8IV35 697 aa26.27■■□□□ 1.8
SSBP4-201ENST00000270061 SLC22A17Q8WUG5 538 aa26.27■■□□□ 1.8
SSBP4-201ENST00000270061 ATP8B3O60423 1300 aa26.27■■□□□ 1.8
SSBP4-201ENST00000270061 TNFSF9P41273 254 aa26.26■■□□□ 1.79
SSBP4-201ENST00000270061 SEZ6Q53EL9 994 aa26.26■■□□□ 1.79
SSBP4-201ENST00000270061 TDRD10Q5VZ19 366 aaKnown RBP26.26■■□□□ 1.79
SSBP4-201ENST00000270061 ENOSF1Q7L5Y1 443 aa26.26■■□□□ 1.79
SSBP4-201ENST00000270061 B3GALT6Q96L58 329 aa26.26■■□□□ 1.79
SSBP4-201ENST00000270061 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP26.26■■□□□ 1.79
SSBP4-201ENST00000270061 SLC38A7Q9NVC3 462 aa26.26■■□□□ 1.79
SSBP4-201ENST00000270061 DZANK1Q9NVP4 752 aa26.26■■□□□ 1.79
SSBP4-201ENST00000270061 TRIM10Q9UDY6 481 aa26.26■■□□□ 1.79
SSBP4-201ENST00000270061 NENFQ9UMX5 172 aa26.26■■□□□ 1.79
SSBP4-201ENST00000270061 TRIOO75962 3097 aa26.26■■□□□ 1.79
SSBP4-201ENST00000270061 PTPRJQ12913 1337 aa26.26■■□□□ 1.79
SSBP4-201ENST00000270061 ADH1AP07327 375 aa26.25■■□□□ 1.79
SSBP4-201ENST00000270061 CLCN4P51793 760 aa26.25■■□□□ 1.79
SSBP4-201ENST00000270061 GCNT1Q02742 428 aa26.25■■□□□ 1.79
SSBP4-201ENST00000270061 ENOX2Q16206 610 aaKnown RBP26.25■■□□□ 1.79
SSBP4-201ENST00000270061 KYAT1Q16773 422 aa26.25■■□□□ 1.79
SSBP4-201ENST00000270061 SUSD6Q92537 303 aa26.25■■□□□ 1.79
SSBP4-201ENST00000270061 KREMEN1Q96MU8 473 aa26.25■■□□□ 1.79
SSBP4-201ENST00000270061 UROC1Q96N76 676 aa26.25■■□□□ 1.79
SSBP4-201ENST00000270061 SYT11Q9BT88 431 aa26.25■■□□□ 1.79
SSBP4-201ENST00000270061 CNTN3Q9P232 1028 aa26.25■■□□□ 1.79
SSBP4-201ENST00000270061 PNMA6AP0CW24 399 aaPredicted RBP26.25■■□□□ 1.79
SSBP4-201ENST00000270061 KCNE1P15382 129 aa26.25■■□□□ 1.79
SSBP4-201ENST00000270061 CES5AQ6NT32 575 aa26.25■■□□□ 1.79
SSBP4-201ENST00000270061 GPR65Q8IYL9 337 aa26.25■■□□□ 1.79
SSBP4-201ENST00000270061 FAM71AQ8IYT1 594 aa26.25■■□□□ 1.79
SSBP4-201ENST00000270061 PPM1KQ8N3J5 372 aa26.25■■□□□ 1.79
SSBP4-201ENST00000270061 SHC3Q92529 594 aa26.25■■□□□ 1.79
SSBP4-201ENST00000270061 ZMAT2Q96NC0 199 aaKnown RBP26.25■■□□□ 1.79
SSBP4-201ENST00000270061 GOLGA2P5Q9HBQ8 144 aa26.25■■□□□ 1.79
SSBP4-201ENST00000270061 TFR2Q9UP52 801 aa26.25■■□□□ 1.79
SSBP4-201ENST00000270061 C19orf67A6NJJ6 358 aa26.24■■□□□ 1.79
SSBP4-201ENST00000270061 TEX28O15482 410 aa26.24■■□□□ 1.79
SSBP4-201ENST00000270061 B3GAT3O94766 335 aa26.24■■□□□ 1.79
SSBP4-201ENST00000270061 HLA-DRAP01903 254 aa26.24■■□□□ 1.79
SSBP4-201ENST00000270061 CLCNKBP51801 687 aa26.24■■□□□ 1.79
SSBP4-201ENST00000270061 ITIH3Q06033 890 aa26.24■■□□□ 1.79
SSBP4-201ENST00000270061 ELAVL2Q12926 359 aaKnown RBP26.24■■□□□ 1.79
SSBP4-201ENST00000270061 SLC35F6Q8N357 371 aa26.24■■□□□ 1.79
SSBP4-201ENST00000270061 RIN2Q8WYP3 895 aaPredicted RBP26.24■■□□□ 1.79
SSBP4-201ENST00000270061 RXFP1Q9HBX9 757 aa26.24■■□□□ 1.79
SSBP4-201ENST00000270061 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP26.24■■□□□ 1.79
SSBP4-201ENST00000270061 TMEM189-UBE2V1I3L0A0 370 aa26.23■■□□□ 1.79
SSBP4-201ENST00000270061 VNN1O95497 513 aa26.23■■□□□ 1.79
SSBP4-201ENST00000270061 CBX2Q14781 532 aaPredicted RBP26.23■■□□□ 1.79
SSBP4-201ENST00000270061 UPP1Q16831 310 aa26.23■■□□□ 1.79
SSBP4-201ENST00000270061 SLC10A6Q3KNW5 377 aa26.23■■□□□ 1.79
SSBP4-201ENST00000270061 WDR44Q5JSH3 913 aa26.23■■□□□ 1.79
SSBP4-201ENST00000270061 FAM171A1Q5VUB5 890 aa26.23■■□□□ 1.79
SSBP4-201ENST00000270061 LMBRD2Q68DH5 695 aaPredicted RBP26.23■■□□□ 1.79
SSBP4-201ENST00000270061 DCLRE1AQ6PJP8 1040 aa26.23■■□□□ 1.79
SSBP4-201ENST00000270061 SLC30A5Q8TAD4 765 aa26.23■■□□□ 1.79
SSBP4-201ENST00000270061 ADAM7Q9H2U9 754 aa26.23■■□□□ 1.79
SSBP4-201ENST00000270061 NAGPAQ9UK23 515 aa26.23■■□□□ 1.79
SSBP4-201ENST00000270061 TULP1O00294 542 aaPredicted RBP26.23■■□□□ 1.79
SSBP4-201ENST00000270061 CLTAP09496 248 aa26.23■■□□□ 1.79
SSBP4-201ENST00000270061 SOX4Q06945 474 aaPredicted RBP26.23■■□□□ 1.79
SSBP4-201ENST00000270061 BIRC3Q13489 604 aa26.23■■□□□ 1.79
SSBP4-201ENST00000270061 OLIG1Q8TAK6 271 aa26.23■■□□□ 1.79
SSBP4-201ENST00000270061 KAT5Q92993 513 aa26.23■■□□□ 1.79
SSBP4-201ENST00000270061 TTPALQ9BTX7 342 aa26.23■■□□□ 1.79
SSBP4-201ENST00000270061 PHF7Q9BWX1 381 aaPredicted RBP26.23■■□□□ 1.79
SSBP4-201ENST00000270061 SPDYE4A6NLX3 237 aa26.22■■□□□ 1.79
SSBP4-201ENST00000270061 MEFVO15553 781 aaPredicted RBP26.22■■□□□ 1.79
SSBP4-201ENST00000270061 IL18RAPO95256 599 aa26.22■■□□□ 1.79
SSBP4-201ENST00000270061 CXCL8P10145 99 aa26.22■■□□□ 1.79
SSBP4-201ENST00000270061 PIK3CAP42336 1068 aa26.22■■□□□ 1.79
SSBP4-201ENST00000270061 CREMQ03060 361 aa26.22■■□□□ 1.79
SSBP4-201ENST00000270061 RTP2Q5QGT7 225 aa26.22■■□□□ 1.79
SSBP4-201ENST00000270061 CEP57Q86XR8 500 aa26.22■■□□□ 1.79
SSBP4-201ENST00000270061 OR5B17Q8NGF7 314 aa26.22■■□□□ 1.79
SSBP4-201ENST00000270061 TATDN2Q93075 761 aa26.22■■□□□ 1.79
SSBP4-201ENST00000270061 DDX27Q96GQ7 796 aaKnown RBP26.22■■□□□ 1.79
SSBP4-201ENST00000270061 PLEKHA5Q9HAU0 1116 aa26.22■■□□□ 1.79
SSBP4-201ENST00000270061 DUSP10Q9Y6W6 482 aa26.22■■□□□ 1.79
SSBP4-201ENST00000270061 C2orf16Q68DN1 1984 aa26.21■■□□□ 1.79
SSBP4-201ENST00000270061 DDX3XO00571 662 aaKnown RBP eCLIP26.21■■□□□ 1.791e-29■■■■□ 21.4
SSBP4-201ENST00000270061 DUOXA2Q1HG44 320 aa26.21■■□□□ 1.79
SSBP4-201ENST00000270061 RARS2Q5T160 578 aaKnown RBP26.21■■□□□ 1.79
SSBP4-201ENST00000270061 ALKBH5Q6P6C2 394 aaKnown RBP26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms