RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 PDK1Q15118 436 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 SPATA2LQ8IUW3 424 aaPredicted RBP12.57□□□□□ -0.4
SRRM4-201ENST00000267260 SVOPQ8N4V2 548 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 ILKAPQ9H0C8 392 aaPredicted RBP12.57□□□□□ -0.4
SRRM4-201ENST00000267260 TRIM43BA6NCK2 446 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 F8VZ95 297 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 ATP1A3P13637 1013 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 ACADSBP45954 432 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 C21orf59P57076 290 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 OTUD4Q01804 1114 aaKnown RBP12.57□□□□□ -0.4
SRRM4-201ENST00000267260 ZNF211Q13398 564 aaPredicted RBP12.57□□□□□ -0.4
SRRM4-201ENST00000267260 KCNB1Q14721 858 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 R3HDM1Q15032 1099 aaKnown RBP12.57□□□□□ -0.4
SRRM4-201ENST00000267260 FRMD8P1Q9BZ68 369 aaPredicted RBP12.57□□□□□ -0.4
SRRM4-201ENST00000267260 SIK2Q9H0K1 926 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 FKBP14Q9NWM8 211 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 FHOD1Q9Y613 1164 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 A8MXQ7 604 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 SOAT2O75908 522 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 LCA5LO95447 670 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 LCP1P13796 627 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 SESN2P58004 480 aaPredicted RBP12.57□□□□□ -0.4
SRRM4-201ENST00000267260 RGS18Q9NS28 235 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 USP21Q9UK80 565 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 OASLQ15646 514 aaKnown RBP12.57□□□□□ -0.4
SRRM4-201ENST00000267260 ARMC6Q6NXE6 501 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 KIAA0408Q6ZU52 694 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 ANKMY2Q8IV38 441 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 ZCCHC7Q8N3Z6 543 aaKnown RBP12.57□□□□□ -0.4
SRRM4-201ENST00000267260 PCMTD2Q9NV79 361 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 AGO2Q9UKV8 859 aaKnown RBP12.57□□□□□ -0.4
SRRM4-201ENST00000267260 SLC30A1Q9Y6M5 507 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 ATP10BO94823 1461 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 ITIH6Q6UXX5 1313 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 UBN2Q6ZU65 1347 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 NCKAP5LQ9HCH0 1330 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 F8W810 466 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 EIF2AK2P19525 551 aaKnown RBP12.57□□□□□ -0.4
SRRM4-201ENST00000267260 FEN1P39748 380 aaKnown RBP12.57□□□□□ -0.4
SRRM4-201ENST00000267260 STX4Q12846 297 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 ZSWIM7Q19AV6 140 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 PPP2R3CQ969Q6 453 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 CAMKK2Q96RR4 588 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 IL1RL2Q9HB29 575 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 PLEKHG2Q9H7P9 1386 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 MYH13Q9UKX3 1938 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.57□□□□□ -0.4
SRRM4-201ENST00000267260 ZNF589Q86UQ0 364 aaPredicted RBP12.57□□□□□ -0.4
SRRM4-201ENST00000267260 PHACTR1Q9C0D0 580 aa12.57□□□□□ -0.4
SRRM4-201ENST00000267260 E9PBE3 544 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 F5H423 210 aaPredicted RBP12.56□□□□□ -0.4
SRRM4-201ENST00000267260 CHRNB3Q05901 458 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 SLC18A3Q16572 532 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 CYP51A1Q16850 503 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 DGUOKQ16854 277 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 EDRF1Q3B7T1 1238 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 ZNF57Q68EA5 555 aaPredicted RBP12.56□□□□□ -0.4
SRRM4-201ENST00000267260 KIF12Q96FN5 646 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 C1orf50Q9BV19 199 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 OSBPL6Q9BZF3 934 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 INTS13Q9NVM9 706 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 C1orf232A0A0U1RR37 186 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 SFI1A8K8P3 1242 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 BMP10O95393 424 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 USP11P51784 963 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 CYFIP1Q7L576 1253 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 PEG10Q86TG7 708 aaKnown RBP12.56□□□□□ -0.4
SRRM4-201ENST00000267260 INTS2Q9H0H0 1204 aaKnown RBP12.56□□□□□ -0.4
SRRM4-201ENST00000267260 V9GYQ6 96 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 PTPRTO14522 1441 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 EMSYQ7Z589 1322 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 MEI4A8MW99 385 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 FDX1P10109 184 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 PHKG2P15735 406 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 TARSP26639 723 aaKnown RBP12.56□□□□□ -0.4
SRRM4-201ENST00000267260 STAT5AP42229 794 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 STAT5BP51692 787 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 NFX1Q12986 1120 aaKnown RBP12.56□□□□□ -0.4
SRRM4-201ENST00000267260 AKIRIN2Q53H80 203 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 THNSL1Q8IYQ7 743 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 RNASE11Q8TAA1 199 aaKnown RBP12.56□□□□□ -0.4
SRRM4-201ENST00000267260 MNTQ99583 582 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 MUC3BQ9H195 1237 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 CD248Q9HCU0 757 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 KCND2Q9NZV8 630 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 MCM8Q9UJA3 840 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 CSPG5O95196 566 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 RPS7P62081 194 aaKnown RBP12.56□□□□□ -0.4
SRRM4-201ENST00000267260 ADGRG1Q9Y653 693 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 ASMTLO95671 621 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 PWP1Q13610 501 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 DGKKQ5KSL6 1271 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 SCUBE1Q8IWY4 988 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 SPATA18Q8TC71 538 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 PPP1R16BQ96T49 567 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 POLR3FQ9H1D9 316 aaPredicted RBP12.56□□□□□ -0.4
SRRM4-201ENST00000267260 HPS4Q9NQG7 708 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 FAM217BQ9NTX9 383 aaPredicted RBP12.56□□□□□ -0.4
SRRM4-201ENST00000267260 ARHGEF40Q8TER5 1519 aa12.56□□□□□ -0.4
SRRM4-201ENST00000267260 ADAMTS12P58397 1594 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms