RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 SGK1O00141 431 aa13□□□□□ -0.33
CHMP2B-201ENST00000263780 TLR3O15455 904 aaKnown RBP13□□□□□ -0.33
CHMP2B-201ENST00000263780 KRT1P04264 644 aa13□□□□□ -0.33
CHMP2B-201ENST00000263780 VIL1P09327 827 aaKnown RBP13□□□□□ -0.33
CHMP2B-201ENST00000263780 ZCCHC18P0CG32 403 aa13□□□□□ -0.33
CHMP2B-201ENST00000263780 GLRA2P23416 452 aa13□□□□□ -0.33
CHMP2B-201ENST00000263780 NCKAP1LP55160 1127 aa13□□□□□ -0.33
CHMP2B-201ENST00000263780 PLCB3Q01970 1234 aa13□□□□□ -0.33
CHMP2B-201ENST00000263780 C1QBPQ07021 282 aaKnown RBP13□□□□□ -0.33
CHMP2B-201ENST00000263780 ATG16L1Q676U5 607 aa13□□□□□ -0.33
CHMP2B-201ENST00000263780 KYAT3Q6YP21 454 aaKnown RBP13□□□□□ -0.33
CHMP2B-201ENST00000263780 NLRX1Q86UT6 975 aa13□□□□□ -0.33
CHMP2B-201ENST00000263780 ANKMY2Q8IV38 441 aa13□□□□□ -0.33
CHMP2B-201ENST00000263780 FEZF2Q8TBJ5 459 aa13□□□□□ -0.33
CHMP2B-201ENST00000263780 MZB1Q8WU39 189 aa13□□□□□ -0.33
CHMP2B-201ENST00000263780 LZICQ8WZA0 190 aa13□□□□□ -0.33
CHMP2B-201ENST00000263780 TEKT1Q969V4 418 aa13□□□□□ -0.33
CHMP2B-201ENST00000263780 WWP1Q9H0M0 922 aa13□□□□□ -0.33
CHMP2B-201ENST00000263780 ZDHHC7Q9NXF8 308 aa13□□□□□ -0.33
CHMP2B-201ENST00000263780 STRIP2Q9ULQ0 834 aa13□□□□□ -0.33
CHMP2B-201ENST00000263780 SSX2IPQ9Y2D8 614 aa13□□□□□ -0.33
CHMP2B-201ENST00000263780 SNCAIPQ9Y6H5 919 aa13□□□□□ -0.33
CHMP2B-201ENST00000263780 LOXHD1Q8IVV2 1947 aa12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 CLUHO75153 1309 aa12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 SMIM31A0A1B0GVY4 71 aa12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 PABPC4LP0CB38 370 aaKnown RBP12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 ATF7P17544 494 aaPredicted RBP12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 AMPD1P23109 780 aa12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 RTP1P59025 263 aa12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 IRX4P78413 519 aa12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 ASPHQ12797 758 aa12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 OASLQ15646 514 aaKnown RBP12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 RIPOR1Q6ZS17 1223 aa12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 SV2AQ7L0J3 742 aa12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 PHF13Q86YI8 300 aaPredicted RBP12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 CERKQ8TCT0 537 aa12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 DCAKDQ8WVC6 231 aa12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 ARHGEF1Q92888 912 aaKnown RBP12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 IQCGQ9H095 443 aaKnown RBP12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 C1orf21Q9H246 121 aa12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 POLLQ9UGP5 575 aa12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 PHF24Q9UPV7 400 aa12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 DENND3A2RUS2 1198 aa12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 IRF6O14896 467 aa12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 BAG2O95816 211 aa12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 NEK3P51956 506 aa12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 SLC18A2Q05940 514 aa12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 MAP3K21Q5TCX8 1036 aa12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 C1orf146Q5VVC0 180 aa12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 SPOCD1Q6ZMY3 1216 aa12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 SMIM5Q71RC9 77 aa12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 SIAH1Q8IUQ4 282 aa12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 PDIK1LQ8N165 341 aa12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 GLIS1Q8NBF1 620 aa12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 TTC13Q8NBP0 860 aa12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 MIPOL1Q8TD10 442 aa12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 MTBPQ96DY7 904 aa12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 TUBGCP5Q96RT8 1024 aa12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 PRR12Q9ULL5 1215 aa12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 SORCS3Q9UPU3 1222 aa12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 TBC1D30Q9Y2I9 924 aa12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 MRPL11Q9Y3B7 192 aaKnown RBP12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 FARP1Q9Y4F1 1045 aaPredicted RBP12.99□□□□□ -0.33
CHMP2B-201ENST00000263780 CAPN14A8MX76 684 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 E7ESA3 106 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 H3BRJ5 948 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 SLC16A4O15374 487 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 SPAG6O75602 509 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 LYPLA2O95372 231 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 IFNB1P01574 187 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 ARP10275 920 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 PIM1P11309 404 aaPredicted RBP12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 RARRES1P49788 294 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 MED21Q13503 144 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 ITGA9Q13797 1035 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 SLC30A10Q6XR72 485 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 SLC51AQ86UW1 340 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 ULK2Q8IYT8 1036 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 ZSWIM2Q8NEG5 633 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 APBB2Q92870 758 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 TTC17Q96AE7 1141 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 C7orf26Q96N11 449 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 C11orf70Q9BRQ4 267 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 NMUR2Q9GZQ4 415 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 TBX20Q9UMR3 447 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 A0A1B0GVG6 124 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 INHBAP08476 426 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 KRT10P13645 584 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 ETS1P14921 441 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 SSTR1P30872 391 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 ETV4P43268 484 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 PEX3P56589 373 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 CYP24A1Q07973 514 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 CDC16Q13042 620 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 ABCB5Q2M3G0 1257 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 CRY2Q49AN0 593 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 TFDP3Q5H9I0 405 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 CFAP157Q5JU67 520 aa12.98□□□□□ -0.33
CHMP2B-201ENST00000263780 TATDN1Q6P1N9 297 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms