RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 PABPC1LQ4VXU2 614 aaKnown RBP13.37□□□□□ -0.27
CLNS1A-201ENST00000263309 ARHGAP15Q53QZ3 475 aa13.37□□□□□ -0.27
CLNS1A-201ENST00000263309 CBWD3Q5JTY5 395 aa13.37□□□□□ -0.27
CLNS1A-201ENST00000263309 CBWD5Q5RIA9 395 aa13.37□□□□□ -0.27
CLNS1A-201ENST00000263309 PTCRAQ6ISU1 281 aaPredicted RBP13.37□□□□□ -0.27
CLNS1A-201ENST00000263309 LILRA6Q6PI73 481 aa13.37□□□□□ -0.27
CLNS1A-201ENST00000263309 C11orf57Q6ZUT1 292 aaPredicted RBP13.37□□□□□ -0.27
CLNS1A-201ENST00000263309 PLCD3Q8N3E9 789 aa13.37□□□□□ -0.27
CLNS1A-201ENST00000263309 B3GALNT2Q8NCR0 500 aa13.37□□□□□ -0.27
CLNS1A-201ENST00000263309 NEK11Q8NG66 645 aa13.37□□□□□ -0.27
CLNS1A-201ENST00000263309 TMEM176AQ96HP8 235 aa13.37□□□□□ -0.27
CLNS1A-201ENST00000263309 PI4K2AQ9BTU6 479 aa13.37□□□□□ -0.27
CLNS1A-201ENST00000263309 RHOBTB2Q9BYZ6 727 aa13.37□□□□□ -0.27
CLNS1A-201ENST00000263309 GPR88Q9GZN0 384 aa13.37□□□□□ -0.27
CLNS1A-201ENST00000263309 INTS2Q9H0H0 1204 aaKnown RBP13.37□□□□□ -0.27
CLNS1A-201ENST00000263309 XYLT2Q9H1B5 865 aa13.37□□□□□ -0.27
CLNS1A-201ENST00000263309 PDCL3Q9H2J4 239 aa13.37□□□□□ -0.27
CLNS1A-201ENST00000263309 FBXW11Q9UKB1 542 aa13.37□□□□□ -0.27
CLNS1A-201ENST00000263309 GTF3C4Q9UKN8 822 aa13.37□□□□□ -0.27
CLNS1A-201ENST00000263309 PCDHGC5Q9Y5F6 944 aa13.37□□□□□ -0.27
CLNS1A-201ENST00000263309 NLRC5Q86WI3 1866 aa13.37□□□□□ -0.27
CLNS1A-201ENST00000263309 WDR27A2RRH5 827 aa13.36□□□□□ -0.27
CLNS1A-201ENST00000263309 TNFRSF10AO00220 468 aa13.36□□□□□ -0.27
CLNS1A-201ENST00000263309 TBC1D4O60343 1298 aa13.36□□□□□ -0.27
CLNS1A-201ENST00000263309 CSH1P0DML2 217 aa13.36□□□□□ -0.27
CLNS1A-201ENST00000263309 CSH2P0DML3 217 aa13.36□□□□□ -0.27
CLNS1A-201ENST00000263309 KRT5P13647 590 aa13.36□□□□□ -0.27
CLNS1A-201ENST00000263309 USP8P40818 1118 aa13.36□□□□□ -0.27
CLNS1A-201ENST00000263309 NDST1P52848 882 aa13.36□□□□□ -0.27
CLNS1A-201ENST00000263309 CDH8P55286 799 aa13.36□□□□□ -0.27
CLNS1A-201ENST00000263309 PTK2Q05397 1052 aa13.36□□□□□ -0.27
CLNS1A-201ENST00000263309 GSE1Q14687 1217 aa13.36□□□□□ -0.27
CLNS1A-201ENST00000263309 SYCP1Q15431 976 aa13.36□□□□□ -0.27
CLNS1A-201ENST00000263309 TSR1Q2NL82 804 aaKnown RBP13.36□□□□□ -0.27
CLNS1A-201ENST00000263309 TMC5Q6UXY8 1006 aa13.36□□□□□ -0.27
CLNS1A-201ENST00000263309 RNF19BQ6ZMZ0 732 aa13.36□□□□□ -0.27
CLNS1A-201ENST00000263309 PDZD4Q76G19 769 aaPredicted RBP13.36□□□□□ -0.27
CLNS1A-201ENST00000263309 OTOP3Q7RTS5 596 aa13.36□□□□□ -0.27
CLNS1A-201ENST00000263309 CACNA2D4Q7Z3S7 1137 aa13.36□□□□□ -0.27
CLNS1A-201ENST00000263309 SCN4BQ8IWT1 228 aa13.36□□□□□ -0.27
CLNS1A-201ENST00000263309 ZNF397Q8NF99 534 aaPredicted RBP13.36□□□□□ -0.27
CLNS1A-201ENST00000263309 IQCDQ96DY2 449 aa13.36□□□□□ -0.27
CLNS1A-201ENST00000263309 PGLYRP2Q96PD5 576 aa13.36□□□□□ -0.27
CLNS1A-201ENST00000263309 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.36□□□□□ -0.274e-8■■■■□ 23.5
CLNS1A-201ENST00000263309 ASAH2Q9NR71 780 aa13.36□□□□□ -0.27
CLNS1A-201ENST00000263309 CISHQ9NSE2 258 aa13.36□□□□□ -0.27
CLNS1A-201ENST00000263309 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.36□□□□□ -0.27
CLNS1A-201ENST00000263309 APEX2Q9UBZ4 518 aa13.36□□□□□ -0.27
CLNS1A-201ENST00000263309 PRKAG3Q9UGI9 489 aa13.36□□□□□ -0.27
CLNS1A-201ENST00000263309 LIMA1Q9UHB6 759 aaKnown RBP13.36□□□□□ -0.27
CLNS1A-201ENST00000263309 CEP83Q9Y592 693 aa13.36□□□□□ -0.27
CLNS1A-201ENST00000263309 ZFP37Q9Y6Q3 630 aaPredicted RBP13.36□□□□□ -0.27
CLNS1A-201ENST00000263309 LRRC10BA6NIK2 292 aa13.35□□□□□ -0.27
CLNS1A-201ENST00000263309 H3BQ06 376 aaPredicted RBP13.35□□□□□ -0.27
CLNS1A-201ENST00000263309 POU2F2P09086 479 aa13.35□□□□□ -0.27
CLNS1A-201ENST00000263309 PAEPP09466 180 aa13.35□□□□□ -0.27
CLNS1A-201ENST00000263309 CD19P15391 556 aa13.35□□□□□ -0.27
CLNS1A-201ENST00000263309 ACAT1P24752 427 aaKnown RBP13.35□□□□□ -0.27
CLNS1A-201ENST00000263309 GTF2F1P35269 517 aaKnown RBP eCLIP13.35□□□□□ -0.27
CLNS1A-201ENST00000263309 MAGEA11P43364 429 aa13.35□□□□□ -0.27
CLNS1A-201ENST00000263309 PPP3CCP48454 512 aa13.35□□□□□ -0.27
CLNS1A-201ENST00000263309 PDE6CP51160 858 aa13.35□□□□□ -0.27
CLNS1A-201ENST00000263309 COPB1P53618 953 aaKnown RBP13.35□□□□□ -0.27
CLNS1A-201ENST00000263309 TWF1Q12792 350 aa13.35□□□□□ -0.27
CLNS1A-201ENST00000263309 KRT31Q15323 416 aa13.35□□□□□ -0.27
CLNS1A-201ENST00000263309 CFAP221Q4G0U5 840 aa13.35□□□□□ -0.27
CLNS1A-201ENST00000263309 SGO2Q562F6 1265 aa13.35□□□□□ -0.27
CLNS1A-201ENST00000263309 MDH1BQ5I0G3 518 aa13.35□□□□□ -0.27
CLNS1A-201ENST00000263309 C1orf220Q5T0J3 134 aa13.35□□□□□ -0.27
CLNS1A-201ENST00000263309 CDKAL1Q5VV42 579 aa13.35□□□□□ -0.27
CLNS1A-201ENST00000263309 GPR149Q86SP6 731 aa13.35□□□□□ -0.27
CLNS1A-201ENST00000263309 CRYBG2Q8N1P7 616 aa13.35□□□□□ -0.27
CLNS1A-201ENST00000263309 CXorf38Q8TB03 319 aa13.35□□□□□ -0.27
CLNS1A-201ENST00000263309 CYFIP2Q96F07 1278 aa13.35□□□□□ -0.27
CLNS1A-201ENST00000263309 SMARCD1Q96GM5 515 aa13.35□□□□□ -0.27
CLNS1A-201ENST00000263309 ASB2Q96Q27 587 aa13.35□□□□□ -0.27
CLNS1A-201ENST00000263309 SPAG5Q96R06 1193 aa13.35□□□□□ -0.27
CLNS1A-201ENST00000263309 MRPL45Q9BRJ2 306 aaKnown RBP13.35□□□□□ -0.27
CLNS1A-201ENST00000263309 NUP58Q9BVL2 599 aa13.35□□□□□ -0.27
CLNS1A-201ENST00000263309 BCO2Q9BYV7 579 aa13.35□□□□□ -0.27
CLNS1A-201ENST00000263309 TAB2Q9NYJ8 693 aa13.35□□□□□ -0.27
CLNS1A-201ENST00000263309 SLC27A5Q9Y2P5 690 aa13.35□□□□□ -0.27
CLNS1A-201ENST00000263309 INSL5Q9Y5Q6 135 aa13.35□□□□□ -0.27
CLNS1A-201ENST00000263309 MTMR11A4FU01 709 aa13.34□□□□□ -0.27
CLNS1A-201ENST00000263309 LINC01565O15544 149 aa13.34□□□□□ -0.27
CLNS1A-201ENST00000263309 RTN3O95197 1032 aaPredicted RBP13.34□□□□□ -0.27
CLNS1A-201ENST00000263309 OR4Q2P0C623 313 aa13.34□□□□□ -0.27
CLNS1A-201ENST00000263309 VDRP11473 427 aa13.34□□□□□ -0.27
CLNS1A-201ENST00000263309 COL9A1P20849 921 aa13.34□□□□□ -0.27
CLNS1A-201ENST00000263309 LMO2P25791 158 aa13.34□□□□□ -0.27
CLNS1A-201ENST00000263309 ASPAP45381 313 aa13.34□□□□□ -0.27
CLNS1A-201ENST00000263309 UBASH3AP57075 661 aa13.34□□□□□ -0.27
CLNS1A-201ENST00000263309 PLCB2Q00722 1185 aa13.34□□□□□ -0.27
CLNS1A-201ENST00000263309 INCA1Q0VD86 236 aa13.34□□□□□ -0.27
CLNS1A-201ENST00000263309 CBX2Q14781 532 aaPredicted RBP13.34□□□□□ -0.27
CLNS1A-201ENST00000263309 CLUL1Q15846 466 aa13.34□□□□□ -0.27
CLNS1A-201ENST00000263309 ZNF394Q53GI3 561 aa13.34□□□□□ -0.27
CLNS1A-201ENST00000263309 SPOPLQ6IQ16 392 aa13.34□□□□□ -0.27
CLNS1A-201ENST00000263309 FAM171BQ6P995 826 aa13.34□□□□□ -0.27
CLNS1A-201ENST00000263309 TRIM65Q6PJ69 517 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms