RNA–Protein interactions for RNA: ENST00000261965.7

TUBGCP3-201, Transcript of tubulin gamma complex associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBGCP3, Length 3,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-201ENST00000261965 NMD3Q96D46 503 aaKnown RBP14.7□□□□□ -0.06
TUBGCP3-201ENST00000261965 VCX3BQ9H321 246 aa14.7□□□□□ -0.06
TUBGCP3-201ENST00000261965 MRPL47Q9HD33 250 aaKnown RBP14.7□□□□□ -0.06
TUBGCP3-201ENST00000261965 PCDHA10Q9Y5I2 948 aa14.7□□□□□ -0.06
TUBGCP3-201ENST00000261965 GJA3Q9Y6H8 435 aa14.7□□□□□ -0.06
TUBGCP3-201ENST00000261965 INO80B-WBP1J3KQ70 363 aa14.7□□□□□ -0.06
TUBGCP3-201ENST00000261965 K7ERI5 159 aa14.7□□□□□ -0.06
TUBGCP3-201ENST00000261965 ZNF862O60290 1169 aa14.7□□□□□ -0.06
TUBGCP3-201ENST00000261965 PGM5Q15124 567 aa14.7□□□□□ -0.06
TUBGCP3-201ENST00000261965 MCF2L2Q86YR7 1114 aa14.7□□□□□ -0.06
TUBGCP3-201ENST00000261965 NETO2Q8NC67 525 aa14.7□□□□□ -0.06
TUBGCP3-201ENST00000261965 TCP10LQ8TDR4 215 aa14.7□□□□□ -0.06
TUBGCP3-201ENST00000261965 CLPTM1LQ96KA5 538 aa14.7□□□□□ -0.06
TUBGCP3-201ENST00000261965 INO80BQ9C086 356 aaPredicted RBP14.7□□□□□ -0.06
TUBGCP3-201ENST00000261965 RPAP3Q9H6T3 665 aaPredicted RBP14.7□□□□□ -0.06
TUBGCP3-201ENST00000261965 WHRNQ9P202 907 aa14.7□□□□□ -0.06
TUBGCP3-201ENST00000261965 SLC9A2Q9UBY0 812 aa14.7□□□□□ -0.06
TUBGCP3-201ENST00000261965 GTF2H1P32780 548 aa14.69□□□□□ -0.06
TUBGCP3-201ENST00000261965 GEN1Q17RS7 908 aa14.69□□□□□ -0.06
TUBGCP3-201ENST00000261965 SNRNP48Q6IEG0 339 aaKnown RBP14.69□□□□□ -0.06
TUBGCP3-201ENST00000261965 OR5B17Q8NGF7 314 aa14.69□□□□□ -0.06
TUBGCP3-201ENST00000261965 PDCD2LQ9BRP1 358 aa14.69□□□□□ -0.06
TUBGCP3-201ENST00000261965 TBC1D22BQ9NU19 505 aa14.69□□□□□ -0.06
TUBGCP3-201ENST00000261965 C2CD2Q9Y426 696 aa14.69□□□□□ -0.06
TUBGCP3-201ENST00000261965 PCDHB2Q9Y5E7 798 aa14.69□□□□□ -0.06
TUBGCP3-201ENST00000261965 SPDYE5A6NIY4 337 aa14.69□□□□□ -0.06
TUBGCP3-201ENST00000261965 MGRN1O60291 552 aa14.69□□□□□ -0.06
TUBGCP3-201ENST00000261965 NR3C2P08235 984 aa14.69□□□□□ -0.06
TUBGCP3-201ENST00000261965 GHRP10912 638 aa14.69□□□□□ -0.06
TUBGCP3-201ENST00000261965 PRKCEQ02156 737 aa14.69□□□□□ -0.06
TUBGCP3-201ENST00000261965 NFX1Q12986 1120 aaKnown RBP14.69□□□□□ -0.06
TUBGCP3-201ENST00000261965 SLC27A3Q5K4L6 730 aa14.69□□□□□ -0.06
TUBGCP3-201ENST00000261965 CKAP2Q8WWK9 683 aa14.69□□□□□ -0.06
TUBGCP3-201ENST00000261965 ZNF570Q96NI8 536 aa14.69□□□□□ -0.06
TUBGCP3-201ENST00000261965 SENP7Q9BQF6 1050 aa14.69□□□□□ -0.06
TUBGCP3-201ENST00000261965 ROPN1BQ9BZX4 212 aaPredicted RBP14.69□□□□□ -0.06
TUBGCP3-201ENST00000261965 ROPN1Q9HAT0 212 aaPredicted RBP14.69□□□□□ -0.06
TUBGCP3-201ENST00000261965 FBXO40Q9UH90 709 aa14.69□□□□□ -0.06
TUBGCP3-201ENST00000261965 NOP56O00567 594 aaKnown RBP14.69□□□□□ -0.06
TUBGCP3-201ENST00000261965 USP1O94782 785 aa14.69□□□□□ -0.06
TUBGCP3-201ENST00000261965 ARL4CP56559 192 aa14.69□□□□□ -0.06
TUBGCP3-201ENST00000261965 NUDCD3Q8IVD9 361 aa14.69□□□□□ -0.06
TUBGCP3-201ENST00000261965 GALNT4Q8N4A0 578 aa14.69□□□□□ -0.06
TUBGCP3-201ENST00000261965 CCNYQ8ND76 341 aa14.69□□□□□ -0.06
TUBGCP3-201ENST00000261965 VPS11Q9H270 941 aa14.69□□□□□ -0.06
TUBGCP3-201ENST00000261965 ACSS2Q9NR19 701 aa14.69□□□□□ -0.06
TUBGCP3-201ENST00000261965 NDE1Q9NXR1 346 aa14.69□□□□□ -0.06
TUBGCP3-201ENST00000261965 MCF2LO15068 1137 aa14.68□□□□□ -0.06
TUBGCP3-201ENST00000261965 ATP4AP20648 1035 aa14.68□□□□□ -0.06
TUBGCP3-201ENST00000261965 HIRAP54198 1017 aaPredicted RBP14.68□□□□□ -0.06
TUBGCP3-201ENST00000261965 CYTH1Q15438 398 aa14.68□□□□□ -0.06
TUBGCP3-201ENST00000261965 TDRD10Q5VZ19 366 aaKnown RBP14.68□□□□□ -0.06
TUBGCP3-201ENST00000261965 ZBTB46Q86UZ6 589 aa14.68□□□□□ -0.06
TUBGCP3-201ENST00000261965 PPP4R1Q8TF05 950 aa14.68□□□□□ -0.06
TUBGCP3-201ENST00000261965 UCMAQ8WVF2 138 aa14.68□□□□□ -0.06
TUBGCP3-201ENST00000261965 SCG3Q8WXD2 468 aaKnown RBP14.68□□□□□ -0.06
TUBGCP3-201ENST00000261965 USP6NLQ92738 828 aa14.68□□□□□ -0.06
TUBGCP3-201ENST00000261965 SRRM3A6NNA2 597 aaPredicted RBP14.68□□□□□ -0.06
TUBGCP3-201ENST00000261965 P4HA2O15460 535 aa14.68□□□□□ -0.06
TUBGCP3-201ENST00000261965 PDE5AO76074 875 aa14.68□□□□□ -0.06
TUBGCP3-201ENST00000261965 PROSCO94903 275 aa14.68□□□□□ -0.06
TUBGCP3-201ENST00000261965 PAPOLAP51003 745 aaKnown RBP14.68□□□□□ -0.06
TUBGCP3-201ENST00000261965 WDR4P57081 412 aaKnown RBP14.68□□□□□ -0.06
TUBGCP3-201ENST00000261965 ALCAMQ13740 583 aa14.68□□□□□ -0.06
TUBGCP3-201ENST00000261965 TRIP10Q15642 601 aa14.68□□□□□ -0.06
TUBGCP3-201ENST00000261965 OR6B2Q6IFH4 312 aa14.68□□□□□ -0.06
TUBGCP3-201ENST00000261965 CCDC60Q8IWA6 550 aaPredicted RBP14.68□□□□□ -0.06
TUBGCP3-201ENST00000261965 AGGF1Q8N302 714 aaeCLIP14.68□□□□□ -0.06
TUBGCP3-201ENST00000261965 NME8Q8N427 588 aa14.68□□□□□ -0.06
TUBGCP3-201ENST00000261965 RAB6BQ9NRW1 208 aa14.68□□□□□ -0.06
TUBGCP3-201ENST00000261965 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.68□□□□□ -0.06
TUBGCP3-201ENST00000261965 ARFGEF1Q9Y6D6 1849 aa14.68□□□□□ -0.06
TUBGCP3-201ENST00000261965 GOLGA4Q13439 2230 aaKnown RBP14.68□□□□□ -0.06
TUBGCP3-201ENST00000261965 PTPRJQ12913 1337 aa14.68□□□□□ -0.06
TUBGCP3-201ENST00000261965 UNC5CO95185 931 aa14.68□□□□□ -0.06
TUBGCP3-201ENST00000261965 HADHQ16836 314 aaKnown RBP14.68□□□□□ -0.06
TUBGCP3-201ENST00000261965 RFWD3Q6PCD5 774 aa14.68□□□□□ -0.06
TUBGCP3-201ENST00000261965 PCGF5Q86SE9 256 aa14.68□□□□□ -0.06
TUBGCP3-201ENST00000261965 ZNF354CQ86Y25 554 aa14.68□□□□□ -0.06
TUBGCP3-201ENST00000261965 FAM13CQ8NE31 585 aa14.68□□□□□ -0.06
TUBGCP3-201ENST00000261965 NLRP4Q96MN2 994 aa14.68□□□□□ -0.06
TUBGCP3-201ENST00000261965 MANSC1Q9H8J5 431 aa14.68□□□□□ -0.06
TUBGCP3-201ENST00000261965 SLC12A4Q9UP95 1085 aa14.68□□□□□ -0.06
TUBGCP3-201ENST00000261965 BTAF1O14981 1849 aa14.68□□□□□ -0.06
TUBGCP3-201ENST00000261965 BHMG1C9JSJ3 638 aaPredicted RBP14.67□□□□□ -0.06
TUBGCP3-201ENST00000261965 SPECC1L-ADORA2AF8WAN1 911 aa14.67□□□□□ -0.06
TUBGCP3-201ENST00000261965 ZMPSTE24O75844 475 aa14.67□□□□□ -0.06
TUBGCP3-201ENST00000261965 MSX2P35548 267 aaPredicted RBP14.67□□□□□ -0.06
TUBGCP3-201ENST00000261965 PTK7Q13308 1070 aa14.67□□□□□ -0.06
TUBGCP3-201ENST00000261965 RSBN1LQ6PCB5 846 aaPredicted RBP14.67□□□□□ -0.06
TUBGCP3-201ENST00000261965 IZUMO2Q6UXV1 221 aa14.67□□□□□ -0.06
TUBGCP3-201ENST00000261965 FBXO36Q8NEA4 188 aa14.67□□□□□ -0.06
TUBGCP3-201ENST00000261965 CLEC4DQ8WXI8 215 aa14.67□□□□□ -0.06
TUBGCP3-201ENST00000261965 DDX1Q92499 740 aaKnown RBP14.67□□□□□ -0.06
TUBGCP3-201ENST00000261965 MTBPQ96DY7 904 aa14.67□□□□□ -0.06
TUBGCP3-201ENST00000261965 FAM81BQ96LP2 452 aa14.67□□□□□ -0.06
TUBGCP3-201ENST00000261965 MAGEB18Q96M61 343 aa14.67□□□□□ -0.06
TUBGCP3-201ENST00000261965 UNKQ9C0B0 810 aaKnown RBP14.67□□□□□ -0.06
TUBGCP3-201ENST00000261965 TAC1P20366 129 aa14.67□□□□□ -0.06
TUBGCP3-201ENST00000261965 GPC3P51654 580 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms