RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 SLC24A3Q9HC58 644 aa20.36■□□□□ 0.85
SCARB1-201ENST00000261693 AGTPBP1Q9UPW5 1226 aa20.36■□□□□ 0.85
SCARB1-201ENST00000261693 SHOC2Q9UQ13 582 aa20.36■□□□□ 0.85
SCARB1-201ENST00000261693 ENTPD5O75356 428 aa20.35■□□□□ 0.85
SCARB1-201ENST00000261693 ITGAVP06756 1048 aa20.35■□□□□ 0.85
SCARB1-201ENST00000261693 SLC18A1P54219 525 aa20.35■□□□□ 0.85
SCARB1-201ENST00000261693 MCL1Q07820 350 aa20.35■□□□□ 0.85
SCARB1-201ENST00000261693 C3orf62Q6ZUJ4 267 aa20.35■□□□□ 0.85
SCARB1-201ENST00000261693 FLAD1Q8NFF5 587 aa20.35■□□□□ 0.85
SCARB1-201ENST00000261693 PCDH9Q9HC56 1237 aa20.35■□□□□ 0.85
SCARB1-201ENST00000261693 SLC24A2Q9UI40 661 aa20.35■□□□□ 0.85
SCARB1-201ENST00000261693 CNTN6Q9UQ52 1028 aa20.35■□□□□ 0.85
SCARB1-201ENST00000261693 STYXL1Q9Y6J8 313 aa20.35■□□□□ 0.85
SCARB1-201ENST00000261693 GNAZP19086 355 aa20.35■□□□□ 0.85
SCARB1-201ENST00000261693 CALB2P22676 271 aa20.35■□□□□ 0.85
SCARB1-201ENST00000261693 FKBP1CQ5VVH2 108 aa20.35■□□□□ 0.85
SCARB1-201ENST00000261693 RFWD2Q8NHY2 731 aa20.35■□□□□ 0.85
SCARB1-201ENST00000261693 TCP10LQ8TDR4 215 aa20.35■□□□□ 0.85
SCARB1-201ENST00000261693 INPP5DQ92835 1189 aa20.35■□□□□ 0.85
SCARB1-201ENST00000261693 CYP39A1Q9NYL5 469 aa20.35■□□□□ 0.85
SCARB1-201ENST00000261693 SLC17A7Q9P2U7 560 aa20.35■□□□□ 0.85
SCARB1-201ENST00000261693 COL4A5P29400 1685 aa20.35■□□□□ 0.85
SCARB1-201ENST00000261693 CNTNAP2Q9UHC6 1331 aa20.35■□□□□ 0.85
SCARB1-201ENST00000261693 TTLL13PA6NNM8 815 aa20.34■□□□□ 0.85
SCARB1-201ENST00000261693 H0YCG3 227 aa20.34■□□□□ 0.85
SCARB1-201ENST00000261693 CALB1P05937 261 aa20.34■□□□□ 0.85
SCARB1-201ENST00000261693 TNFSF9P41273 254 aa20.34■□□□□ 0.85
SCARB1-201ENST00000261693 ABL2P42684 1182 aa20.34■□□□□ 0.85
SCARB1-201ENST00000261693 OTUD4Q01804 1114 aaKnown RBP20.34■□□□□ 0.85
SCARB1-201ENST00000261693 EFHC2Q5JST6 749 aa20.34■□□□□ 0.85
SCARB1-201ENST00000261693 GPAT2Q6NUI2 795 aa20.34■□□□□ 0.85
SCARB1-201ENST00000261693 ABHD15Q6UXT9 468 aa20.34■□□□□ 0.85
SCARB1-201ENST00000261693 ACTL9Q8TC94 416 aa20.34■□□□□ 0.85
SCARB1-201ENST00000261693 NKD2Q969F2 451 aaPredicted RBP20.34■□□□□ 0.85
SCARB1-201ENST00000261693 PAFAH2Q99487 392 aa20.34■□□□□ 0.85
SCARB1-201ENST00000261693 WDR83Q9BRX9 315 aaKnown RBP20.34■□□□□ 0.85
SCARB1-201ENST00000261693 CYLDQ9NQC7 956 aa20.34■□□□□ 0.85
SCARB1-201ENST00000261693 PSME4Q14997 1843 aa20.34■□□□□ 0.85
SCARB1-201ENST00000261693 TCRBV7S3A2A0A539 114 aa20.34■□□□□ 0.85
SCARB1-201ENST00000261693 TCRBV5S1A1TA0A578 114 aa20.34■□□□□ 0.85
SCARB1-201ENST00000261693 DKC1O60832 514 aaKnown RBP eCLIP20.34■□□□□ 0.851e-7■■■■□ 19.3
SCARB1-201ENST00000261693 UPP2O95045 317 aa20.34■□□□□ 0.85
SCARB1-201ENST00000261693 SYCP2LQ5T4T6 812 aa20.34■□□□□ 0.85
SCARB1-201ENST00000261693 SNRNP48Q6IEG0 339 aaKnown RBP20.34■□□□□ 0.85
SCARB1-201ENST00000261693 SCARA5Q6ZMJ2 495 aa20.34■□□□□ 0.85
SCARB1-201ENST00000261693 STK32AQ8WU08 396 aa20.34■□□□□ 0.85
SCARB1-201ENST00000261693 CPT1BQ92523 772 aa20.34■□□□□ 0.85
SCARB1-201ENST00000261693 NAF1Q96HR8 494 aaKnown RBP20.34■□□□□ 0.85
SCARB1-201ENST00000261693 IMPG2Q9BZV3 1241 aa20.34■□□□□ 0.85
SCARB1-201ENST00000261693 FER1L6Q2WGJ9 1857 aa20.33■□□□□ 0.85
SCARB1-201ENST00000261693 A0A0G2JND7 137 aa20.33■□□□□ 0.85
SCARB1-201ENST00000261693 WEE2P0C1S8 567 aa20.33■□□□□ 0.85
SCARB1-201ENST00000261693 TPBGLP0DKB5 382 aa20.33■□□□□ 0.85
SCARB1-201ENST00000261693 ATP4AP20648 1035 aa20.33■□□□□ 0.85
SCARB1-201ENST00000261693 CCNG1P51959 295 aa20.33■□□□□ 0.85
SCARB1-201ENST00000261693 NRLP54845 237 aa20.33■□□□□ 0.85
SCARB1-201ENST00000261693 FYB2Q5VWT5 728 aa20.33■□□□□ 0.85
SCARB1-201ENST00000261693 ZBTB33Q86T24 672 aa20.33■□□□□ 0.85
SCARB1-201ENST00000261693 WDTC1Q8N5D0 677 aa20.33■□□□□ 0.85
SCARB1-201ENST00000261693 FBXO36Q8NEA4 188 aa20.33■□□□□ 0.85
SCARB1-201ENST00000261693 DENND2DQ9H6A0 471 aaPredicted RBP20.33■□□□□ 0.85
SCARB1-201ENST00000261693 TJP2Q9UDY2 1190 aa20.33■□□□□ 0.85
SCARB1-201ENST00000261693 ZNRF3Q9ULT6 936 aa20.33■□□□□ 0.85
SCARB1-201ENST00000261693 FARP1Q9Y4F1 1045 aaPredicted RBP20.33■□□□□ 0.85
SCARB1-201ENST00000261693 A0A0B4J269 797 aa20.33■□□□□ 0.84
SCARB1-201ENST00000261693 ZNF132P52740 706 aa20.33■□□□□ 0.84
SCARB1-201ENST00000261693 MYL6P60660 151 aa20.33■□□□□ 0.84
SCARB1-201ENST00000261693 SP2Q02086 613 aa20.33■□□□□ 0.84
SCARB1-201ENST00000261693 MAP3K10Q02779 954 aa20.33■□□□□ 0.84
SCARB1-201ENST00000261693 BBS9Q3SYG4 887 aa20.33■□□□□ 0.84
SCARB1-201ENST00000261693 XKR3Q5GH77 459 aa20.33■□□□□ 0.84
SCARB1-201ENST00000261693 LRRC38Q5VT99 294 aa20.33■□□□□ 0.84
SCARB1-201ENST00000261693 SLC35B2Q8TB61 432 aa20.33■□□□□ 0.84
SCARB1-201ENST00000261693 LBHD1Q9BQE6 289 aaPredicted RBP20.33■□□□□ 0.84
SCARB1-201ENST00000261693 MTMR12Q9C0I1 747 aa20.33■□□□□ 0.84
SCARB1-201ENST00000261693 CST8O60676 142 aa20.32■□□□□ 0.84
SCARB1-201ENST00000261693 ZWINTO95229 277 aa20.32■□□□□ 0.84
SCARB1-201ENST00000261693 PSEN1P49768 467 aa20.32■□□□□ 0.84
SCARB1-201ENST00000261693 CLNKQ7Z7G1 428 aa20.32■□□□□ 0.84
SCARB1-201ENST00000261693 NSUN6Q8TEA1 469 aaKnown RBP20.32■□□□□ 0.84
SCARB1-201ENST00000261693 TFAP2BQ92481 460 aa20.32■□□□□ 0.84
SCARB1-201ENST00000261693 CISHQ9NSE2 258 aa20.32■□□□□ 0.84
SCARB1-201ENST00000261693 KANSL3Q9P2N6 904 aa20.32■□□□□ 0.84
SCARB1-201ENST00000261693 CD48P09326 243 aa20.32■□□□□ 0.84
SCARB1-201ENST00000261693 RFC1P35251 1148 aaPredicted RBP20.32■□□□□ 0.84
SCARB1-201ENST00000261693 RASSF2P50749 326 aa20.32■□□□□ 0.84
SCARB1-201ENST00000261693 ARL4CP56559 192 aa20.32■□□□□ 0.84
SCARB1-201ENST00000261693 SLFN12LQ6IEE8 588 aa20.32■□□□□ 0.84
SCARB1-201ENST00000261693 PPIL6Q8IXY8 311 aa20.32■□□□□ 0.84
SCARB1-201ENST00000261693 TMEM35BQ8NCS4 154 aa20.32■□□□□ 0.84
SCARB1-201ENST00000261693 PTPRN2Q92932 1015 aa20.32■□□□□ 0.84
SCARB1-201ENST00000261693 C3orf70A6NLC5 250 aaPredicted RBP20.31■□□□□ 0.84
SCARB1-201ENST00000261693 SMNDC1O75940 238 aaKnown RBP eCLIP20.31■□□□□ 0.846e-24■■■■■ 32.4
SCARB1-201ENST00000261693 PSMA2P25787 234 aa20.31■□□□□ 0.84
SCARB1-201ENST00000261693 IL1R2P27930 398 aa20.31■□□□□ 0.84
SCARB1-201ENST00000261693 PHBP35232 272 aa20.31■□□□□ 0.84
SCARB1-201ENST00000261693 PIGHQ14442 188 aaPredicted RBP20.31■□□□□ 0.84
SCARB1-201ENST00000261693 SLC45A4Q5BKX6 768 aa20.31■□□□□ 0.84
SCARB1-201ENST00000261693 RFWD3Q6PCD5 774 aa20.31■□□□□ 0.84
SCARB1-201ENST00000261693 LRRC6Q86X45 466 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms