RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 CYP24A1Q07973 514 aa16.71■□□□□ 0.27
LMNB1-201ENST00000261366 RNASEH2BQ5TBB1 312 aaKnown RBP16.71■□□□□ 0.27
LMNB1-201ENST00000261366 TATDN1Q6P1N9 297 aa16.71■□□□□ 0.27
LMNB1-201ENST00000261366 RGS9BPQ6ZS82 235 aa16.71■□□□□ 0.27
LMNB1-201ENST00000261366 LDHDQ86WU2 507 aa16.71■□□□□ 0.27
LMNB1-201ENST00000261366 MFN1Q8IWA4 741 aa16.71■□□□□ 0.27
LMNB1-201ENST00000261366 EXD1Q8NHP7 514 aa16.71■□□□□ 0.27
LMNB1-201ENST00000261366 SHKBP1Q8TBC3 707 aa16.71■□□□□ 0.27
LMNB1-201ENST00000261366 PTCD3Q96EY7 689 aaKnown RBP16.71■□□□□ 0.27
LMNB1-201ENST00000261366 SENP1Q9P0U3 644 aa16.71■□□□□ 0.27
LMNB1-201ENST00000261366 LNPEPQ9UIQ6 1025 aa16.71■□□□□ 0.27
LMNB1-201ENST00000261366 TCP10L2B9ZVM9 353 aa16.71■□□□□ 0.27
LMNB1-201ENST00000261366 FCHO1O14526 889 aa16.71■□□□□ 0.27
LMNB1-201ENST00000261366 TJP3O95049 919 aa16.71■□□□□ 0.27
LMNB1-201ENST00000261366 ZWINTO95229 277 aa16.71■□□□□ 0.27
LMNB1-201ENST00000261366 RPS6KA3P51812 740 aa16.71■□□□□ 0.27
LMNB1-201ENST00000261366 SGSM1Q2NKQ1 1148 aa16.71■□□□□ 0.27
LMNB1-201ENST00000261366 WDR44Q5JSH3 913 aa16.71■□□□□ 0.27
LMNB1-201ENST00000261366 DCUN1D2Q6PH85 259 aa16.71■□□□□ 0.27
LMNB1-201ENST00000261366 IZUMO2Q6UXV1 221 aa16.71■□□□□ 0.27
LMNB1-201ENST00000261366 PODNQ7Z5L7 613 aa16.71■□□□□ 0.27
LMNB1-201ENST00000261366 TMEM161BQ8NDZ6 487 aa16.71■□□□□ 0.27
LMNB1-201ENST00000261366 SYNCQ9H7C4 482 aa16.71■□□□□ 0.27
LMNB1-201ENST00000261366 AVENQ9NQS1 362 aaPredicted RBP16.71■□□□□ 0.27
LMNB1-201ENST00000261366 SAR1AQ9NR31 198 aa16.71■□□□□ 0.27
LMNB1-201ENST00000261366 KRT82Q9NSB4 513 aa16.71■□□□□ 0.27
LMNB1-201ENST00000261366 ALOX15BO15296 676 aa16.71■□□□□ 0.26
LMNB1-201ENST00000261366 FAM155BO75949 473 aa16.71■□□□□ 0.26
LMNB1-201ENST00000261366 MT-ND3P03897 115 aa16.71■□□□□ 0.26
LMNB1-201ENST00000261366 PSMC5P62195 406 aa16.71■□□□□ 0.26
LMNB1-201ENST00000261366 BASP1P80723 227 aaKnown RBP16.71■□□□□ 0.26
LMNB1-201ENST00000261366 DMP1Q13316 513 aaPredicted RBP16.71■□□□□ 0.26
LMNB1-201ENST00000261366 IRAK4Q9NWZ3 460 aa16.71■□□□□ 0.26
LMNB1-201ENST00000261366 AGTPBP1Q9UPW5 1226 aa16.71■□□□□ 0.26
LMNB1-201ENST00000261366 H0YIN7 160 aa16.7■□□□□ 0.26
LMNB1-201ENST00000261366 PYGBP11216 843 aa16.7■□□□□ 0.26
LMNB1-201ENST00000261366 RELL1Q8IUW5 271 aa16.7■□□□□ 0.26
LMNB1-201ENST00000261366 SH3TC2Q8TF17 1288 aa16.7■□□□□ 0.26
LMNB1-201ENST00000261366 FAM81BQ96LP2 452 aa16.7■□□□□ 0.26
LMNB1-201ENST00000261366 FNBP1Q96RU3 617 aa16.7■□□□□ 0.26
LMNB1-201ENST00000261366 THTPAQ9BU02 230 aa16.7■□□□□ 0.26
LMNB1-201ENST00000261366 GLIS2Q9BZE0 524 aaPredicted RBP16.7■□□□□ 0.26
LMNB1-201ENST00000261366 TLE6Q9H808 572 aa16.7■□□□□ 0.26
LMNB1-201ENST00000261366 KCNK13Q9HB14 408 aa16.7■□□□□ 0.26
LMNB1-201ENST00000261366 PPARGC1AQ9UBK2 798 aaKnown RBP16.7■□□□□ 0.26
LMNB1-201ENST00000261366 CLRN2A0PK11 232 aa16.7■□□□□ 0.26
LMNB1-201ENST00000261366 MEI4A8MW99 385 aa16.7■□□□□ 0.26
LMNB1-201ENST00000261366 HLA-DRAP01903 254 aa16.7■□□□□ 0.26
LMNB1-201ENST00000261366 RASA2Q15283 850 aa16.7■□□□□ 0.26
LMNB1-201ENST00000261366 CYP4A22Q5TCH4 519 aa16.7■□□□□ 0.26
LMNB1-201ENST00000261366 TDRPQ86YL5 185 aa16.7■□□□□ 0.26
LMNB1-201ENST00000261366 C12orf56Q8IXR9 622 aa16.7■□□□□ 0.26
LMNB1-201ENST00000261366 SERAC1Q96JX3 654 aa16.7■□□□□ 0.26
LMNB1-201ENST00000261366 EHMT1Q9H9B1 1298 aa16.7■□□□□ 0.26
LMNB1-201ENST00000261366 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.7■□□□□ 0.26
LMNB1-201ENST00000261366 PCMTD2Q9NV79 361 aa16.7■□□□□ 0.26
LMNB1-201ENST00000261366 SCAF8Q9UPN6 1271 aaKnown RBP16.7■□□□□ 0.26
LMNB1-201ENST00000261366 COQ4Q9Y3A0 265 aa16.7■□□□□ 0.26
LMNB1-201ENST00000261366 NOMO3P69849 1222 aa16.69■□□□□ 0.26
LMNB1-201ENST00000261366 IRX4P78413 519 aa16.69■□□□□ 0.26
LMNB1-201ENST00000261366 CDK16Q00536 496 aa16.69■□□□□ 0.26
LMNB1-201ENST00000261366 LMNB2Q03252 620 aa16.69■□□□□ 0.26
LMNB1-201ENST00000261366 MORF4L2Q15014 288 aa16.69■□□□□ 0.26
LMNB1-201ENST00000261366 CFAP157Q5JU67 520 aa16.69■□□□□ 0.26
LMNB1-201ENST00000261366 SPOCD1Q6ZMY3 1216 aa16.69■□□□□ 0.26
LMNB1-201ENST00000261366 ZNF276Q8N554 614 aa16.69■□□□□ 0.26
LMNB1-201ENST00000261366 ZNF184Q99676 751 aaPredicted RBP16.69■□□□□ 0.26
LMNB1-201ENST00000261366 WDR83Q9BRX9 315 aaKnown RBP16.69■□□□□ 0.26
LMNB1-201ENST00000261366 MRPL47Q9HD33 250 aaKnown RBP16.69■□□□□ 0.26
LMNB1-201ENST00000261366 MRPL11Q9Y3B7 192 aaKnown RBP16.69■□□□□ 0.26
LMNB1-201ENST00000261366 ASTN2O75129 1339 aaPredicted RBP16.69■□□□□ 0.26
LMNB1-201ENST00000261366 ECE2O60344 883 aa16.69■□□□□ 0.26
LMNB1-201ENST00000261366 RTN3O95197 1032 aaPredicted RBP16.69■□□□□ 0.26
LMNB1-201ENST00000261366 LAMB3Q13751 1172 aa16.69■□□□□ 0.26
LMNB1-201ENST00000261366 B3GNT9Q6UX72 402 aa16.69■□□□□ 0.26
LMNB1-201ENST00000261366 CTAGE3PQ8IX95 158 aa16.69■□□□□ 0.26
LMNB1-201ENST00000261366 KCTD17Q8N5Z5 321 aa16.69■□□□□ 0.26
LMNB1-201ENST00000261366 HIPK4Q8NE63 616 aa16.69■□□□□ 0.26
LMNB1-201ENST00000261366 FEZF2Q8TBJ5 459 aa16.69■□□□□ 0.26
LMNB1-201ENST00000261366 ZDHHC15Q96MV8 337 aa16.69■□□□□ 0.26
LMNB1-201ENST00000261366 TUBGCP5Q96RT8 1024 aa16.69■□□□□ 0.26
LMNB1-201ENST00000261366 SENP7Q9BQF6 1050 aa16.69■□□□□ 0.26
LMNB1-201ENST00000261366 EXOC7Q9UPT5 735 aa16.69■□□□□ 0.26
LMNB1-201ENST00000261366 IKBKGQ9Y6K9 419 aa16.69■□□□□ 0.26
LMNB1-201ENST00000261366 PCNTO95613 3336 aa16.69■□□□□ 0.26
LMNB1-201ENST00000261366 PTPRJQ12913 1337 aa16.69■□□□□ 0.26
LMNB1-201ENST00000261366 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.68■□□□□ 0.26
LMNB1-201ENST00000261366 DHX15O43143 795 aaKnown RBP16.68■□□□□ 0.26
LMNB1-201ENST00000261366 VCPP55072 806 aaKnown RBP16.68■□□□□ 0.26
LMNB1-201ENST00000261366 OGDHQ02218 1023 aa16.68■□□□□ 0.26
LMNB1-201ENST00000261366 FAAP100Q0VG06 881 aa16.68■□□□□ 0.26
LMNB1-201ENST00000261366 MTMR1Q13613 665 aa16.68■□□□□ 0.26
LMNB1-201ENST00000261366 AOC3Q16853 763 aa16.68■□□□□ 0.26
LMNB1-201ENST00000261366 EFHC2Q5JST6 749 aa16.68■□□□□ 0.26
LMNB1-201ENST00000261366 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.68■□□□□ 0.26
LMNB1-201ENST00000261366 TREML1Q86YW5 311 aa16.68■□□□□ 0.26
LMNB1-201ENST00000261366 OGFOD1Q8N543 542 aa16.68■□□□□ 0.26
LMNB1-201ENST00000261366 OXNAD1Q96HP4 312 aaPredicted RBP16.68■□□□□ 0.26
LMNB1-201ENST00000261366 SLC13A1Q9BZW2 595 aa16.68■□□□□ 0.26
LMNB1-201ENST00000261366 SLC24A2Q9UI40 661 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms