RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 CEP170P1Q96L14 293 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 SLC4A5Q9BY07 1137 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 HESX1Q9UBX0 185 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 APEX2Q9UBZ4 518 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 DDX20Q9UHI6 824 aaKnown RBP6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 V9GYY5 206 aaPredicted RBP6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 DNAH3Q8TD57 4116 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 ZFHX2Q9C0A1 2572 aaPredicted RBP6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 PSEN2P49810 448 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 LBX1P52954 281 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 GALCP54803 685 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 CCDC14Q49A88 953 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 ZPBP2Q6X784 338 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 ARHGAP36Q6ZRI8 547 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 FASTKD5Q7L8L6 764 aaKnown RBP6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 TMEM110Q86TL2 294 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 MSL3Q8N5Y2 521 aaKnown RBP6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 RIN2Q8WYP3 895 aaPredicted RBP6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 ZNF778Q96MU6 729 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 FBRSL1Q9HCM7 1045 aaKnown RBP6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 NLRC4Q9NPP4 1024 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 RBM12Q9NTZ6 932 aaKnown RBP6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 NUP210LQ5VU65 1888 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 EIF3CLB5ME19 914 aaKnown RBP6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 TOP3BO95985 862 aaKnown RBP6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 TPM1P09493 284 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 CYP2C18P33260 490 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 UBASH3AP57075 661 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 MMRN1Q13201 1228 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 PTK7Q13308 1070 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 SLC35F6Q8N357 371 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 ARNTL2Q8WYA1 636 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 PRICKLE1Q96MT3 831 aaPredicted RBP6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 NACC1Q96RE7 527 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 EIF3CQ99613 913 aaKnown RBP6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 PIGVQ9NUD9 493 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 TRMT1Q9NXH9 659 aaKnown RBP6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 TMPRSS11EQ9UL52 423 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 FARP1Q9Y4F1 1045 aaPredicted RBP6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 CDY2AQ9Y6F7 541 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 STAG3L1P0CL83 205 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 ARSAP15289 507 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 BRCC3P46736 316 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 ERVFC1P60507 584 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 VSNL1P62760 191 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 TNFAIP2Q03169 654 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 DDX42Q86XP3 938 aaKnown RBP eCLIP6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 OR6Y1Q8NGX8 325 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 ZNF707Q96C28 371 aaPredicted RBP6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 CEP63Q96MT8 703 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 FAM118BQ9BPY3 351 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 TENM1Q9UKZ4 2725 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 A0A1B0GTL3 188 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 CSF2RAP15509 400 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 CCND2P30279 289 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 GCLCP48506 637 aaPredicted RBP6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 AKAP17AQ02040 695 aaKnown RBP6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 SP3Q02447 781 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 PSMD2Q13200 908 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 MYBPC2Q14324 1141 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 CYP1B1Q16678 543 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 CCDC70Q6NSX1 233 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 RHPN2Q8IUC4 686 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 MYOCDQ8IZQ8 938 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 TXLNBQ8N3L3 684 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 INTS2Q9H0H0 1204 aaKnown RBP6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 CD93Q9NPY3 652 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 FBXW11Q9UKB1 542 aa6.07□□□□□ -1.44
TOPBP1-201ENST00000260810 WDR27A2RRH5 827 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 C1QCP02747 245 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 TPM3P06753 285 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 TAF1CQ15572 869 aaPredicted RBP6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 TMC6Q7Z403 805 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 NLRP14Q86W24 1093 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 ANKRD20A12PQ8NF67 263 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 DBF4BQ8NFT6 615 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 TEKT3Q9BXF9 490 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 ZNF334Q9HCZ1 680 aaPredicted RBP6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 CLUHO75153 1309 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 MANSC4A6NHS7 340 aaPredicted RBP6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 YJEFN3A6XGL0 299 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 E7ENQ6 273 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 STX10O60499 249 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 OLFM2O95897 454 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 HLA-DRAP01903 254 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 CYP11A1P05108 521 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 ASIC1P78348 528 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 HSP90AA2PQ14568 343 aaPredicted RBP6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 MAN2A1Q16706 1144 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 CT47A1Q5JQC4 288 aaPredicted RBP6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 PM20D1Q6GTS8 502 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 PHLDB2Q86SQ0 1253 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 ADGRF2Q8IZF7 708 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 SMARCE1Q969G3 411 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 MOCOSQ96EN8 888 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 GDF15Q99988 308 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 DNM3Q9UQ16 869 aa6.06□□□□□ -1.44
TOPBP1-201ENST00000260810 FAN1Q9Y2M0 1017 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms