RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 TSPAN16Q9UKR8 245 aa10.03□□□□□ -0.8
NIP7-202ENST00000254941 SAR1BQ9Y6B6 198 aa10.03□□□□□ -0.8
NIP7-202ENST00000254941 PTPRDP23468 1912 aa10.03□□□□□ -0.8
NIP7-202ENST00000254941 HOXA2O43364 376 aa10.02□□□□□ -0.8
NIP7-202ENST00000254941 B4GALT3O60512 393 aa10.02□□□□□ -0.8
NIP7-202ENST00000254941 DDHD2O94830 711 aa10.02□□□□□ -0.8
NIP7-202ENST00000254941 FTCDO95954 541 aa10.02□□□□□ -0.8
NIP7-202ENST00000254941 CALB1P05937 261 aa10.02□□□□□ -0.8
NIP7-202ENST00000254941 PDGFRBP09619 1106 aa10.02□□□□□ -0.8
NIP7-202ENST00000254941 GPD2P43304 727 aa10.02□□□□□ -0.8
NIP7-202ENST00000254941 LHX1P48742 406 aa10.02□□□□□ -0.8
NIP7-202ENST00000254941 TERF1P54274 439 aa10.02□□□□□ -0.8
NIP7-202ENST00000254941 C2CD6Q53TS8 623 aa10.02□□□□□ -0.8
NIP7-202ENST00000254941 PPP1R26Q5T8A7 1209 aaPredicted RBP10.02□□□□□ -0.8
NIP7-202ENST00000254941 LIN9Q5TKA1 542 aa10.02□□□□□ -0.8
NIP7-202ENST00000254941 ARHGAP17Q68EM7 881 aa10.02□□□□□ -0.8
NIP7-202ENST00000254941 PLEKHA7Q6IQ23 1121 aa10.02□□□□□ -0.8
NIP7-202ENST00000254941 CNKSR3Q6P9H4 555 aa10.02□□□□□ -0.8
NIP7-202ENST00000254941 CD300LGQ6UXG3 332 aa10.02□□□□□ -0.8
NIP7-202ENST00000254941 DSTYKQ6XUX3 929 aa10.02□□□□□ -0.8
NIP7-202ENST00000254941 DAAM2Q86T65 1068 aa10.02□□□□□ -0.8
NIP7-202ENST00000254941 OSTM1Q86WC4 334 aa10.02□□□□□ -0.8
NIP7-202ENST00000254941 ERICH1Q86X53 443 aa10.02□□□□□ -0.8
NIP7-202ENST00000254941 ZNF280BQ86YH2 543 aa10.02□□□□□ -0.8
NIP7-202ENST00000254941 COLGALT2Q8IYK4 626 aa10.02□□□□□ -0.8
NIP7-202ENST00000254941 ABI1Q8IZP0 508 aa10.02□□□□□ -0.8
NIP7-202ENST00000254941 MYRIPQ8NFW9 859 aa10.02□□□□□ -0.8
NIP7-202ENST00000254941 ZNF564Q8TBZ8 553 aaPredicted RBP10.02□□□□□ -0.8
NIP7-202ENST00000254941 SPATA18Q8TC71 538 aa10.02□□□□□ -0.8
NIP7-202ENST00000254941 CASD1Q96PB1 797 aa10.02□□□□□ -0.8
NIP7-202ENST00000254941 DPEP3Q9H4B8 488 aa10.02□□□□□ -0.8
NIP7-202ENST00000254941 PRDM10Q9NQV6 1147 aa10.02□□□□□ -0.8
NIP7-202ENST00000254941 CHORDC1Q9UHD1 332 aaPredicted RBP10.02□□□□□ -0.8
NIP7-202ENST00000254941 CYTH4Q9UIA0 394 aa10.02□□□□□ -0.8
NIP7-202ENST00000254941 SNX12Q9UMY4 172 aa10.02□□□□□ -0.8
NIP7-202ENST00000254941 TMEM189-UBE2V1I3L0A0 370 aa10.02□□□□□ -0.81
NIP7-202ENST00000254941 M0QYV0 167 aa10.02□□□□□ -0.81
NIP7-202ENST00000254941 M0QZQ0 153 aa10.02□□□□□ -0.81
NIP7-202ENST00000254941 KIAA0355O15063 1070 aa10.02□□□□□ -0.81
NIP7-202ENST00000254941 HCRTO43612 131 aa10.02□□□□□ -0.81
NIP7-202ENST00000254941 TIMP1P01033 207 aa10.02□□□□□ -0.81
NIP7-202ENST00000254941 CYP11A1P05108 521 aa10.02□□□□□ -0.81
NIP7-202ENST00000254941 ODC1P11926 461 aa10.02□□□□□ -0.81
NIP7-202ENST00000254941 RNASELQ05823 741 aaKnown RBP10.02□□□□□ -0.81
NIP7-202ENST00000254941 IKBKEQ14164 716 aa10.02□□□□□ -0.81
NIP7-202ENST00000254941 PKDCCQ504Y2 493 aa10.02□□□□□ -0.81
NIP7-202ENST00000254941 C11orf63Q6NUN7 778 aa10.02□□□□□ -0.81
NIP7-202ENST00000254941 UBE2Q1Q7Z7E8 422 aa10.02□□□□□ -0.81
NIP7-202ENST00000254941 NT5DC3Q86UY8 548 aa10.02□□□□□ -0.81
NIP7-202ENST00000254941 NPAS4Q8IUM7 802 aa10.02□□□□□ -0.81
NIP7-202ENST00000254941 B3GALNT2Q8NCR0 500 aa10.02□□□□□ -0.81
NIP7-202ENST00000254941 UBE2Q2Q8WVN8 375 aa10.02□□□□□ -0.81
NIP7-202ENST00000254941 SUSD3Q96L08 255 aa10.02□□□□□ -0.81
NIP7-202ENST00000254941 MCOLN1Q9GZU1 580 aa10.02□□□□□ -0.81
NIP7-202ENST00000254941 GOLPH3Q9H4A6 298 aa10.02□□□□□ -0.81
NIP7-202ENST00000254941 MRPL47Q9HD33 250 aaKnown RBP10.02□□□□□ -0.81
NIP7-202ENST00000254941 FAM49BQ9NUQ9 324 aa10.02□□□□□ -0.81
NIP7-202ENST00000254941 PARVAQ9NVD7 372 aa10.02□□□□□ -0.81
NIP7-202ENST00000254941 LRFN2Q9ULH4 789 aa10.02□□□□□ -0.81
NIP7-202ENST00000254941 STRIP2Q9ULQ0 834 aa10.02□□□□□ -0.81
NIP7-202ENST00000254941 NLRC5Q86WI3 1866 aa10.01□□□□□ -0.81
NIP7-202ENST00000254941 TCRBV5S1A1TA0A578 114 aa10.01□□□□□ -0.81
NIP7-202ENST00000254941 TRIM43BA6NCK2 446 aa10.01□□□□□ -0.81
NIP7-202ENST00000254941 KIF4AO95239 1232 aa10.01□□□□□ -0.81
NIP7-202ENST00000254941 ITGB1P05556 798 aa10.01□□□□□ -0.81
NIP7-202ENST00000254941 PFKMP08237 780 aa10.01□□□□□ -0.81
NIP7-202ENST00000254941 TCP1P17987 556 aaKnown RBP10.01□□□□□ -0.81
NIP7-202ENST00000254941 ITGB8P26012 769 aa10.01□□□□□ -0.81
NIP7-202ENST00000254941 GABRB2P47870 512 aa10.01□□□□□ -0.81
NIP7-202ENST00000254941 PDCLQ13371 301 aa10.01□□□□□ -0.81
NIP7-202ENST00000254941 MAMLD1Q13495 774 aa10.01□□□□□ -0.81
NIP7-202ENST00000254941 PTPN20Q4JDL3 420 aa10.01□□□□□ -0.81
NIP7-202ENST00000254941 PAN2Q504Q3 1202 aaKnown RBP10.01□□□□□ -0.81
NIP7-202ENST00000254941 MAMSTRQ6ZN01 415 aa10.01□□□□□ -0.81
NIP7-202ENST00000254941 PEX26Q7Z412 305 aa10.01□□□□□ -0.81
NIP7-202ENST00000254941 TTC30AQ86WT1 665 aa10.01□□□□□ -0.81
NIP7-202ENST00000254941 TRIM43Q96BQ3 446 aaPredicted RBP10.01□□□□□ -0.81
NIP7-202ENST00000254941 FAM193BQ96PV7 902 aaPredicted RBP10.01□□□□□ -0.81
NIP7-202ENST00000254941 CPXM1Q96SM3 734 aa10.01□□□□□ -0.81
NIP7-202ENST00000254941 OSBPL9Q96SU4 736 aa10.01□□□□□ -0.81
NIP7-202ENST00000254941 DDX43Q9NXZ2 648 aaKnown RBP10.01□□□□□ -0.81
NIP7-202ENST00000254941 DSEQ9UL01 958 aa10.01□□□□□ -0.81
NIP7-202ENST00000254941 HYOU1Q9Y4L1 999 aa10.01□□□□□ -0.81
NIP7-202ENST00000254941 SCINQ9Y6U3 715 aa10.01□□□□□ -0.81
NIP7-202ENST00000254941 PTPRSQ13332 1948 aa10□□□□□ -0.81
NIP7-202ENST00000254941 ARHGEF37A1IGU5 675 aa10□□□□□ -0.81
NIP7-202ENST00000254941 F8W810 466 aa10□□□□□ -0.81
NIP7-202ENST00000254941 I3L4J1 428 aa10□□□□□ -0.81
NIP7-202ENST00000254941 NCK2O43639 380 aa10□□□□□ -0.81
NIP7-202ENST00000254941 SRGAP2O75044 1071 aa10□□□□□ -0.81
NIP7-202ENST00000254941 SLU7O95391 586 aaKnown RBP10□□□□□ -0.81
NIP7-202ENST00000254941 SETSIPP0DME0 302 aa10□□□□□ -0.81
NIP7-202ENST00000254941 PTPN1P18031 435 aaKnown RBP10□□□□□ -0.81
NIP7-202ENST00000254941 GTF2F1P35269 517 aaKnown RBP eCLIP10□□□□□ -0.81
NIP7-202ENST00000254941 BRCC3P46736 316 aa10□□□□□ -0.81
NIP7-202ENST00000254941 GSCP56915 257 aaPredicted RBP10□□□□□ -0.81
NIP7-202ENST00000254941 RPS6KA1Q15418 735 aa10□□□□□ -0.81
NIP7-202ENST00000254941 WHAMMP3Q1A5X7 153 aa10□□□□□ -0.81
NIP7-202ENST00000254941 GOLGA7BQ2TAP0 167 aa10□□□□□ -0.81
NIP7-202ENST00000254941 LLGL2Q6P1M3 1020 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms