RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 TACO1Q9BSH4 297 aaKnown RBP17.84■□□□□ 0.45
ACTN4-201ENST00000252699 HSPA4LO95757 839 aa17.84■□□□□ 0.45
ACTN4-201ENST00000252699 EPHB2P29323 1055 aa17.84■□□□□ 0.45
ACTN4-201ENST00000252699 SNX17Q15036 470 aa17.84■□□□□ 0.45
ACTN4-201ENST00000252699 MEI1Q5TIA1 1274 aa17.84■□□□□ 0.45
ACTN4-201ENST00000252699 JADE1Q6IE81 842 aa17.84■□□□□ 0.45
ACTN4-201ENST00000252699 CHADLQ6NUI6 762 aa17.84■□□□□ 0.45
ACTN4-201ENST00000252699 SH2D3CQ8N5H7 860 aa17.84■□□□□ 0.45
ACTN4-201ENST00000252699 GPATCH11Q8N954 259 aa17.84■□□□□ 0.45
ACTN4-201ENST00000252699 PPP1R13LQ8WUF5 828 aa17.84■□□□□ 0.45
ACTN4-201ENST00000252699 RIN2Q8WYP3 895 aaPredicted RBP17.84■□□□□ 0.45
ACTN4-201ENST00000252699 DDX50Q9BQ39 737 aaKnown RBP17.84■□□□□ 0.45
ACTN4-201ENST00000252699 ZC3H7BQ9UGR2 993 aaKnown RBP17.84■□□□□ 0.45
ACTN4-201ENST00000252699 CASZ1Q86V15 1759 aa17.84■□□□□ 0.45
ACTN4-201ENST00000252699 LYPLA2O95372 231 aa17.84■□□□□ 0.45
ACTN4-201ENST00000252699 ADRB2P07550 413 aa17.84■□□□□ 0.45
ACTN4-201ENST00000252699 TYK2P29597 1187 aa17.84■□□□□ 0.45
ACTN4-201ENST00000252699 MAP2K5Q13163 448 aa17.84■□□□□ 0.45
ACTN4-201ENST00000252699 CAPSQ13938 189 aa17.84■□□□□ 0.45
ACTN4-201ENST00000252699 MAP3K21Q5TCX8 1036 aa17.84■□□□□ 0.45
ACTN4-201ENST00000252699 CXCL17Q6UXB2 119 aa17.84■□□□□ 0.45
ACTN4-201ENST00000252699 PLPPR4Q7Z2D5 763 aa17.84■□□□□ 0.45
ACTN4-201ENST00000252699 SLC9A9Q8IVB4 645 aa17.84■□□□□ 0.45
ACTN4-201ENST00000252699 MCOLN2Q8IZK6 566 aa17.84■□□□□ 0.45
ACTN4-201ENST00000252699 FAM71DQ8N9W8 422 aa17.84■□□□□ 0.45
ACTN4-201ENST00000252699 CDH16O75309 829 aa17.83■□□□□ 0.45
ACTN4-201ENST00000252699 CCNE2O96020 404 aa17.83■□□□□ 0.45
ACTN4-201ENST00000252699 C1QBPQ07021 282 aaKnown RBP17.83■□□□□ 0.45
ACTN4-201ENST00000252699 OR2W6PQ8NHA6 318 aa17.83■□□□□ 0.45
ACTN4-201ENST00000252699 TRIM55Q9BYV6 548 aa17.83■□□□□ 0.45
ACTN4-201ENST00000252699 FOXP3Q9BZS1 431 aa17.83■□□□□ 0.45
ACTN4-201ENST00000252699 KCTD10Q9H3F6 313 aa17.83■□□□□ 0.45
ACTN4-201ENST00000252699 SETD1AO15047 1707 aaKnown RBP17.83■□□□□ 0.45
ACTN4-201ENST00000252699 A0A0G2JND7 137 aa17.83■□□□□ 0.45
ACTN4-201ENST00000252699 WDR75Q8IWA0 830 aaKnown RBP17.83■□□□□ 0.45
ACTN4-201ENST00000252699 SHCBP1Q8NEM2 672 aa17.83■□□□□ 0.45
ACTN4-201ENST00000252699 CNPY3Q9BT09 278 aa17.83■□□□□ 0.45
ACTN4-201ENST00000252699 GOLGA8QA0A0J9YX86 632 aa17.83■□□□□ 0.44
ACTN4-201ENST00000252699 GOLGA8OA6NCC3 632 aa17.83■□□□□ 0.44
ACTN4-201ENST00000252699 GOLGA8NF8WBI6 632 aa17.83■□□□□ 0.44
ACTN4-201ENST00000252699 POMCP01189 267 aa17.83■□□□□ 0.44
ACTN4-201ENST00000252699 GANCQ8TET4 914 aa17.83■□□□□ 0.44
ACTN4-201ENST00000252699 PNKPQ96T60 521 aa17.83■□□□□ 0.44
ACTN4-201ENST00000252699 LMCD1Q9NZU5 365 aa17.83■□□□□ 0.44
ACTN4-201ENST00000252699 NRCAMQ92823 1304 aa17.83■□□□□ 0.44
ACTN4-201ENST00000252699 GMNCA6NCL1 334 aa17.83■□□□□ 0.44
ACTN4-201ENST00000252699 EPHB6O15197 1021 aa17.83■□□□□ 0.44
ACTN4-201ENST00000252699 SPAG7O75391 227 aa17.83■□□□□ 0.44
ACTN4-201ENST00000252699 TAC1P20366 129 aa17.83■□□□□ 0.44
ACTN4-201ENST00000252699 SEPT8Q92599 483 aa17.83■□□□□ 0.44
ACTN4-201ENST00000252699 TIMM13Q9Y5L4 95 aaPredicted RBP17.83■□□□□ 0.44
ACTN4-201ENST00000252699 COL1A1P02452 1464 aaPredicted RBP17.82■□□□□ 0.44
ACTN4-201ENST00000252699 C10orf120Q5SQS8 335 aa17.82■□□□□ 0.44
ACTN4-201ENST00000252699 NOP9Q86U38 636 aaKnown RBP17.82■□□□□ 0.44
ACTN4-201ENST00000252699 FAM172AQ8WUF8 416 aa17.82■□□□□ 0.44
ACTN4-201ENST00000252699 RRP15Q9Y3B9 282 aaKnown RBP17.82■□□□□ 0.44
ACTN4-201ENST00000252699 ZC3H4Q9UPT8 1303 aaKnown RBP17.82■□□□□ 0.44
ACTN4-201ENST00000252699 PEX10O60683 326 aa17.82■□□□□ 0.44
ACTN4-201ENST00000252699 CALRP27797 417 aaKnown RBP17.82■□□□□ 0.44
ACTN4-201ENST00000252699 AXLP30530 894 aa17.82■□□□□ 0.44
ACTN4-201ENST00000252699 LHX1P48742 406 aa17.82■□□□□ 0.44
ACTN4-201ENST00000252699 MAP7Q14244 749 aa17.82■□□□□ 0.44
ACTN4-201ENST00000252699 ZNF710Q8N1W2 664 aa17.82■□□□□ 0.44
ACTN4-201ENST00000252699 RXFP2Q8WXD0 754 aa17.82■□□□□ 0.44
ACTN4-201ENST00000252699 PDGFCQ9NRA1 345 aa17.82■□□□□ 0.44
ACTN4-201ENST00000252699 COL20A1Q9P218 1284 aa17.82■□□□□ 0.44
ACTN4-201ENST00000252699 LSM7Q9UK45 103 aaKnown RBP17.82■□□□□ 0.44
ACTN4-201ENST00000252699 TGFB1I1O43294 461 aa17.82■□□□□ 0.44
ACTN4-201ENST00000252699 RASSF3Q86WH2 238 aa17.82■□□□□ 0.44
ACTN4-201ENST00000252699 CEP120Q8N960 986 aa17.82■□□□□ 0.44
ACTN4-201ENST00000252699 VCXQ9H320 206 aa17.82■□□□□ 0.44
ACTN4-201ENST00000252699 TSPAN16Q9UKR8 245 aa17.82■□□□□ 0.44
ACTN4-201ENST00000252699 CHMP2BQ9UQN3 213 aa17.82■□□□□ 0.44
ACTN4-201ENST00000252699 ATRNL1Q5VV63 1379 aa17.82■□□□□ 0.44
ACTN4-201ENST00000252699 CLGNO14967 610 aa17.82■□□□□ 0.44
ACTN4-201ENST00000252699 MAP3K6O95382 1288 aa17.82■□□□□ 0.44
ACTN4-201ENST00000252699 BAG2O95816 211 aa17.82■□□□□ 0.44
ACTN4-201ENST00000252699 NCF2P19878 526 aaPredicted RBP17.82■□□□□ 0.44
ACTN4-201ENST00000252699 POU5F1BQ06416 359 aa17.82■□□□□ 0.44
ACTN4-201ENST00000252699 RAD51Q06609 339 aa17.82■□□□□ 0.44
ACTN4-201ENST00000252699 KCNMA1Q12791 1236 aa17.82■□□□□ 0.44
ACTN4-201ENST00000252699 LONRF1Q17RB8 773 aa17.82■□□□□ 0.44
ACTN4-201ENST00000252699 HSDL1Q3SXM5 330 aa17.82■□□□□ 0.44
ACTN4-201ENST00000252699 BEND6Q5SZJ8 279 aaPredicted RBP17.82■□□□□ 0.44
ACTN4-201ENST00000252699 CHSY1Q86X52 802 aa17.82■□□□□ 0.44
ACTN4-201ENST00000252699 KIAA0319LQ8IZA0 1049 aa17.82■□□□□ 0.44
ACTN4-201ENST00000252699 STKLD1Q8NE28 680 aa17.82■□□□□ 0.44
ACTN4-201ENST00000252699 ACTRT1Q8TDG2 376 aa17.82■□□□□ 0.44
ACTN4-201ENST00000252699 PPP1R12CQ9BZL4 782 aa17.82■□□□□ 0.44
ACTN4-201ENST00000252699 TRPV6Q9H1D0 765 aa17.82■□□□□ 0.44
ACTN4-201ENST00000252699 WDCPQ9H6R7 721 aa17.82■□□□□ 0.44
ACTN4-201ENST00000252699 MAPK13O15264 365 aa17.81■□□□□ 0.44
ACTN4-201ENST00000252699 EIF4BP23588 611 aaKnown RBP17.81■□□□□ 0.44
ACTN4-201ENST00000252699 MAGEA4P43358 317 aa17.81■□□□□ 0.44
ACTN4-201ENST00000252699 CLK2P49760 499 aaKnown RBP17.81■□□□□ 0.44
ACTN4-201ENST00000252699 COPS2P61201 443 aa17.81■□□□□ 0.44
ACTN4-201ENST00000252699 BMT2Q1RMZ1 405 aa17.81■□□□□ 0.44
ACTN4-201ENST00000252699 TRIM67Q6ZTA4 783 aa17.81■□□□□ 0.44
ACTN4-201ENST00000252699 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.81■□□□□ 0.441e-8■□□□□ 11.3
ACTN4-201ENST00000252699 ASIC4Q96FT7 647 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms