RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 LRRC8CQ8TDW0 803 aa19.95■□□□□ 0.78
SNX4-201ENST00000251775 RBM15Q96T37 977 aaKnown RBP eCLIP19.95■□□□□ 0.78
SNX4-201ENST00000251775 MIPEPQ99797 713 aa19.95■□□□□ 0.78
SNX4-201ENST00000251775 FAM118BQ9BPY3 351 aa19.95■□□□□ 0.78
SNX4-201ENST00000251775 PPP1R1BQ9UD71 204 aaPredicted RBP19.95■□□□□ 0.78
SNX4-201ENST00000251775 PCDHB2Q9Y5E7 798 aa19.95■□□□□ 0.78
SNX4-201ENST00000251775 MAFBQ9Y5Q3 323 aaPredicted RBP19.95■□□□□ 0.78
SNX4-201ENST00000251775 FZD9O00144 591 aa19.95■□□□□ 0.78
SNX4-201ENST00000251775 FGFR1P11362 822 aa19.95■□□□□ 0.78
SNX4-201ENST00000251775 MARK3P27448 753 aa19.95■□□□□ 0.78
SNX4-201ENST00000251775 RFC5P40937 340 aa19.95■□□□□ 0.78
SNX4-201ENST00000251775 SLC1A5Q15758 541 aa19.95■□□□□ 0.78
SNX4-201ENST00000251775 PKN2Q16513 984 aaKnown RBP19.95■□□□□ 0.78
SNX4-201ENST00000251775 C4orf50Q6ZRC1 276 aa19.95■□□□□ 0.78
SNX4-201ENST00000251775 KLRG1Q96E93 195 aa19.95■□□□□ 0.78
SNX4-201ENST00000251775 ZNF302Q9NR11 478 aa19.95■□□□□ 0.78
SNX4-201ENST00000251775 DLGAP2Q9P1A6 1054 aa19.95■□□□□ 0.78
SNX4-201ENST00000251775 CPSF2Q9P2I0 782 aaKnown RBP19.95■□□□□ 0.78
SNX4-201ENST00000251775 LNPEPQ9UIQ6 1025 aa19.95■□□□□ 0.78
SNX4-201ENST00000251775 C2CD2Q9Y426 696 aa19.95■□□□□ 0.78
SNX4-201ENST00000251775 LOC285556D6RIA3 1793 aa19.94■□□□□ 0.78
SNX4-201ENST00000251775 NVLO15381 856 aaKnown RBP19.94■□□□□ 0.78
SNX4-201ENST00000251775 PEX10O60683 326 aa19.94■□□□□ 0.78
SNX4-201ENST00000251775 LMNAP02545 664 aaKnown RBP19.94■□□□□ 0.78
SNX4-201ENST00000251775 CFHP08603 1231 aa19.94■□□□□ 0.78
SNX4-201ENST00000251775 PIK3CAP42336 1068 aa19.94■□□□□ 0.78
SNX4-201ENST00000251775 CNTN2Q02246 1040 aa19.94■□□□□ 0.78
SNX4-201ENST00000251775 KLF1Q13351 362 aaPredicted RBP19.94■□□□□ 0.78
SNX4-201ENST00000251775 CTC1Q2NKJ3 1217 aa19.94■□□□□ 0.78
SNX4-201ENST00000251775 SLC45A4Q5BKX6 768 aa19.94■□□□□ 0.78
SNX4-201ENST00000251775 WDR44Q5JSH3 913 aa19.94■□□□□ 0.78
SNX4-201ENST00000251775 OTOAQ7RTW8 1153 aa19.94■□□□□ 0.78
SNX4-201ENST00000251775 APBB1IPQ7Z5R6 666 aaPredicted RBP19.94■□□□□ 0.78
SNX4-201ENST00000251775 C4orf33Q8N1A6 199 aa19.94■□□□□ 0.78
SNX4-201ENST00000251775 GALNT15Q8N3T1 639 aa19.94■□□□□ 0.78
SNX4-201ENST00000251775 BBOF1Q8ND07 529 aa19.94■□□□□ 0.78
SNX4-201ENST00000251775 UCMAQ8WVF2 138 aa19.94■□□□□ 0.78
SNX4-201ENST00000251775 PORCNQ9H237 461 aa19.94■□□□□ 0.78
SNX4-201ENST00000251775 DHX33Q9H6R0 707 aaKnown RBP19.94■□□□□ 0.78
SNX4-201ENST00000251775 AVENQ9NQS1 362 aaPredicted RBP19.94■□□□□ 0.78
SNX4-201ENST00000251775 ATG7O95352 703 aa19.94■□□□□ 0.78
SNX4-201ENST00000251775 OATP04181 439 aa19.94■□□□□ 0.78
SNX4-201ENST00000251775 CYP1A1P04798 512 aaPredicted RBP19.94■□□□□ 0.78
SNX4-201ENST00000251775 EDN1P05305 212 aa19.94■□□□□ 0.78
SNX4-201ENST00000251775 ACO1P21399 889 aaKnown RBP19.94■□□□□ 0.78
SNX4-201ENST00000251775 CENPCQ03188 943 aa19.94■□□□□ 0.78
SNX4-201ENST00000251775 OR52E8Q6IFG1 317 aa19.94■□□□□ 0.78
SNX4-201ENST00000251775 IRGCQ6NXR0 463 aa19.94■□□□□ 0.78
SNX4-201ENST00000251775 ZNF365Q70YC5 407 aa19.94■□□□□ 0.78
SNX4-201ENST00000251775 NLRP9Q7RTR0 991 aa19.94■□□□□ 0.78
SNX4-201ENST00000251775 CCDC89Q8N998 374 aa19.94■□□□□ 0.78
SNX4-201ENST00000251775 DDX27Q96GQ7 796 aaKnown RBP19.94■□□□□ 0.78
SNX4-201ENST00000251775 FAM81BQ96LP2 452 aa19.94■□□□□ 0.78
SNX4-201ENST00000251775 HEMGNQ9BXL5 484 aa19.94■□□□□ 0.78
SNX4-201ENST00000251775 APOBEC3GQ9HC16 384 aaKnown RBP19.94■□□□□ 0.78
SNX4-201ENST00000251775 ZFP69BQ9UJL9 534 aa19.94■□□□□ 0.78
SNX4-201ENST00000251775 LRRIQ4A6NIV6 560 aa19.93■□□□□ 0.78
SNX4-201ENST00000251775 RALAP11233 206 aa19.93■□□□□ 0.78
SNX4-201ENST00000251775 DAB2IPQ5VWQ8 1189 aa19.93■□□□□ 0.78
SNX4-201ENST00000251775 ZNF677Q86XU0 584 aa19.93■□□□□ 0.78
SNX4-201ENST00000251775 TDRPQ86YL5 185 aa19.93■□□□□ 0.78
SNX4-201ENST00000251775 ZCCHC9Q8N567 271 aaKnown RBP19.93■□□□□ 0.78
SNX4-201ENST00000251775 TRPM4Q8TD43 1214 aa19.93■□□□□ 0.78
SNX4-201ENST00000251775 CFAP57Q96MR6 1250 aa19.93■□□□□ 0.78
SNX4-201ENST00000251775 TARS2Q9BW92 718 aaKnown RBP19.93■□□□□ 0.78
SNX4-201ENST00000251775 STOML1Q9UBI4 398 aa19.93■□□□□ 0.78
SNX4-201ENST00000251775 SMG5Q9UPR3 1016 aaKnown RBP19.93■□□□□ 0.78
SNX4-201ENST00000251775 POC1B-GALNT4F8VUJ3 575 aa19.93■□□□□ 0.78
SNX4-201ENST00000251775 C2CD2LO14523 706 aa19.93■□□□□ 0.78
SNX4-201ENST00000251775 ARL2P36404 184 aa19.93■□□□□ 0.78
SNX4-201ENST00000251775 VHLP40337 213 aa19.93■□□□□ 0.78
SNX4-201ENST00000251775 SESN3P58005 492 aa19.93■□□□□ 0.78
SNX4-201ENST00000251775 STXBP2Q15833 593 aa19.93■□□□□ 0.78
SNX4-201ENST00000251775 RNF220Q5VTB9 566 aa19.93■□□□□ 0.78
SNX4-201ENST00000251775 IFT43Q96FT9 208 aa19.93■□□□□ 0.78
SNX4-201ENST00000251775 CADM1Q9BY67 442 aaKnown RBP19.93■□□□□ 0.78
SNX4-201ENST00000251775 HOXC10Q9NYD6 342 aa19.93■□□□□ 0.78
SNX4-201ENST00000251775 WDR90Q96KV7 1748 aa19.92■□□□□ 0.78
SNX4-201ENST00000251775 K7ERI5 159 aa19.92■□□□□ 0.78
SNX4-201ENST00000251775 KLRC2P26717 231 aa19.92■□□□□ 0.78
SNX4-201ENST00000251775 SSTR3P32745 418 aaPredicted RBP19.92■□□□□ 0.78
SNX4-201ENST00000251775 ICAM3P32942 547 aa19.92■□□□□ 0.78
SNX4-201ENST00000251775 ABCD1P33897 745 aa19.92■□□□□ 0.78
SNX4-201ENST00000251775 NAMPTP43490 491 aa19.92■□□□□ 0.78
SNX4-201ENST00000251775 PLEKHG4Q58EX7 1191 aa19.92■□□□□ 0.78
SNX4-201ENST00000251775 SCARA3Q6AZY7 606 aa19.92■□□□□ 0.78
SNX4-201ENST00000251775 DSTYKQ6XUX3 929 aa19.92■□□□□ 0.78
SNX4-201ENST00000251775 CLNKQ7Z7G1 428 aa19.92■□□□□ 0.78
SNX4-201ENST00000251775 MTDHQ86UE4 582 aaKnown RBP19.92■□□□□ 0.78
SNX4-201ENST00000251775 DEPTORQ8TB45 409 aa19.92■□□□□ 0.78
SNX4-201ENST00000251775 NRG4Q8WWG1 115 aa19.92■□□□□ 0.78
SNX4-201ENST00000251775 SMC6Q96SB8 1091 aa19.92■□□□□ 0.78
SNX4-201ENST00000251775 SAYSD1Q9NPB0 183 aa19.92■□□□□ 0.78
SNX4-201ENST00000251775 SAR1AQ9NR31 198 aa19.92■□□□□ 0.78
SNX4-201ENST00000251775 RBAKQ9NYW8 714 aaPredicted RBP19.92■□□□□ 0.78
SNX4-201ENST00000251775 AFG3L2Q9Y4W6 797 aa19.92■□□□□ 0.78
SNX4-201ENST00000251775 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.92■□□□□ 0.78
SNX4-201ENST00000251775 SSC5DA1L4H1 1573 aa19.92■□□□□ 0.78
SNX4-201ENST00000251775 PIGRP01833 764 aa19.92■□□□□ 0.78
SNX4-201ENST00000251775 KRT15P19012 456 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms