RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 PYROXD1Q8WU10 500 aa19.18■□□□□ 0.66
PTPN12-201ENST00000248594 OXCT2Q9BYC2 517 aaPredicted RBP19.18■□□□□ 0.66
PTPN12-201ENST00000248594 S100A14Q9HCY8 104 aa19.18■□□□□ 0.66
PTPN12-201ENST00000248594 NENFQ9UMX5 172 aa19.18■□□□□ 0.66
PTPN12-201ENST00000248594 NDC80O14777 642 aa19.18■□□□□ 0.66
PTPN12-201ENST00000248594 ATP2A1O14983 1001 aa19.18■□□□□ 0.66
PTPN12-201ENST00000248594 COL6A2P12110 1019 aa19.18■□□□□ 0.66
PTPN12-201ENST00000248594 ATP13A4Q4VNC1 1196 aa19.18■□□□□ 0.66
PTPN12-201ENST00000248594 EFHC1Q5JVL4 640 aa19.18■□□□□ 0.66
PTPN12-201ENST00000248594 C11orf63Q6NUN7 778 aa19.18■□□□□ 0.66
PTPN12-201ENST00000248594 RNF148Q8N7C7 305 aa19.18■□□□□ 0.66
PTPN12-201ENST00000248594 UNC45AQ9H3U1 944 aa19.18■□□□□ 0.66
PTPN12-201ENST00000248594 IFT122Q9HBG6 1241 aa19.18■□□□□ 0.66
PTPN12-201ENST00000248594 EMSYQ7Z589 1322 aa19.18■□□□□ 0.66
PTPN12-201ENST00000248594 TMEM221A6NGB7 291 aa19.18■□□□□ 0.66
PTPN12-201ENST00000248594 SGK1O00141 431 aa19.18■□□□□ 0.66
PTPN12-201ENST00000248594 PROCP04070 461 aa19.18■□□□□ 0.66
PTPN12-201ENST00000248594 TFAP2AP05549 437 aa19.18■□□□□ 0.66
PTPN12-201ENST00000248594 PTK6Q13882 451 aa19.18■□□□□ 0.66
PTPN12-201ENST00000248594 ANKRD20A4Q4UJ75 823 aa19.18■□□□□ 0.66
PTPN12-201ENST00000248594 C3orf62Q6ZUJ4 267 aa19.18■□□□□ 0.66
PTPN12-201ENST00000248594 APOL6Q9BWW8 343 aa19.18■□□□□ 0.66
PTPN12-201ENST00000248594 PDXKO00764 312 aa19.17■□□□□ 0.66
PTPN12-201ENST00000248594 TM7SF2O76062 418 aa19.17■□□□□ 0.66
PTPN12-201ENST00000248594 CAMTA2O94983 1202 aa19.17■□□□□ 0.66
PTPN12-201ENST00000248594 SRGAP2CP0DJJ0 459 aa19.17■□□□□ 0.66
PTPN12-201ENST00000248594 SRGAP2BP0DMP2 458 aa19.17■□□□□ 0.66
PTPN12-201ENST00000248594 OXCT1P55809 520 aa19.17■□□□□ 0.66
PTPN12-201ENST00000248594 ITPK1Q13572 414 aa19.17■□□□□ 0.66
PTPN12-201ENST00000248594 OASLQ15646 514 aaKnown RBP19.17■□□□□ 0.66
PTPN12-201ENST00000248594 TTBK2Q6IQ55 1244 aa19.17■□□□□ 0.66
PTPN12-201ENST00000248594 NET1Q7Z628 596 aaPredicted RBP19.17■□□□□ 0.66
PTPN12-201ENST00000248594 NOP9Q86U38 636 aaKnown RBP19.17■□□□□ 0.66
PTPN12-201ENST00000248594 CATSPER3Q86XQ3 398 aa19.17■□□□□ 0.66
PTPN12-201ENST00000248594 TPH2Q8IWU9 490 aa19.17■□□□□ 0.66
PTPN12-201ENST00000248594 FRMPD4Q14CM0 1322 aa19.17■□□□□ 0.66
PTPN12-201ENST00000248594 TLR1Q15399 786 aa19.17■□□□□ 0.66
PTPN12-201ENST00000248594 C6orf52Q5T4I8 152 aa19.17■□□□□ 0.66
PTPN12-201ENST00000248594 RHPN2Q8IUC4 686 aa19.17■□□□□ 0.66
PTPN12-201ENST00000248594 LZICQ8WZA0 190 aa19.17■□□□□ 0.66
PTPN12-201ENST00000248594 TEKT1Q969V4 418 aa19.17■□□□□ 0.66
PTPN12-201ENST00000248594 CEP95Q96GE4 821 aa19.17■□□□□ 0.66
PTPN12-201ENST00000248594 PAFAH2Q99487 392 aa19.17■□□□□ 0.66
PTPN12-201ENST00000248594 ACTL7BQ9Y614 415 aa19.17■□□□□ 0.66
PTPN12-201ENST00000248594 DDX60Q8IY21 1712 aaKnown RBP19.17■□□□□ 0.66
PTPN12-201ENST00000248594 GTF2H1P32780 548 aa19.16■□□□□ 0.66
PTPN12-201ENST00000248594 HSPA1LP34931 641 aa19.16■□□□□ 0.66
PTPN12-201ENST00000248594 MAPK10P53779 464 aa19.16■□□□□ 0.66
PTPN12-201ENST00000248594 GEMIN4P57678 1058 aaKnown RBP19.16■□□□□ 0.66
PTPN12-201ENST00000248594 HPS6Q86YV9 775 aa19.16■□□□□ 0.66
PTPN12-201ENST00000248594 PASD1Q8IV76 773 aa19.16■□□□□ 0.66
PTPN12-201ENST00000248594 CPA5Q8WXQ8 436 aa19.16■□□□□ 0.66
PTPN12-201ENST00000248594 PAIP1Q9H074 479 aaKnown RBP19.16■□□□□ 0.66
PTPN12-201ENST00000248594 CCDC88AQ3V6T2 1871 aa19.16■□□□□ 0.66
PTPN12-201ENST00000248594 KDM3AQ9Y4C1 1321 aa19.16■□□□□ 0.66
PTPN12-201ENST00000248594 PRPF4O43172 522 aaKnown RBP eCLIP19.16■□□□□ 0.662e-8■■■■□ 26.6
PTPN12-201ENST00000248594 NCF2P19878 526 aaPredicted RBP19.16■□□□□ 0.66
PTPN12-201ENST00000248594 SLC5A2P31639 672 aa19.16■□□□□ 0.66
PTPN12-201ENST00000248594 TBL3Q12788 808 aaKnown RBP19.16■□□□□ 0.66
PTPN12-201ENST00000248594 DHX38Q92620 1227 aaKnown RBP19.16■□□□□ 0.66
PTPN12-201ENST00000248594 TMIGD2Q96BF3 282 aa19.16■□□□□ 0.66
PTPN12-201ENST00000248594 FAM81BQ96LP2 452 aa19.16■□□□□ 0.66
PTPN12-201ENST00000248594 SENP7Q9BQF6 1050 aa19.16■□□□□ 0.66
PTPN12-201ENST00000248594 SH2D3AQ9BRG2 576 aa19.16■□□□□ 0.66
PTPN12-201ENST00000248594 TCHPQ9BT92 498 aa19.16■□□□□ 0.66
PTPN12-201ENST00000248594 CIDEBQ9UHD4 219 aa19.16■□□□□ 0.66
PTPN12-201ENST00000248594 ARHGAP10A1A4S6 786 aa19.16■□□□□ 0.66
PTPN12-201ENST00000248594 HIBADHP31937 336 aaKnown RBP19.16■□□□□ 0.66
PTPN12-201ENST00000248594 HALP42357 657 aa19.16■□□□□ 0.66
PTPN12-201ENST00000248594 PSMD6Q15008 389 aa19.16■□□□□ 0.66
PTPN12-201ENST00000248594 ZNF34Q8IZ26 560 aa19.16■□□□□ 0.66
PTPN12-201ENST00000248594 CERKQ8TCT0 537 aa19.16■□□□□ 0.66
PTPN12-201ENST00000248594 FAM172AQ8WUF8 416 aa19.16■□□□□ 0.66
PTPN12-201ENST00000248594 SKA1Q96BD8 255 aa19.16■□□□□ 0.66
PTPN12-201ENST00000248594 TMEM247A6NEH6 219 aa19.15■□□□□ 0.66
PTPN12-201ENST00000248594 CYB561D2O14569 222 aa19.15■□□□□ 0.66
PTPN12-201ENST00000248594 CYP1B1Q16678 543 aa19.15■□□□□ 0.66
PTPN12-201ENST00000248594 EBF4Q9BQW3 602 aa19.15■□□□□ 0.66
PTPN12-201ENST00000248594 TRIM56Q9BRZ2 755 aaKnown RBP19.15■□□□□ 0.66
PTPN12-201ENST00000248594 GPR88Q9GZN0 384 aa19.15■□□□□ 0.66
PTPN12-201ENST00000248594 KCNK13Q9HB14 408 aa19.15■□□□□ 0.66
PTPN12-201ENST00000248594 WDR37Q9Y2I8 494 aa19.15■□□□□ 0.66
PTPN12-201ENST00000248594 BUD23O43709 281 aaKnown RBP19.15■□□□□ 0.66
PTPN12-201ENST00000248594 TYROBPO43914 113 aa19.15■□□□□ 0.66
PTPN12-201ENST00000248594 SORBS3O60504 671 aa19.15■□□□□ 0.66
PTPN12-201ENST00000248594 PCP11498 1178 aaKnown RBP19.15■□□□□ 0.66
PTPN12-201ENST00000248594 RNF111Q6ZNA4 994 aa19.15■□□□□ 0.66
PTPN12-201ENST00000248594 RAVER1Q8IY67 606 aaKnown RBP19.15■□□□□ 0.66
PTPN12-201ENST00000248594 PRICKLE1Q96MT3 831 aaPredicted RBP19.15■□□□□ 0.66
PTPN12-201ENST00000248594 COL16A1Q07092 1604 aaPredicted RBP19.15■□□□□ 0.66
PTPN12-201ENST00000248594 PIK3R2O00459 728 aa19.15■□□□□ 0.66
PTPN12-201ENST00000248594 CFLARO15519 480 aa19.15■□□□□ 0.66
PTPN12-201ENST00000248594 TOM1L1O75674 476 aa19.15■□□□□ 0.66
PTPN12-201ENST00000248594 DMPKQ09013 629 aa19.15■□□□□ 0.66
PTPN12-201ENST00000248594 BTG3Q14201 252 aaPredicted RBP19.15■□□□□ 0.66
PTPN12-201ENST00000248594 IFNLR1Q8IU57 520 aaPredicted RBP19.15■□□□□ 0.66
PTPN12-201ENST00000248594 SLC7A5P1Q8MH63 180 aa19.15■□□□□ 0.66
PTPN12-201ENST00000248594 PPP4R1Q8TF05 950 aa19.15■□□□□ 0.66
PTPN12-201ENST00000248594 CAAP1Q9H8G2 361 aa19.15■□□□□ 0.66
PTPN12-201ENST00000248594 PSTPIP2Q9H939 334 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms