RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 PPM1LQ5SGD2 360 aa12.08□□□□□ -0.48
SF3B6-201ENST00000233468 ADGRF2Q8IZF7 708 aa12.08□□□□□ -0.48
SF3B6-201ENST00000233468 ELMOD1Q8N336 334 aa12.08□□□□□ -0.48
SF3B6-201ENST00000233468 PDCL2Q8N4E4 241 aa12.08□□□□□ -0.48
SF3B6-201ENST00000233468 TTC39CQ8N584 583 aa12.08□□□□□ -0.48
SF3B6-201ENST00000233468 C12orf76Q8N812 135 aaPredicted RBP12.08□□□□□ -0.48
SF3B6-201ENST00000233468 PLEKHO2Q8TD55 490 aa12.08□□□□□ -0.48
SF3B6-201ENST00000233468 EEF2KMTQ96G04 330 aa12.08□□□□□ -0.48
SF3B6-201ENST00000233468 FAXDC2Q96IV6 333 aa12.08□□□□□ -0.48
SF3B6-201ENST00000233468 DUSP9Q99956 384 aaKnown RBP12.08□□□□□ -0.48
SF3B6-201ENST00000233468 ACBD6Q9BR61 282 aa12.08□□□□□ -0.48
SF3B6-201ENST00000233468 NAT10Q9H0A0 1025 aaKnown RBP12.08□□□□□ -0.48
SF3B6-201ENST00000233468 GZF1Q9H116 711 aaPredicted RBP12.08□□□□□ -0.48
SF3B6-201ENST00000233468 SNX25Q9H3E2 840 aa12.08□□□□□ -0.48
SF3B6-201ENST00000233468 PIDD1Q9HB75 910 aa12.08□□□□□ -0.48
SF3B6-201ENST00000233468 HSFX1Q9UBD0 423 aa12.08□□□□□ -0.48
SF3B6-201ENST00000233468 MAGEC2Q9UBF1 373 aaPredicted RBP12.08□□□□□ -0.48
SF3B6-201ENST00000233468 CCDC195A0A1B0GUA6 201 aa12.07□□□□□ -0.48
SF3B6-201ENST00000233468 P4HA2O15460 535 aa12.07□□□□□ -0.48
SF3B6-201ENST00000233468 ZMYND10O75800 440 aa12.07□□□□□ -0.48
SF3B6-201ENST00000233468 LRG1P02750 347 aa12.07□□□□□ -0.48
SF3B6-201ENST00000233468 C8AP07357 584 aa12.07□□□□□ -0.48
SF3B6-201ENST00000233468 POU2F2P09086 479 aa12.07□□□□□ -0.48
SF3B6-201ENST00000233468 TRIM49P0CI25 452 aa12.07□□□□□ -0.48
SF3B6-201ENST00000233468 TRIM49CP0CI26 452 aa12.07□□□□□ -0.48
SF3B6-201ENST00000233468 MARSP56192 900 aaKnown RBP12.07□□□□□ -0.48
SF3B6-201ENST00000233468 MYL6P60660 151 aa12.07□□□□□ -0.48
SF3B6-201ENST00000233468 STX1AQ16623 288 aa12.07□□□□□ -0.48
SF3B6-201ENST00000233468 PTPN21Q16825 1174 aa12.07□□□□□ -0.48
SF3B6-201ENST00000233468 RARS2Q5T160 578 aaKnown RBP12.07□□□□□ -0.48
SF3B6-201ENST00000233468 GPR149Q86SP6 731 aa12.07□□□□□ -0.48
SF3B6-201ENST00000233468 SUGP1Q8IWZ8 645 aaKnown RBP12.07□□□□□ -0.48
SF3B6-201ENST00000233468 TCEAL8Q8IYN2 117 aa12.07□□□□□ -0.48
SF3B6-201ENST00000233468 FBXL13Q8NEE6 735 aa12.07□□□□□ -0.48
SF3B6-201ENST00000233468 POMKQ9H5K3 350 aa12.07□□□□□ -0.48
SF3B6-201ENST00000233468 THAP9Q9H5L6 903 aa12.07□□□□□ -0.48
SF3B6-201ENST00000233468 FAM124BQ9H5Z6 455 aaPredicted RBP12.07□□□□□ -0.48
SF3B6-201ENST00000233468 MMRN2Q9H8L6 949 aa12.07□□□□□ -0.48
SF3B6-201ENST00000233468 CYP4F11Q9HBI6 524 aa12.07□□□□□ -0.48
SF3B6-201ENST00000233468 DDX43Q9NXZ2 648 aaKnown RBP12.07□□□□□ -0.48
SF3B6-201ENST00000233468 NXF1Q9UBU9 619 aaKnown RBP12.07□□□□□ -0.48
SF3B6-201ENST00000233468 L1RE1Q9UN81 338 aa12.07□□□□□ -0.48
SF3B6-201ENST00000233468 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.07□□□□□ -0.48
SF3B6-201ENST00000233468 WDR27A2RRH5 827 aa12.06□□□□□ -0.48
SF3B6-201ENST00000233468 C2CD4DB7Z1M9 353 aa12.06□□□□□ -0.48
SF3B6-201ENST00000233468 PMM2O15305 246 aa12.06□□□□□ -0.48
SF3B6-201ENST00000233468 ADAM12O43184 909 aa12.06□□□□□ -0.48
SF3B6-201ENST00000233468 HLA-DRAP01903 254 aa12.06□□□□□ -0.48
SF3B6-201ENST00000233468 SPATA31D3P0C874 917 aa12.06□□□□□ -0.48
SF3B6-201ENST00000233468 WARSP23381 471 aaKnown RBP12.06□□□□□ -0.48
SF3B6-201ENST00000233468 AVPR2P30518 371 aa12.06□□□□□ -0.48
SF3B6-201ENST00000233468 GNL1P36915 607 aaPredicted RBP12.06□□□□□ -0.48
SF3B6-201ENST00000233468 ALDH1A3P47895 512 aa12.06□□□□□ -0.48
SF3B6-201ENST00000233468 TUFMP49411 452 aaKnown RBP12.06□□□□□ -0.48
SF3B6-201ENST00000233468 PTPN5P54829 565 aa12.06□□□□□ -0.48
SF3B6-201ENST00000233468 PPP3CAQ08209 521 aa12.06□□□□□ -0.48
SF3B6-201ENST00000233468 ADCY1Q08828 1119 aa12.06□□□□□ -0.48
SF3B6-201ENST00000233468 SOWAHAQ2M3V2 549 aa12.06□□□□□ -0.48
SF3B6-201ENST00000233468 DPCR1Q3MIW9 517 aa12.06□□□□□ -0.48
SF3B6-201ENST00000233468 CAVIN1Q6NZI2 390 aaKnown RBP12.06□□□□□ -0.48
SF3B6-201ENST00000233468 RSPO2Q6UXX9 243 aaPredicted RBP12.06□□□□□ -0.48
SF3B6-201ENST00000233468 TMC5Q6UXY8 1006 aa12.06□□□□□ -0.48
SF3B6-201ENST00000233468 SPATA31D4Q6ZUB0 917 aa12.06□□□□□ -0.48
SF3B6-201ENST00000233468 CREBRFQ8IUR6 639 aa12.06□□□□□ -0.48
SF3B6-201ENST00000233468 TMEM130Q8N3G9 435 aa12.06□□□□□ -0.48
SF3B6-201ENST00000233468 OR6B3Q8NGW1 331 aa12.06□□□□□ -0.48
SF3B6-201ENST00000233468 SLC7A14Q8TBB6 771 aa12.06□□□□□ -0.48
SF3B6-201ENST00000233468 SPPL2BQ8TCT7 592 aa12.06□□□□□ -0.48
SF3B6-201ENST00000233468 PRKD2Q9BZL6 878 aa12.06□□□□□ -0.48
SF3B6-201ENST00000233468 ZCWPW1Q9H0M4 648 aa12.06□□□□□ -0.48
SF3B6-201ENST00000233468 XYLT2Q9H1B5 865 aa12.06□□□□□ -0.48
SF3B6-201ENST00000233468 CYP3A43Q9HB55 503 aa12.06□□□□□ -0.48
SF3B6-201ENST00000233468 RAB20Q9NX57 234 aa12.06□□□□□ -0.48
SF3B6-201ENST00000233468 CDH9Q9ULB4 789 aa12.06□□□□□ -0.48
SF3B6-201ENST00000233468 NR2E1Q9Y466 385 aa12.06□□□□□ -0.48
SF3B6-201ENST00000233468 TDRD15B5MCY1 1934 aaKnown RBP12.05□□□□□ -0.48
SF3B6-201ENST00000233468 SPTBN4Q9H254 2564 aa12.05□□□□□ -0.48
SF3B6-201ENST00000233468 H0Y858 1186 aa12.05□□□□□ -0.48
SF3B6-201ENST00000233468 GABRDO14764 452 aa12.05□□□□□ -0.48
SF3B6-201ENST00000233468 PAPLNO95428 1278 aa12.05□□□□□ -0.48
SF3B6-201ENST00000233468 VNN1O95497 513 aa12.05□□□□□ -0.48
SF3B6-201ENST00000233468 ASS1P00966 412 aaKnown RBP12.05□□□□□ -0.48
SF3B6-201ENST00000233468 AFPP02771 609 aaKnown RBP12.05□□□□□ -0.48
SF3B6-201ENST00000233468 ASGR2P07307 311 aa12.05□□□□□ -0.48
SF3B6-201ENST00000233468 TPM2P07951 284 aa12.05□□□□□ -0.48
SF3B6-201ENST00000233468 SLC39A12Q504Y0 691 aa12.05□□□□□ -0.48
SF3B6-201ENST00000233468 INTS6LQ5JSJ4 861 aaKnown RBP12.05□□□□□ -0.48
SF3B6-201ENST00000233468 C1orf220Q5T0J3 134 aa12.05□□□□□ -0.48
SF3B6-201ENST00000233468 IQCEQ6IPM2 695 aa12.05□□□□□ -0.48
SF3B6-201ENST00000233468 C4orf50Q6ZRC1 276 aa12.05□□□□□ -0.48
SF3B6-201ENST00000233468 LIMS2Q7Z4I7 341 aa12.05□□□□□ -0.48
SF3B6-201ENST00000233468 SPNS2Q8IVW8 549 aa12.05□□□□□ -0.48
SF3B6-201ENST00000233468 ANKRD20A12PQ8NF67 263 aa12.05□□□□□ -0.48
SF3B6-201ENST00000233468 ENOX1Q8TC92 643 aaKnown RBP12.05□□□□□ -0.48
SF3B6-201ENST00000233468 TAS1R2Q8TE23 839 aa12.05□□□□□ -0.48
SF3B6-201ENST00000233468 SMG7Q92540 1137 aaKnown RBP12.05□□□□□ -0.48
SF3B6-201ENST00000233468 SLC35C1Q96A29 364 aa12.05□□□□□ -0.48
SF3B6-201ENST00000233468 FAM84AQ96KN4 292 aa12.05□□□□□ -0.48
SF3B6-201ENST00000233468 TNIP3Q96KP6 325 aa12.05□□□□□ -0.48
SF3B6-201ENST00000233468 PCDHB5Q9Y5E4 795 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms