RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 KCNJ1P48048 391 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 KLF1Q13351 362 aaPredicted RBP21.69■■□□□ 1.06
SNX3-201ENST00000230085 LRRC14Q15048 493 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 CCDC142Q17RM4 750 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 C11orf91Q3C1V1 193 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 CXCL17Q6UXB2 119 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 ABHD15Q6UXT9 468 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 SYCP3Q8IZU3 236 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 PCSK9Q8NBP7 692 aaKnown RBP21.69■■□□□ 1.06
SNX3-201ENST00000230085 UHMK1Q8TAS1 419 aaKnown RBP21.69■■□□□ 1.06
SNX3-201ENST00000230085 ZNF398Q8TD17 642 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 DENND1AQ8TEH3 1009 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 DDX1Q92499 740 aaKnown RBP21.69■■□□□ 1.06
SNX3-201ENST00000230085 ZNF653Q96CK0 615 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 TRIM11Q96F44 468 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 KREMEN1Q96MU8 473 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 TLE6Q9H808 572 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 USH1CQ9Y6N9 552 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 TMEM110-MUSTN1A8MSY1 372 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 KBTBD13C9JR72 458 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 ASMTLO95671 621 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 ZNF286BP0CG31 522 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 ATF2P15336 505 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 CYP11B1P15538 503 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 GTF2H1P32780 548 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 MXI1P50539 228 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 ACLYP53396 1101 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 ITGA8P53708 1063 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 SOX10P56693 466 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 GTF2BQ00403 316 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 PURAQ00577 322 aaKnown RBP21.69■■□□□ 1.06
SNX3-201ENST00000230085 CCNG2Q16589 344 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 MIS18BP1Q6P0N0 1132 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 ENOSF1Q7L5Y1 443 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 ANKS1BQ7Z6G8 1248 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 CCDC25Q86WR0 208 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 ERICH1Q86X53 443 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 TRIM50Q86XT4 487 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 CCDC89Q8N998 374 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 DIS3LQ8TF46 1054 aaKnown RBP21.69■■□□□ 1.06
SNX3-201ENST00000230085 RNPEPL1Q9HAU8 725 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 SSU72Q9NP77 194 aaKnown RBP21.69■■□□□ 1.06
SNX3-201ENST00000230085 ASIC3Q9UHC3 531 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 NAALADL1Q9UQQ1 740 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 PCDHA10Q9Y5I2 948 aa21.69■■□□□ 1.06
SNX3-201ENST00000230085 THAP12O43422 761 aa21.68■■□□□ 1.06
SNX3-201ENST00000230085 HIP1RO75146 1068 aa21.68■■□□□ 1.06
SNX3-201ENST00000230085 LYPLA2O95372 231 aa21.68■■□□□ 1.06
SNX3-201ENST00000230085 DLG4P78352 724 aa21.68■■□□□ 1.06
SNX3-201ENST00000230085 KCTD19Q17RG1 926 aaPredicted RBP21.68■■□□□ 1.06
SNX3-201ENST00000230085 WASHC2DQ5SRD0 308 aa21.68■■□□□ 1.06
SNX3-201ENST00000230085 MIER3Q7Z3K6 550 aa21.68■■□□□ 1.06
SNX3-201ENST00000230085 ARMC2Q8NEN0 867 aa21.68■■□□□ 1.06
SNX3-201ENST00000230085 KIFAP3Q92845 792 aa21.68■■□□□ 1.06
SNX3-201ENST00000230085 UTP4Q969X6 686 aaKnown RBP21.68■■□□□ 1.06
SNX3-201ENST00000230085 PCYT2Q99447 389 aa21.68■■□□□ 1.06
SNX3-201ENST00000230085 C16orf70Q9BSU1 422 aa21.68■■□□□ 1.06
SNX3-201ENST00000230085 TSEN34Q9BSV6 310 aaKnown RBP21.68■■□□□ 1.06
SNX3-201ENST00000230085 TMEM117Q9H0C3 514 aa21.68■■□□□ 1.06
SNX3-201ENST00000230085 ANAPC5Q9UJX4 755 aa21.68■■□□□ 1.06
SNX3-201ENST00000230085 WDR64B1ANS9 1081 aa21.67■■□□□ 1.06
SNX3-201ENST00000230085 NDC80O14777 642 aa21.67■■□□□ 1.06
SNX3-201ENST00000230085 CLDN3O15551 220 aa21.67■■□□□ 1.06
SNX3-201ENST00000230085 DCTN3O75935 186 aa21.67■■□□□ 1.06
SNX3-201ENST00000230085 LGALS2P05162 132 aa21.67■■□□□ 1.06
SNX3-201ENST00000230085 CALB2P22676 271 aa21.67■■□□□ 1.06
SNX3-201ENST00000230085 ZC3H12AQ5D1E8 599 aaKnown RBP21.67■■□□□ 1.06
SNX3-201ENST00000230085 SWSAP1Q6NVH7 229 aa21.67■■□□□ 1.06
SNX3-201ENST00000230085 ZNF677Q86XU0 584 aa21.67■■□□□ 1.06
SNX3-201ENST00000230085 TTC25Q96NG3 672 aa21.67■■□□□ 1.06
SNX3-201ENST00000230085 SMG5Q9UPR3 1016 aaKnown RBP21.67■■□□□ 1.06
SNX3-201ENST00000230085 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.67■■□□□ 1.06
SNX3-201ENST00000230085 ARHGEF35A5YM69 484 aa21.66■■□□□ 1.06
SNX3-201ENST00000230085 MOXD2PA6NHM9 499 aa21.66■■□□□ 1.06
SNX3-201ENST00000230085 SUPT20HL2P0C7V6 817 aa21.66■■□□□ 1.06
SNX3-201ENST00000230085 SFNP31947 248 aa21.66■■□□□ 1.06
SNX3-201ENST00000230085 GCKP35557 465 aa21.66■■□□□ 1.06
SNX3-201ENST00000230085 SETDB1Q15047 1291 aa21.66■■□□□ 1.06
SNX3-201ENST00000230085 KYNUQ16719 465 aa21.66■■□□□ 1.06
SNX3-201ENST00000230085 CLEC16AQ2KHT3 1053 aa21.66■■□□□ 1.06
SNX3-201ENST00000230085 KSR1Q8IVT5 923 aa21.66■■□□□ 1.06
SNX3-201ENST00000230085 CCDC60Q8IWA6 550 aaPredicted RBP21.66■■□□□ 1.06
SNX3-201ENST00000230085 ZCCHC9Q8N567 271 aaKnown RBP21.66■■□□□ 1.06
SNX3-201ENST00000230085 CEP120Q8N960 986 aa21.66■■□□□ 1.06
SNX3-201ENST00000230085 DHX38Q92620 1227 aaKnown RBP21.66■■□□□ 1.06
SNX3-201ENST00000230085 PHACTR1Q9C0D0 580 aa21.66■■□□□ 1.06
SNX3-201ENST00000230085 KCNK9Q9NPC2 374 aa21.66■■□□□ 1.06
SNX3-201ENST00000230085 WRAP73Q9P2S5 460 aaPredicted RBP21.66■■□□□ 1.06
SNX3-201ENST00000230085 FETUBQ9UGM5 382 aa21.66■■□□□ 1.06
SNX3-201ENST00000230085 IGKV6D-21A0A0A0MT36 114 aa21.66■■□□□ 1.06
SNX3-201ENST00000230085 PSTPIP1O43586 416 aa21.66■■□□□ 1.06
SNX3-201ENST00000230085 ZC3H11AO75152 810 aaKnown RBP eCLIP21.66■■□□□ 1.06
SNX3-201ENST00000230085 NEBLO76041 1014 aa21.66■■□□□ 1.06
SNX3-201ENST00000230085 DLATP10515 647 aaKnown RBP21.66■■□□□ 1.06
SNX3-201ENST00000230085 FOXN2P32314 431 aa21.66■■□□□ 1.06
SNX3-201ENST00000230085 RASSF2P50749 326 aa21.66■■□□□ 1.06
SNX3-201ENST00000230085 JAK3P52333 1124 aa21.66■■□□□ 1.06
SNX3-201ENST00000230085 CAPRIN2Q6IMN6 1127 aaKnown RBP21.66■■□□□ 1.06
SNX3-201ENST00000230085 DRICH1Q6PGQ1 229 aaPredicted RBP21.66■■□□□ 1.06
SNX3-201ENST00000230085 OTUD6AQ7L8S5 288 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms