RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 RAPGEF1Q13905 1077 aa15.99■□□□□ 0.15
RPA3-201ENST00000223129 KCNC3Q14003 757 aa15.99■□□□□ 0.15
RPA3-201ENST00000223129 MDH1BQ5I0G3 518 aa15.99■□□□□ 0.15
RPA3-201ENST00000223129 FAM171BQ6P995 826 aa15.99■□□□□ 0.15
RPA3-201ENST00000223129 DCP1BQ8IZD4 617 aaKnown RBP15.99■□□□□ 0.15
RPA3-201ENST00000223129 ATAD1Q8NBU5 361 aa15.99■□□□□ 0.15
RPA3-201ENST00000223129 B3GALNT2Q8NCR0 500 aa15.99■□□□□ 0.15
RPA3-201ENST00000223129 NEK11Q8NG66 645 aa15.99■□□□□ 0.15
RPA3-201ENST00000223129 NLRC4Q9NPP4 1024 aa15.99■□□□□ 0.15
RPA3-201ENST00000223129 SEC24AO95486 1093 aa15.98■□□□□ 0.15
RPA3-201ENST00000223129 GLP2RO95838 553 aa15.98■□□□□ 0.15
RPA3-201ENST00000223129 CALCAP01258 141 aa15.98■□□□□ 0.15
RPA3-201ENST00000223129 PNMA6AP0CW24 399 aaPredicted RBP15.98■□□□□ 0.15
RPA3-201ENST00000223129 POLR2FP61218 127 aaKnown RBP15.98■□□□□ 0.15
RPA3-201ENST00000223129 EP400NLQ6ZTU2 488 aa15.98■□□□□ 0.15
RPA3-201ENST00000223129 PPFIBP1Q86W92 1011 aa15.98■□□□□ 0.15
RPA3-201ENST00000223129 CRYBG2Q8N1P7 616 aa15.98■□□□□ 0.15
RPA3-201ENST00000223129 SLC4A11Q8NBS3 891 aa15.98■□□□□ 0.15
RPA3-201ENST00000223129 TMEM176AQ96HP8 235 aa15.98■□□□□ 0.15
RPA3-201ENST00000223129 CDCA3Q99618 268 aaPredicted RBP15.98■□□□□ 0.15
RPA3-201ENST00000223129 NAA15Q9BXJ9 866 aaKnown RBP15.98■□□□□ 0.15
RPA3-201ENST00000223129 CRISPLD1Q9H336 500 aa15.98■□□□□ 0.15
RPA3-201ENST00000223129 SLC27A5Q9Y2P5 690 aa15.98■□□□□ 0.15
RPA3-201ENST00000223129 PRUNE2Q8WUY3 3088 aa15.98■□□□□ 0.15
RPA3-201ENST00000223129 A0A1W2PQC6 194 aa15.97■□□□□ 0.15
RPA3-201ENST00000223129 MTMR11A4FU01 709 aa15.97■□□□□ 0.15
RPA3-201ENST00000223129 FOXN3O00409 490 aaPredicted RBP15.97■□□□□ 0.15
RPA3-201ENST00000223129 KRT5P13647 590 aa15.97■□□□□ 0.15
RPA3-201ENST00000223129 ATF2P15336 505 aa15.97■□□□□ 0.15
RPA3-201ENST00000223129 PBX1P40424 430 aa15.97■□□□□ 0.15
RPA3-201ENST00000223129 YWHAEP62258 255 aaKnown RBP15.97■□□□□ 0.15
RPA3-201ENST00000223129 CYP27A1Q02318 531 aa15.97■□□□□ 0.15
RPA3-201ENST00000223129 DUSP4Q13115 394 aa15.97■□□□□ 0.15
RPA3-201ENST00000223129 ADAM15Q13444 863 aa15.97■□□□□ 0.15
RPA3-201ENST00000223129 DRAP1Q14919 205 aaPredicted RBP15.97■□□□□ 0.15
RPA3-201ENST00000223129 ENOSF1Q7L5Y1 443 aa15.97■□□□□ 0.15
RPA3-201ENST00000223129 TTC39CQ8N584 583 aa15.97■□□□□ 0.15
RPA3-201ENST00000223129 TTC9BQ8N6N2 239 aa15.97■□□□□ 0.15
RPA3-201ENST00000223129 EFHBQ8N7U6 833 aa15.97■□□□□ 0.15
RPA3-201ENST00000223129 KREMEN2Q8NCW0 462 aa15.97■□□□□ 0.15
RPA3-201ENST00000223129 MYCBPAPQ8TBZ2 947 aa15.97■□□□□ 0.15
RPA3-201ENST00000223129 MYLPFQ96A32 169 aa15.97■□□□□ 0.15
RPA3-201ENST00000223129 PCED1BQ96HM7 432 aa15.97■□□□□ 0.15
RPA3-201ENST00000223129 TNIP3Q96KP6 325 aa15.97■□□□□ 0.15
RPA3-201ENST00000223129 HEXIM2Q96MH2 286 aaKnown RBP15.97■□□□□ 0.15
RPA3-201ENST00000223129 RHOBTB2Q9BYZ6 727 aa15.97■□□□□ 0.15
RPA3-201ENST00000223129 GPR88Q9GZN0 384 aa15.97■□□□□ 0.15
RPA3-201ENST00000223129 CYP4F11Q9HBI6 524 aa15.97■□□□□ 0.15
RPA3-201ENST00000223129 MAN1C1Q9NR34 630 aa15.97■□□□□ 0.15
RPA3-201ENST00000223129 ABI2Q9NYB9 513 aaPredicted RBP15.97■□□□□ 0.15
RPA3-201ENST00000223129 AFF4Q9UHB7 1163 aaKnown RBP15.97■□□□□ 0.15
RPA3-201ENST00000223129 CLDN5O00501 218 aa15.97■□□□□ 0.15
RPA3-201ENST00000223129 USP8P40818 1118 aa15.97■□□□□ 0.15
RPA3-201ENST00000223129 TPGS2Q68CL5 300 aa15.97■□□□□ 0.15
RPA3-201ENST00000223129 RBBP8NLQ8NC74 664 aaPredicted RBP15.97■□□□□ 0.15
RPA3-201ENST00000223129 SHC3Q92529 594 aa15.97■□□□□ 0.15
RPA3-201ENST00000223129 FAM81BQ96LP2 452 aa15.97■□□□□ 0.15
RPA3-201ENST00000223129 TRIM5Q9C035 493 aa15.97■□□□□ 0.15
RPA3-201ENST00000223129 FAM49BQ9NUQ9 324 aa15.97■□□□□ 0.15
RPA3-201ENST00000223129 CLDND1Q9NY35 253 aa15.97■□□□□ 0.15
RPA3-201ENST00000223129 FBXW11Q9UKB1 542 aa15.97■□□□□ 0.15
RPA3-201ENST00000223129 MTCL1Q9Y4B5 1905 aaKnown RBP15.96■□□□□ 0.15
RPA3-201ENST00000223129 CBFA2T2O43439 604 aa15.96■□□□□ 0.15
RPA3-201ENST00000223129 SOAT2O75908 522 aa15.96■□□□□ 0.15
RPA3-201ENST00000223129 CCDC130P13994 396 aa15.96■□□□□ 0.15
RPA3-201ENST00000223129 ELF1P32519 619 aa15.96■□□□□ 0.15
RPA3-201ENST00000223129 DLX2Q07687 328 aaPredicted RBP15.96■□□□□ 0.15
RPA3-201ENST00000223129 SKIV2LQ15477 1246 aaKnown RBP15.96■□□□□ 0.15
RPA3-201ENST00000223129 SARM1Q6SZW1 724 aa15.96■□□□□ 0.15
RPA3-201ENST00000223129 SPATA2LQ8IUW3 424 aaPredicted RBP15.96■□□□□ 0.15
RPA3-201ENST00000223129 GPIHBP1Q8IV16 184 aa15.96■□□□□ 0.15
RPA3-201ENST00000223129 FEZF2Q8TBJ5 459 aa15.96■□□□□ 0.15
RPA3-201ENST00000223129 JAKMIP2Q96AA8 810 aa15.96■□□□□ 0.15
RPA3-201ENST00000223129 B3GNT5Q9BYG0 378 aa15.96■□□□□ 0.15
RPA3-201ENST00000223129 FAM124BQ9H5Z6 455 aaPredicted RBP15.96■□□□□ 0.15
RPA3-201ENST00000223129 ACP6Q9NPH0 428 aa15.96■□□□□ 0.15
RPA3-201ENST00000223129 PCDHB5Q9Y5E4 795 aa15.96■□□□□ 0.15
RPA3-201ENST00000223129 CYP2F1P24903 491 aa15.95■□□□□ 0.14
RPA3-201ENST00000223129 NFE2Q16621 373 aaPredicted RBP15.95■□□□□ 0.14
RPA3-201ENST00000223129 CTC1Q2NKJ3 1217 aa15.95■□□□□ 0.14
RPA3-201ENST00000223129 UVSSAQ2YD98 709 aa15.95■□□□□ 0.14
RPA3-201ENST00000223129 PAQR9Q6ZVX9 377 aa15.95■□□□□ 0.14
RPA3-201ENST00000223129 C12orf76Q8N812 135 aaPredicted RBP15.95■□□□□ 0.14
RPA3-201ENST00000223129 STK33Q9BYT3 514 aa15.95■□□□□ 0.14
RPA3-201ENST00000223129 CNTN6Q9UQ52 1028 aa15.95■□□□□ 0.14
RPA3-201ENST00000223129 COL6A3P12111 3177 aa15.95■□□□□ 0.14
RPA3-201ENST00000223129 PRRG1O14668 218 aa15.95■□□□□ 0.14
RPA3-201ENST00000223129 RFPL2O75678 378 aa15.95■□□□□ 0.14
RPA3-201ENST00000223129 TPM3P06753 285 aa15.95■□□□□ 0.14
RPA3-201ENST00000223129 TRIM21P19474 475 aaKnown RBP15.95■□□□□ 0.14
RPA3-201ENST00000223129 BDNFP23560 247 aa15.95■□□□□ 0.14
RPA3-201ENST00000223129 ZNF132P52740 706 aa15.95■□□□□ 0.14
RPA3-201ENST00000223129 MAPRE1Q15691 268 aaKnown RBP15.95■□□□□ 0.14
RPA3-201ENST00000223129 PPP1R26Q5T8A7 1209 aaPredicted RBP15.95■□□□□ 0.14
RPA3-201ENST00000223129 SLC7A14Q8TBB6 771 aa15.95■□□□□ 0.14
RPA3-201ENST00000223129 SLC2A14Q8TDB8 520 aa15.95■□□□□ 0.14
RPA3-201ENST00000223129 CASP10Q92851 521 aa15.95■□□□□ 0.14
RPA3-201ENST00000223129 CYFIP2Q96F07 1278 aa15.95■□□□□ 0.14
RPA3-201ENST00000223129 ZNF518BQ9C0D4 1074 aa15.95■□□□□ 0.14
RPA3-201ENST00000223129 CLEC1BQ9P126 229 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms