RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 KLHL4Q9C0H6 718 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 SLITRK2Q9H156 845 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 BLMP54132 1417 aaPredicted RBP15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 CLPTM1O96005 669 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 CCT8P50990 548 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 ARHGDIBP52566 201 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 SRP54P61011 504 aaKnown RBP15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 MTM1Q13496 603 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 PADI6Q6TGC4 694 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 GATAD2AQ86YP4 633 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 RMND5BQ96G75 393 aaPredicted RBP15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 MCEEQ96PE7 176 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 C2orf40Q9H1Z8 148 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 COMMD9Q9P000 198 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 A0A1W2PP64 1363 aa15.18■□□□□ 0.02
SPTLC2-201ENST00000216484 EFCAB10A6NFE3 127 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 VWA5AO00534 786 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 KPNA4O00629 521 aaPredicted RBP15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 FOXP2O15409 715 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 IDH3BO43837 385 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 ORC2Q13416 577 aaPredicted RBP15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 ZNF333Q96JL9 665 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 TMEM79Q9BSE2 394 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 UBE2OQ9C0C9 1292 aaKnown RBP15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 POLR3FQ9H1D9 316 aaPredicted RBP15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 SCUBE2Q9NQ36 999 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 ENTPD7Q9NQZ7 604 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 ZNF24P17028 368 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 ARL6IP4Q66PJ3 421 aaKnown RBP15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 PROSER1Q86XN7 944 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 NSUN7Q8NE18 718 aaKnown RBP15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 NMRK2Q9NPI5 230 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 USP21Q9UK80 565 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 TRPC5OSA6NMA1 111 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 TAF13Q15543 124 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 C18orf8Q96DM3 657 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 ZSWIM5Q9P217 1185 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 LIMA1Q9UHB6 759 aaKnown RBP15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 PFASO15067 1338 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 POTEMA6NI47 508 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 PIK3CDO00329 1044 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 CDH16O75309 829 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 MED26O95402 600 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 SPRP35270 261 aaPredicted RBP15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 SERPINB9P50453 376 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 CAMK2GQ13555 558 aaPredicted RBP15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 DCTN2Q13561 401 aaKnown RBP15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 B3GALNT2Q8NCR0 500 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 CPA5Q8WXQ8 436 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 SPATA33Q96N06 139 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 MXD3Q9BW11 206 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 SNX13Q9Y5W8 968 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 CCDC88CQ9P219 2028 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 GNG14A0A1W2PPG7 69 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 AGTP01019 485 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 PTPN1P18031 435 aaKnown RBP15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 PSMB9P28065 219 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 LSP1P33241 339 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 GSSP48637 474 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 COASYQ13057 564 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 LPCAT2Q7L5N7 544 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 CLYBLQ8N0X4 340 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 TNIP3Q96KP6 325 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 KCTD10Q9H3F6 313 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 PCDHA6Q9UN73 950 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 PCDHA8Q9Y5H6 950 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 MAP3K19Q56UN5 1328 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 EMSYQ7Z589 1322 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 UHRF1BP1LA0JNW5 1464 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 IL5RAQ01344 420 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 MROH9Q5TGP6 573 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 ZNF512Q96ME7 567 aaPredicted RBP15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 CAMKK2Q96RR4 588 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 TRPM5Q9NZQ8 1165 aa15.17■□□□□ 0.02
SPTLC2-201ENST00000216484 MGAT4DA6NG13 374 aa15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 PCP4L1A6NKN8 68 aa15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 AKR1D1P51857 326 aa15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 BYSLQ13895 437 aaKnown RBP15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 FAM160B2Q86V87 743 aa15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 RMND5AQ9H871 391 aa15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 TOP2BQ02880 1626 aa15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 EIF3HO15372 352 aaKnown RBP eCLIP15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 TRIM3O75382 744 aaPredicted RBP15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 TTLL4Q14679 1199 aa15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 DGKDQ16760 1214 aa15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 KHDRBS3O75525 346 aaKnown RBP15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 PTK6Q13882 451 aa15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 ATP8B4Q8TF62 1192 aa15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 EPC1Q9H2F5 836 aa15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 AREL1O15033 823 aa15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 JAK1P23458 1154 aa15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 GRK4P32298 578 aa15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 CYP2C19P33261 490 aa15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 TTC39CQ8N584 583 aa15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 STN1Q9H668 368 aaKnown RBP15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 TRMT6Q9UJA5 497 aaKnown RBP15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 GRID1Q9ULK0 1009 aa15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 OR6B1O95007 311 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms