RNA–Protein interactions for RNA: ENST00000216274.9

RIPK3-201, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK3, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-201ENST00000216274 NXF1Q9UBU9 619 aaKnown RBP13.56□□□□□ -0.24
RIPK3-201ENST00000216274 RRN3P2A6NIE6 340 aa13.56□□□□□ -0.24
RIPK3-201ENST00000216274 CABYRO75952 493 aa13.56□□□□□ -0.24
RIPK3-201ENST00000216274 GAS8O95995 478 aa13.56□□□□□ -0.24
RIPK3-201ENST00000216274 MMP3P08254 477 aa13.56□□□□□ -0.24
RIPK3-201ENST00000216274 NFICP08651 508 aa13.56□□□□□ -0.24
RIPK3-201ENST00000216274 IQCF3P0C7M6 154 aa13.56□□□□□ -0.24
RIPK3-201ENST00000216274 CPT1AP50416 773 aa13.56□□□□□ -0.24
RIPK3-201ENST00000216274 PMS2P54278 862 aa13.56□□□□□ -0.24
RIPK3-201ENST00000216274 ZNF844Q08AG5 666 aa13.56□□□□□ -0.24
RIPK3-201ENST00000216274 CALCOCO2Q13137 446 aa13.56□□□□□ -0.24
RIPK3-201ENST00000216274 SLMAPQ14BN4 828 aa13.56□□□□□ -0.24
RIPK3-201ENST00000216274 SNX17Q15036 470 aa13.56□□□□□ -0.24
RIPK3-201ENST00000216274 GRIK4Q16099 956 aa13.56□□□□□ -0.24
RIPK3-201ENST00000216274 FSCN1Q16658 493 aaKnown RBP13.56□□□□□ -0.24
RIPK3-201ENST00000216274 DGKDQ16760 1214 aa13.56□□□□□ -0.24
RIPK3-201ENST00000216274 GNASQ5JWF2 1037 aa13.56□□□□□ -0.24
RIPK3-201ENST00000216274 SCARA3Q6AZY7 606 aa13.56□□□□□ -0.24
RIPK3-201ENST00000216274 JADE1Q6IE81 842 aa13.56□□□□□ -0.24
RIPK3-201ENST00000216274 DCUN1D2Q6PH85 259 aa13.56□□□□□ -0.24
RIPK3-201ENST00000216274 CROCCP2Q86T23 111 aa13.56□□□□□ -0.24
RIPK3-201ENST00000216274 CDR2LQ86X02 465 aaPredicted RBP13.56□□□□□ -0.24
RIPK3-201ENST00000216274 NT5DC4Q86YG4 428 aa13.56□□□□□ -0.24
RIPK3-201ENST00000216274 TTC39CQ8N584 583 aa13.56□□□□□ -0.24
RIPK3-201ENST00000216274 C1orf127Q8N9H9 656 aa13.56□□□□□ -0.24
RIPK3-201ENST00000216274 ADPGKQ9BRR6 497 aa13.56□□□□□ -0.24
RIPK3-201ENST00000216274 DCLK3Q9C098 648 aa13.56□□□□□ -0.24
RIPK3-201ENST00000216274 SENP6Q9GZR1 1112 aaPredicted RBP13.56□□□□□ -0.24
RIPK3-201ENST00000216274 VRTNQ9H8Y1 702 aa13.56□□□□□ -0.24
RIPK3-201ENST00000216274 WHRNQ9P202 907 aa13.56□□□□□ -0.24
RIPK3-201ENST00000216274 SIX4Q9UIU6 781 aa13.56□□□□□ -0.24
RIPK3-201ENST00000216274 POLIQ9UNA4 740 aa13.56□□□□□ -0.24
RIPK3-201ENST00000216274 USTQ9Y2C2 406 aa13.56□□□□□ -0.24
RIPK3-201ENST00000216274 ATP8A1Q9Y2Q0 1164 aa13.56□□□□□ -0.24
RIPK3-201ENST00000216274 ANK1P16157 1881 aa13.56□□□□□ -0.24
RIPK3-201ENST00000216274 TNRC18O15417 2968 aaPredicted RBP13.55□□□□□ -0.24
RIPK3-201ENST00000216274 DYNC1LI2O43237 492 aaPredicted RBP13.55□□□□□ -0.24
RIPK3-201ENST00000216274 VTNP04004 478 aa13.55□□□□□ -0.24
RIPK3-201ENST00000216274 CD19P15391 556 aa13.55□□□□□ -0.24
RIPK3-201ENST00000216274 NR1D1P20393 614 aa13.55□□□□□ -0.24
RIPK3-201ENST00000216274 ACLYP53396 1101 aa13.55□□□□□ -0.24
RIPK3-201ENST00000216274 TAS2R40P59535 323 aa13.55□□□□□ -0.24
RIPK3-201ENST00000216274 CDC42EP1Q00587 391 aa13.55□□□□□ -0.24
RIPK3-201ENST00000216274 IFFO1Q0D2I5 559 aa13.55□□□□□ -0.24
RIPK3-201ENST00000216274 PTK6Q13882 451 aa13.55□□□□□ -0.24
RIPK3-201ENST00000216274 PIGHQ14442 188 aaPredicted RBP13.55□□□□□ -0.24
RIPK3-201ENST00000216274 TMEM132DQ14C87 1099 aa13.55□□□□□ -0.24
RIPK3-201ENST00000216274 KCNA10Q16322 511 aa13.55□□□□□ -0.24
RIPK3-201ENST00000216274 DCAF4L1Q3SXM0 396 aa13.55□□□□□ -0.24
RIPK3-201ENST00000216274 ZNF394Q53GI3 561 aa13.55□□□□□ -0.24
RIPK3-201ENST00000216274 KCTD16Q68DU8 428 aa13.55□□□□□ -0.24
RIPK3-201ENST00000216274 LRRC31Q6UY01 552 aa13.55□□□□□ -0.24
RIPK3-201ENST00000216274 HOOK3Q86VS8 718 aa13.55□□□□□ -0.24
RIPK3-201ENST00000216274 TMEM192Q8IY95 271 aa13.55□□□□□ -0.24
RIPK3-201ENST00000216274 RCOR2Q8IZ40 523 aa13.55□□□□□ -0.24
RIPK3-201ENST00000216274 C3orf20Q8ND61 904 aa13.55□□□□□ -0.24
RIPK3-201ENST00000216274 FBXO25Q8TCJ0 367 aa13.55□□□□□ -0.24
RIPK3-201ENST00000216274 C1orf54Q8WWF1 131 aa13.55□□□□□ -0.24
RIPK3-201ENST00000216274 ART4Q93070 314 aa13.55□□□□□ -0.24
RIPK3-201ENST00000216274 SEZ6LQ9BYH1 1024 aa13.55□□□□□ -0.24
RIPK3-201ENST00000216274 A0A1W2PQ45 241 aaPredicted RBP13.54□□□□□ -0.24
RIPK3-201ENST00000216274 A0A1W2PQY0 241 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 TCRBV5S1A1TA0A578 114 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 MYADML2A6NDP7 307 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 KPNA6O60684 536 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 NUDT17P0C025 328 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 ARF4P18085 180 aaPredicted RBP13.54□□□□□ -0.24
RIPK3-201ENST00000216274 KCNJ1P48048 391 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 IRAK1P51617 712 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 HNRNPH2P55795 449 aaKnown RBP13.54□□□□□ -0.24
RIPK3-201ENST00000216274 GNGT1P63211 74 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 CAV1Q03135 178 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 KRT17Q04695 432 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 DENND2CQ68D51 928 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 DENND1BQ6P3S1 775 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 SH2D3CQ8N5H7 860 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 NIPA2Q8N8Q9 360 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 ATL2Q8NHH9 583 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 TFAP2BQ92481 460 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 CPB2Q96IY4 423 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 GLT1D1Q96MS3 346 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 OSBPL8Q9BZF1 889 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 TSPYL1Q9H0U9 437 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 PABPC3Q9H361 631 aaKnown RBP13.54□□□□□ -0.24
RIPK3-201ENST00000216274 DDX56Q9NY93 547 aaKnown RBP13.54□□□□□ -0.24
RIPK3-201ENST00000216274 WDR35Q9P2L0 1181 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 ITGA11Q9UKX5 1188 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 NR2E3Q9Y5X4 410 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 EVPLQ92817 2033 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 A6NJR5 290 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 TSPAN1O60635 241 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 STAU1O95793 577 aaKnown RBP13.54□□□□□ -0.24
RIPK3-201ENST00000216274 MYCNP04198 464 aaPredicted RBP13.54□□□□□ -0.24
RIPK3-201ENST00000216274 ITGB3P05106 788 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 ASGR1P07306 291 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 RALAP11233 206 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 ITIH2P19823 946 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 COPS2P61201 443 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 RBP5P82980 135 aa13.54□□□□□ -0.24
RIPK3-201ENST00000216274 CCNG2Q16589 344 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms