RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 PGM3O95394 542 aa10.88□□□□□ -0.67
VCL-201ENST00000211998 PRDX5P30044 214 aa10.88□□□□□ -0.67
VCL-201ENST00000211998 GPC3P51654 580 aa10.88□□□□□ -0.67
VCL-201ENST00000211998 KYAT1Q16773 422 aa10.88□□□□□ -0.67
VCL-201ENST00000211998 CEP95Q96GE4 821 aa10.88□□□□□ -0.67
VCL-201ENST00000211998 C6orf203Q9P0P8 240 aaPredicted RBP10.88□□□□□ -0.67
VCL-201ENST00000211998 SFMBT1Q9UHJ3 866 aa10.88□□□□□ -0.67
VCL-201ENST00000211998 RNF103O00237 685 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 KCNN4O15554 427 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 APRTP07741 180 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 CYP2D6P10635 497 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 ACTR2P61160 394 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 SGSM1Q2NKQ1 1148 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 C6orf10Q5SRN2 563 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 LMBRD2Q68DH5 695 aaPredicted RBP10.87□□□□□ -0.67
VCL-201ENST00000211998 POTEEQ6S8J3 1075 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 FAM162AQ96A26 154 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 WRNIP1Q96S55 665 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 TASP1Q9H6P5 420 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 RNF146Q9NTX7 359 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 LAMC1P11047 1609 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 PCP4L1A6NKN8 68 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 TFE3P19532 575 aaPredicted RBP10.87□□□□□ -0.67
VCL-201ENST00000211998 SSTR3P32745 418 aaPredicted RBP10.87□□□□□ -0.67
VCL-201ENST00000211998 AP3M2P53677 418 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 SNAP25P60880 206 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 LBRQ14739 615 aaKnown RBP10.87□□□□□ -0.67
VCL-201ENST00000211998 ZNF568Q3ZCX4 644 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 RBM44Q6ZP01 1051 aaKnown RBP10.87□□□□□ -0.67
VCL-201ENST00000211998 DEFB107AQ8IZN7 70 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 PPP1R16BQ96T49 567 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 FSD1LQ9BXM9 530 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 TMEM117Q9H0C3 514 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 ZHX2Q9Y6X8 837 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 EMSYQ7Z589 1322 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 SMIM31A0A1B0GVY4 71 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 SPAG6O75602 509 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 C4BPBP20851 252 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 FNTAP49354 379 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 NCKAP1LP55160 1127 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 IFI35P80217 286 aaPredicted RBP10.87□□□□□ -0.67
VCL-201ENST00000211998 NR1D2Q14995 579 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 MROH9Q5TGP6 573 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 TRIM69Q86WT6 500 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 ACTRT1Q8TDG2 376 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 ULK4Q96C45 1275 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 ERGIC2Q96RQ1 377 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 EFCAB1Q9HAE3 211 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 RAVER2Q9HCJ3 691 aaKnown RBP10.87□□□□□ -0.67
VCL-201ENST00000211998 POLE3Q9NRF9 147 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 RAB6BQ9NRW1 208 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 MAD2L2Q9UI95 211 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 TMCO1Q9UM00 188 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 PLAGL2Q9UPG8 496 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 PDZK1P1A8MUH7 402 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 PSTPIP1O43586 416 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 QARSP47897 775 aaKnown RBP10.87□□□□□ -0.67
VCL-201ENST00000211998 CDH6P55285 790 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 STX5Q13190 355 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 ELMOD1Q8N336 334 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 SEPT1Q8WYJ6 367 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 SYN2Q92777 582 aaPredicted RBP10.87□□□□□ -0.67
VCL-201ENST00000211998 WNK4Q96J92 1243 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 EPS8L2Q9H6S3 715 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 TDRD3Q9H7E2 651 aaKnown RBP10.87□□□□□ -0.67
VCL-201ENST00000211998 BARHL2Q9NY43 387 aa10.87□□□□□ -0.67
VCL-201ENST00000211998 CYP19A1P11511 503 aaPredicted RBP10.86□□□□□ -0.67
VCL-201ENST00000211998 CDH3P22223 829 aa10.86□□□□□ -0.67
VCL-201ENST00000211998 CENPCQ03188 943 aa10.86□□□□□ -0.67
VCL-201ENST00000211998 NFX1Q12986 1120 aaKnown RBP10.86□□□□□ -0.67
VCL-201ENST00000211998 KRT72Q14CN4 511 aa10.86□□□□□ -0.67
VCL-201ENST00000211998 MAPRE1Q15691 268 aaKnown RBP10.86□□□□□ -0.67
VCL-201ENST00000211998 TCHHL1Q5QJ38 904 aaPredicted RBP10.86□□□□□ -0.67
VCL-201ENST00000211998 ENOSF1Q7L5Y1 443 aa10.86□□□□□ -0.67
VCL-201ENST00000211998 URGCPQ8TCY9 931 aa10.86□□□□□ -0.67
VCL-201ENST00000211998 ISCA1Q9BUE6 129 aa10.86□□□□□ -0.67
VCL-201ENST00000211998 SEMA4AQ9H3S1 761 aa10.86□□□□□ -0.67
VCL-201ENST00000211998 HMG20AQ9NP66 347 aa10.86□□□□□ -0.67
VCL-201ENST00000211998 FAM205CA6NFA0 338 aa10.86□□□□□ -0.67
VCL-201ENST00000211998 ATP9BO43861 1147 aa10.86□□□□□ -0.67
VCL-201ENST00000211998 CCT3P49368 545 aaKnown RBP10.86□□□□□ -0.67
VCL-201ENST00000211998 GALK1P51570 392 aa10.86□□□□□ -0.67
VCL-201ENST00000211998 RNF220Q5VTB9 566 aa10.86□□□□□ -0.67
VCL-201ENST00000211998 RWDD4Q6NW29 188 aaKnown RBP10.86□□□□□ -0.67
VCL-201ENST00000211998 SLC13A5Q86YT5 568 aaPredicted RBP10.86□□□□□ -0.67
VCL-201ENST00000211998 KCND1Q9NSA2 647 aa10.86□□□□□ -0.67
VCL-201ENST00000211998 SLC9A1P19634 815 aa10.86□□□□□ -0.67
VCL-201ENST00000211998 PSMC5P62195 406 aa10.86□□□□□ -0.67
VCL-201ENST00000211998 EPHA10Q5JZY3 1008 aa10.86□□□□□ -0.67
VCL-201ENST00000211998 ELOA2Q8IYF1 753 aaPredicted RBP10.86□□□□□ -0.67
VCL-201ENST00000211998 C1orf50Q9BV19 199 aa10.86□□□□□ -0.67
VCL-201ENST00000211998 STAP1Q9ULZ2 295 aa10.86□□□□□ -0.67
VCL-201ENST00000211998 KDM6BO15054 1643 aa10.86□□□□□ -0.67
VCL-201ENST00000211998 FCHO1O14526 889 aa10.86□□□□□ -0.67
VCL-201ENST00000211998 IDH3BO43837 385 aa10.86□□□□□ -0.67
VCL-201ENST00000211998 BGNP21810 368 aa10.86□□□□□ -0.67
VCL-201ENST00000211998 RECQLP46063 649 aaPredicted RBP10.86□□□□□ -0.67
VCL-201ENST00000211998 RNF219Q5W0B1 726 aaPredicted RBP10.86□□□□□ -0.67
VCL-201ENST00000211998 TRIM72Q6ZMU5 477 aa10.86□□□□□ -0.67
VCL-201ENST00000211998 ACAD9Q9H845 621 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms