RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 SV2AQ7L0J3 742 aa19.65■□□□□ 0.74
MBD3-201ENST00000156825 DNAJC7Q99615 494 aa19.65■□□□□ 0.74
MBD3-201ENST00000156825 CXCL8P10145 99 aa19.65■□□□□ 0.74
MBD3-201ENST00000156825 IFNA8P32881 189 aa19.65■□□□□ 0.74
MBD3-201ENST00000156825 FBXW10Q5XX13 1052 aa19.65■□□□□ 0.74
MBD3-201ENST00000156825 CENPPQ6IPU0 288 aa19.65■□□□□ 0.74
MBD3-201ENST00000156825 PARP9Q8IXQ6 854 aa19.65■□□□□ 0.74
MBD3-201ENST00000156825 KIAA0895Q8NCT3 520 aa19.65■□□□□ 0.74
MBD3-201ENST00000156825 SLITRK1Q96PX8 696 aa19.65■□□□□ 0.74
MBD3-201ENST00000156825 SETD4Q9NVD3 440 aa19.65■□□□□ 0.74
MBD3-201ENST00000156825 PCDHGB4Q9UN71 923 aa19.65■□□□□ 0.74
MBD3-201ENST00000156825 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.65■□□□□ 0.743e-6■□□□□ 10.9
MBD3-201ENST00000156825 DIP2BQ9P265 1576 aa19.65■□□□□ 0.74
MBD3-201ENST00000156825 NAMPTP43490 491 aa19.65■□□□□ 0.74
MBD3-201ENST00000156825 DNAJC3Q13217 504 aa19.65■□□□□ 0.74
MBD3-201ENST00000156825 ZNF677Q86XU0 584 aa19.65■□□□□ 0.74
MBD3-201ENST00000156825 GRAMD1AQ96CP6 724 aa19.65■□□□□ 0.74
MBD3-201ENST00000156825 CARD9Q9H257 536 aa19.65■□□□□ 0.74
MBD3-201ENST00000156825 WDCPQ9H6R7 721 aa19.65■□□□□ 0.74
MBD3-201ENST00000156825 SH3BP1Q9Y3L3 701 aa19.65■□□□□ 0.74
MBD3-201ENST00000156825 AIM2O14862 343 aa19.65■□□□□ 0.74
MBD3-201ENST00000156825 EIF3HO15372 352 aaKnown RBP eCLIP19.65■□□□□ 0.74
MBD3-201ENST00000156825 POLBP06746 335 aa19.65■□□□□ 0.74
MBD3-201ENST00000156825 SH3BGRP55822 239 aaPredicted RBP19.65■□□□□ 0.74
MBD3-201ENST00000156825 PGBD3Q8N328 593 aa19.65■□□□□ 0.74
MBD3-201ENST00000156825 ICA1LQ8NDH6 482 aa19.65■□□□□ 0.74
MBD3-201ENST00000156825 SHCBP1Q8NEM2 672 aa19.65■□□□□ 0.74
MBD3-201ENST00000156825 TATDN2Q93075 761 aa19.65■□□□□ 0.74
MBD3-201ENST00000156825 APOL5Q9BWW9 433 aa19.65■□□□□ 0.74
MBD3-201ENST00000156825 RNF19AQ9NV58 838 aa19.65■□□□□ 0.74
MBD3-201ENST00000156825 IL1R1P14778 569 aa19.64■□□□□ 0.74
MBD3-201ENST00000156825 EPHX2P34913 555 aa19.64■□□□□ 0.74
MBD3-201ENST00000156825 OVGP1Q12889 678 aa19.64■□□□□ 0.74
MBD3-201ENST00000156825 TMED1Q13445 227 aa19.64■□□□□ 0.74
MBD3-201ENST00000156825 MPZL3Q6UWV2 235 aa19.64■□□□□ 0.74
MBD3-201ENST00000156825 LAYNQ6UX15 382 aa19.64■□□□□ 0.74
MBD3-201ENST00000156825 DENND5BQ6ZUT9 1274 aa19.64■□□□□ 0.74
MBD3-201ENST00000156825 ARMC2Q8NEN0 867 aa19.64■□□□□ 0.74
MBD3-201ENST00000156825 RPRD1AQ96P16 312 aaPredicted RBP19.64■□□□□ 0.74
MBD3-201ENST00000156825 DDX50Q9BQ39 737 aaKnown RBP19.64■□□□□ 0.74
MBD3-201ENST00000156825 SFMBT1Q9UHJ3 866 aa19.64■□□□□ 0.74
MBD3-201ENST00000156825 PKP3Q9Y446 797 aa19.64■□□□□ 0.74
MBD3-201ENST00000156825 MYO1DO94832 1006 aa19.64■□□□□ 0.73
MBD3-201ENST00000156825 HIST1H2AGP0C0S8 130 aaPredicted RBP19.64■□□□□ 0.73
MBD3-201ENST00000156825 PYGBP11216 843 aa19.64■□□□□ 0.73
MBD3-201ENST00000156825 HIST1H2ADP20671 130 aa19.64■□□□□ 0.73
MBD3-201ENST00000156825 HSD17B3P37058 310 aa19.64■□□□□ 0.73
MBD3-201ENST00000156825 HIC1Q14526 733 aa19.64■□□□□ 0.73
MBD3-201ENST00000156825 ZNF467Q7Z7K2 595 aaPredicted RBP19.64■□□□□ 0.73
MBD3-201ENST00000156825 HS6ST3Q8IZP7 471 aa19.64■□□□□ 0.73
MBD3-201ENST00000156825 LZICQ8WZA0 190 aa19.64■□□□□ 0.73
MBD3-201ENST00000156825 HIST1H2AHQ96KK5 128 aa19.64■□□□□ 0.73
MBD3-201ENST00000156825 HIST1H2AJQ99878 128 aa19.64■□□□□ 0.73
MBD3-201ENST00000156825 H2AFJQ9BTM1 129 aa19.64■□□□□ 0.73
MBD3-201ENST00000156825 OSBPL1AQ9BXW6 950 aa19.64■□□□□ 0.73
MBD3-201ENST00000156825 YIPF3Q9GZM5 350 aa19.64■□□□□ 0.73
MBD3-201ENST00000156825 AGO4Q9HCK5 861 aaKnown RBP19.64■□□□□ 0.73
MBD3-201ENST00000156825 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.64■□□□□ 0.733e-6■■■□□ 17.4
MBD3-201ENST00000156825 USP15Q9Y4E8 981 aaPredicted RBP19.64■□□□□ 0.73
MBD3-201ENST00000156825 TRIM49D1C9J1S8 452 aa19.64■□□□□ 0.73
MBD3-201ENST00000156825 ANGPT2O15123 496 aa19.64■□□□□ 0.73
MBD3-201ENST00000156825 SNRPAP09012 282 aaKnown RBP19.64■□□□□ 0.73
MBD3-201ENST00000156825 GRIK5Q16478 980 aa19.64■□□□□ 0.73
MBD3-201ENST00000156825 PLEKHH3Q7Z736 793 aa19.64■□□□□ 0.73
MBD3-201ENST00000156825 PPP1R13LQ8WUF5 828 aa19.64■□□□□ 0.73
MBD3-201ENST00000156825 TNS2Q63HR2 1409 aa19.64■□□□□ 0.73
MBD3-201ENST00000156825 MCF2P10911 925 aa19.64■□□□□ 0.73
MBD3-201ENST00000156825 SH3TC2Q8TF17 1288 aa19.64■□□□□ 0.73
MBD3-201ENST00000156825 OPTNQ96CV9 577 aa19.64■□□□□ 0.73
MBD3-201ENST00000156825 IL1RL2Q9HB29 575 aa19.64■□□□□ 0.73
MBD3-201ENST00000156825 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.64■□□□□ 0.73
MBD3-201ENST00000156825 WNT10BO00744 389 aa19.63■□□□□ 0.73
MBD3-201ENST00000156825 CHRM3P20309 590 aa19.63■□□□□ 0.73
MBD3-201ENST00000156825 GTF2A2P52657 109 aa19.63■□□□□ 0.73
MBD3-201ENST00000156825 SNRPFP62306 86 aaKnown RBP19.63■□□□□ 0.73
MBD3-201ENST00000156825 HERVK_113P62684 666 aa19.63■□□□□ 0.73
MBD3-201ENST00000156825 GPR63Q9BZJ6 419 aa19.63■□□□□ 0.73
MBD3-201ENST00000156825 SPATS2LQ9NUQ6 558 aaKnown RBP19.63■□□□□ 0.73
MBD3-201ENST00000156825 KIF17Q9P2E2 1029 aa19.63■□□□□ 0.73
MBD3-201ENST00000156825 ZC3H13Q5T200 1668 aaKnown RBP19.63■□□□□ 0.73
MBD3-201ENST00000156825 A0A087X0B3 334 aa19.63■□□□□ 0.73
MBD3-201ENST00000156825 SPRP35270 261 aaPredicted RBP19.63■□□□□ 0.73
MBD3-201ENST00000156825 SYTL3Q4VX76 610 aa19.63■□□□□ 0.73
MBD3-201ENST00000156825 ZRANB3Q5FWF4 1079 aa19.63■□□□□ 0.73
MBD3-201ENST00000156825 ATP8B4Q8TF62 1192 aa19.63■□□□□ 0.73
MBD3-201ENST00000156825 KAT2BQ92831 832 aa19.63■□□□□ 0.73
MBD3-201ENST00000156825 VIPAS39Q9H9C1 493 aa19.63■□□□□ 0.73
MBD3-201ENST00000156825 ADARB2Q9NS39 739 aaKnown RBP19.63■□□□□ 0.73
MBD3-201ENST00000156825 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.63■□□□□ 0.73
MBD3-201ENST00000156825 PCDHB7Q9Y5E2 793 aa19.63■□□□□ 0.73
MBD3-201ENST00000156825 RNF180Q86T96 592 aa19.63■□□□□ 0.73
MBD3-201ENST00000156825 MMGT1Q8N4V1 131 aa19.63■□□□□ 0.73
MBD3-201ENST00000156825 DMGDHQ9UI17 866 aaKnown RBP19.63■□□□□ 0.73
MBD3-201ENST00000156825 SUPT3HB4E1H0 165 aa19.63■□□□□ 0.73
MBD3-201ENST00000156825 CYB561D2O14569 222 aa19.63■□□□□ 0.73
MBD3-201ENST00000156825 SUPT3HO75486 399 aa19.63■□□□□ 0.73
MBD3-201ENST00000156825 DNAJC8O75937 253 aaPredicted RBP19.63■□□□□ 0.73
MBD3-201ENST00000156825 ALDH7A1P49419 539 aaKnown RBP19.63■□□□□ 0.73
MBD3-201ENST00000156825 HARS2P49590 506 aaKnown RBP19.63■□□□□ 0.73
MBD3-201ENST00000156825 UGP2Q16851 508 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms