RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 TGFB2P61812 414 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 RAB6CQ53S08 254 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 DCAF15Q66K64 600 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 PPP1R21Q6ZMI0 780 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 RFX6Q8HWS3 928 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 WDTC1Q8N5D0 677 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 FAM71DQ8N9W8 422 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 RSAD2Q8WXG1 361 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 MAK16Q9BXY0 300 aaKnown RBP8.72□□□□□ -1.01
CDC27-201ENST00000066544 RAB6CQ9H0N0 254 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 GRID1Q9ULK0 1009 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 KIAA1217Q5T5P2 1943 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 TCRBV7S3A2A0A539 114 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 ATP2A1O14983 1001 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 ADCY3O60266 1144 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 CBX6O95503 412 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 ADRA1DP25100 572 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 IL1R2P27930 398 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 CTCFP49711 727 aaPredicted RBP8.72□□□□□ -1.01
CDC27-201ENST00000066544 ERFP50548 548 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 VCPP55072 806 aaKnown RBP8.72□□□□□ -1.01
CDC27-201ENST00000066544 HIF1AQ16665 826 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 LVRNQ6Q4G3 990 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 CENPUQ71F23 418 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 MAGEB18Q96M61 343 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 NIF3L1Q9GZT8 377 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 MYLK2Q9H1R3 596 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 NPHS2Q9NP85 383 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 RNF19AQ9NV58 838 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 hCG_1818297A0A087WSY0 165 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 LDHAP00338 332 aaKnown RBP8.72□□□□□ -1.01
CDC27-201ENST00000066544 GSTA1P08263 222 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 GCAP28676 217 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 CLCN3P51790 818 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 SPARCL1Q14515 664 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 DUOXA2Q1HG44 320 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 TFDP3Q5H9I0 405 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 ALLCQ8N6M5 410 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 ANKLE1Q8NAG6 615 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 FBF1Q8TES7 1133 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 PCYT2Q99447 389 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 ANP32DO95626 131 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 ITGBL1O95965 494 aaPredicted RBP8.72□□□□□ -1.01
CDC27-201ENST00000066544 PRKCBP05771 671 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 CALB1P05937 261 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 ARL2P36404 184 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 BNIP1Q12981 228 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 MMRN1Q13201 1228 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 EAPPQ56P03 285 aaPredicted RBP8.72□□□□□ -1.01
CDC27-201ENST00000066544 NPNTQ6UXI9 565 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 C3orf62Q6ZUJ4 267 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 UNC45BQ8IWX7 931 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 KIAA0319LQ8IZA0 1049 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 UBA3Q8TBC4 463 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 METTL5Q9NRN9 209 aaKnown RBP8.72□□□□□ -1.01
CDC27-201ENST00000066544 F5H423 210 aaPredicted RBP8.72□□□□□ -1.01
CDC27-201ENST00000066544 OAS1P00973 400 aaKnown RBP8.72□□□□□ -1.01
CDC27-201ENST00000066544 CXCL8P10145 99 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 SLC8A1P32418 973 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 RTP1P59025 263 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 SETDB1Q15047 1291 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 MTFR1Q15390 333 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 XRRA1Q6P2D8 792 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 BRSK2Q8IWQ3 736 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 PALM2Q8IXS6 379 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 COPS5Q92905 334 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 NRBP2Q9NSY0 501 aa8.72□□□□□ -1.01
CDC27-201ENST00000066544 NOP56O00567 594 aaKnown RBP8.71□□□□□ -1.01
CDC27-201ENST00000066544 FGFR1P11362 822 aa8.71□□□□□ -1.01
CDC27-201ENST00000066544 ELF1P32519 619 aa8.71□□□□□ -1.01
CDC27-201ENST00000066544 LMNB2Q03252 620 aa8.71□□□□□ -1.01
CDC27-201ENST00000066544 MAPK6Q16659 721 aa8.71□□□□□ -1.01
CDC27-201ENST00000066544 HSDL1Q3SXM5 330 aa8.71□□□□□ -1.01
CDC27-201ENST00000066544 SH3PXD2AQ5TCZ1 1133 aa8.71□□□□□ -1.01
CDC27-201ENST00000066544 GGA3Q9NZ52 723 aa8.71□□□□□ -1.01
CDC27-201ENST00000066544 HMGXB4Q9UGU5 601 aa8.71□□□□□ -1.01
CDC27-201ENST00000066544 CYTH4Q9UIA0 394 aa8.71□□□□□ -1.01
CDC27-201ENST00000066544 GINS2Q9Y248 185 aa8.71□□□□□ -1.01
CDC27-201ENST00000066544 NFKBIEO00221 500 aa8.71□□□□□ -1.01
CDC27-201ENST00000066544 CDKN2BP42772 138 aa8.71□□□□□ -1.01
CDC27-201ENST00000066544 MSH2P43246 934 aa8.71□□□□□ -1.01
CDC27-201ENST00000066544 DALRD3Q5D0E6 543 aaKnown RBP8.71□□□□□ -1.01
CDC27-201ENST00000066544 FNBP1LQ5T0N5 605 aa8.71□□□□□ -1.01
CDC27-201ENST00000066544 TREML2Q5T2D2 321 aa8.71□□□□□ -1.01
CDC27-201ENST00000066544 SCYL2Q6P3W7 929 aa8.71□□□□□ -1.01
CDC27-201ENST00000066544 CTAGE3PQ8IX95 158 aa8.71□□□□□ -1.01
CDC27-201ENST00000066544 KCTD6Q8NC69 237 aa8.71□□□□□ -1.01
CDC27-201ENST00000066544 CPXM1Q96SM3 734 aa8.71□□□□□ -1.01
CDC27-201ENST00000066544 RXFP1Q9HBX9 757 aa8.71□□□□□ -1.01
CDC27-201ENST00000066544 GPATCH2LQ9NWQ4 482 aa8.71□□□□□ -1.01
CDC27-201ENST00000066544 LRCH4O75427 683 aa8.71□□□□□ -1.02
CDC27-201ENST00000066544 TOM1L1O75674 476 aa8.71□□□□□ -1.02
CDC27-201ENST00000066544 YWHAGP61981 247 aaKnown RBP eCLIP8.71□□□□□ -1.02
CDC27-201ENST00000066544 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.71□□□□□ -1.02
CDC27-201ENST00000066544 FBXO36Q8NEA4 188 aa8.71□□□□□ -1.02
CDC27-201ENST00000066544 TRPM4Q8TD43 1214 aa8.71□□□□□ -1.02
CDC27-201ENST00000066544 TWNKQ96RR1 684 aa8.71□□□□□ -1.02
CDC27-201ENST00000066544 MRPL4Q9BYD3 311 aaKnown RBP8.71□□□□□ -1.02
CDC27-201ENST00000066544 LGALS13Q9UHV8 139 aa8.71□□□□□ -1.02
CDC27-201ENST00000066544 A0A0G2JND7 137 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms