RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 COPB1P53618 953 aaKnown RBP12.85□□□□□ -0.35
SYPL1-201ENST00000011473 CYP27A1Q02318 531 aa12.85□□□□□ -0.35
SYPL1-201ENST00000011473 KCNMA1Q12791 1236 aa12.85□□□□□ -0.35
SYPL1-201ENST00000011473 MGAT5BQ3V5L5 792 aa12.85□□□□□ -0.35
SYPL1-201ENST00000011473 B3GALNT2Q8NCR0 500 aa12.85□□□□□ -0.35
SYPL1-201ENST00000011473 SMRP1Q8NCR6 262 aa12.85□□□□□ -0.35
SYPL1-201ENST00000011473 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.85□□□□□ -0.35
SYPL1-201ENST00000011473 WHAMMQ8TF30 809 aa12.85□□□□□ -0.35
SYPL1-201ENST00000011473 MYLPFQ96A32 169 aa12.85□□□□□ -0.35
SYPL1-201ENST00000011473 SEPT5Q99719 369 aaPredicted RBP12.85□□□□□ -0.35
SYPL1-201ENST00000011473 S1PR5Q9H228 398 aa12.85□□□□□ -0.35
SYPL1-201ENST00000011473 PLEKHA4Q9H4M7 779 aa12.85□□□□□ -0.35
SYPL1-201ENST00000011473 THEGQ9P2T0 379 aa12.85□□□□□ -0.35
SYPL1-201ENST00000011473 LIMA1Q9UHB6 759 aaKnown RBP12.85□□□□□ -0.35
SYPL1-201ENST00000011473 CDH9Q9ULB4 789 aa12.85□□□□□ -0.35
SYPL1-201ENST00000011473 CILPO75339 1184 aa12.84□□□□□ -0.35
SYPL1-201ENST00000011473 ZMYND10O75800 440 aa12.84□□□□□ -0.35
SYPL1-201ENST00000011473 PTPN1P18031 435 aaKnown RBP12.84□□□□□ -0.35
SYPL1-201ENST00000011473 CYP2F1P24903 491 aa12.84□□□□□ -0.35
SYPL1-201ENST00000011473 GPR15P49685 360 aa12.84□□□□□ -0.35
SYPL1-201ENST00000011473 INCA1Q0VD86 236 aa12.84□□□□□ -0.35
SYPL1-201ENST00000011473 PPM1LQ5SGD2 360 aa12.84□□□□□ -0.35
SYPL1-201ENST00000011473 TPGS2Q68CL5 300 aa12.84□□□□□ -0.35
SYPL1-201ENST00000011473 DCP1BQ8IZD4 617 aaKnown RBP12.84□□□□□ -0.35
SYPL1-201ENST00000011473 GPR152Q8TDT2 470 aa12.84□□□□□ -0.35
SYPL1-201ENST00000011473 KREMEN1Q96MU8 473 aa12.84□□□□□ -0.35
SYPL1-201ENST00000011473 OXCT2Q9BYC2 517 aaPredicted RBP12.84□□□□□ -0.35
SYPL1-201ENST00000011473 ELOVL4Q9GZR5 314 aa12.84□□□□□ -0.35
SYPL1-201ENST00000011473 SFXN1Q9H9B4 322 aa12.84□□□□□ -0.35
SYPL1-201ENST00000011473 CYP3A43Q9HB55 503 aa12.84□□□□□ -0.35
SYPL1-201ENST00000011473 UBE2TQ9NPD8 197 aaPredicted RBP12.84□□□□□ -0.35
SYPL1-201ENST00000011473 FAM49BQ9NUQ9 324 aa12.84□□□□□ -0.35
SYPL1-201ENST00000011473 CD207Q9UJ71 328 aa12.84□□□□□ -0.35
SYPL1-201ENST00000011473 AJAP1Q9UKB5 411 aaPredicted RBP12.84□□□□□ -0.35
SYPL1-201ENST00000011473 COG5Q9UP83 839 aa12.84□□□□□ -0.35
SYPL1-201ENST00000011473 INSL5Q9Y5Q6 135 aa12.84□□□□□ -0.35
SYPL1-201ENST00000011473 BRWD1Q9NSI6 2320 aa12.84□□□□□ -0.35
SYPL1-201ENST00000011473 GRXCR2A6NFK2 248 aa12.83□□□□□ -0.35
SYPL1-201ENST00000011473 CALCAP01258 141 aa12.83□□□□□ -0.35
SYPL1-201ENST00000011473 CCDC130P13994 396 aa12.83□□□□□ -0.35
SYPL1-201ENST00000011473 TWF1Q12792 350 aa12.83□□□□□ -0.35
SYPL1-201ENST00000011473 SDHAF4Q5VUM1 108 aa12.83□□□□□ -0.35
SYPL1-201ENST00000011473 FAM171BQ6P995 826 aa12.83□□□□□ -0.35
SYPL1-201ENST00000011473 TCEAL8Q8IYN2 117 aa12.83□□□□□ -0.35
SYPL1-201ENST00000011473 ANKRD20A12PQ8NF67 263 aa12.83□□□□□ -0.35
SYPL1-201ENST00000011473 SPATA18Q8TC71 538 aa12.83□□□□□ -0.35
SYPL1-201ENST00000011473 ZNF707Q96C28 371 aaPredicted RBP12.83□□□□□ -0.35
SYPL1-201ENST00000011473 SIX2Q9NPC8 291 aa12.83□□□□□ -0.35
SYPL1-201ENST00000011473 DZANK1Q9NVP4 752 aa12.83□□□□□ -0.35
SYPL1-201ENST00000011473 HCFC1R1Q9NWW0 138 aa12.83□□□□□ -0.35
SYPL1-201ENST00000011473 GOLGA6L19H0YKK7 550 aa12.83□□□□□ -0.36
SYPL1-201ENST00000011473 HOXB8P17481 243 aaPredicted RBP12.83□□□□□ -0.36
SYPL1-201ENST00000011473 SP100P23497 879 aaPredicted RBP12.83□□□□□ -0.36
SYPL1-201ENST00000011473 BDNFP23560 247 aa12.83□□□□□ -0.36
SYPL1-201ENST00000011473 ZNF445P59923 1031 aa12.83□□□□□ -0.36
SYPL1-201ENST00000011473 SPATA2LQ8IUW3 424 aaPredicted RBP12.83□□□□□ -0.36
SYPL1-201ENST00000011473 MYCBPAPQ8TBZ2 947 aa12.83□□□□□ -0.36
SYPL1-201ENST00000011473 NAP1L5Q96NT1 182 aaPredicted RBP12.83□□□□□ -0.36
SYPL1-201ENST00000011473 NT5C1AQ9BXI3 368 aa12.83□□□□□ -0.36
SYPL1-201ENST00000011473 ADAM7Q9H2U9 754 aa12.83□□□□□ -0.36
SYPL1-201ENST00000011473 TMEM30AQ9NV96 361 aa12.83□□□□□ -0.36
SYPL1-201ENST00000011473 USP15Q9Y4E8 981 aaPredicted RBP12.83□□□□□ -0.36
SYPL1-201ENST00000011473 YIPF1Q9Y548 306 aa12.83□□□□□ -0.36
SYPL1-201ENST00000011473 PCDHB5Q9Y5E4 795 aa12.83□□□□□ -0.36
SYPL1-201ENST00000011473 GTPBP10A4D1E9 387 aaKnown RBP12.82□□□□□ -0.36
SYPL1-201ENST00000011473 LRRC10BA6NIK2 292 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 LGALS16A8MUM7 142 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 TEX33O43247 280 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 TPM2P07951 284 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 PNMA6AP0CW24 399 aaPredicted RBP12.82□□□□□ -0.36
SYPL1-201ENST00000011473 IL9P15248 144 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 ATF6P18850 670 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 TBXAS1P24557 533 aaPredicted RBP12.82□□□□□ -0.36
SYPL1-201ENST00000011473 CACNA2D1P54289 1103 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 NTHL1P78549 312 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 UBXN1Q04323 297 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 NFE2Q16621 373 aaPredicted RBP12.82□□□□□ -0.36
SYPL1-201ENST00000011473 DDR2Q16832 855 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 ARHGAP44Q17R89 818 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 PTCRAQ6ISU1 281 aaPredicted RBP12.82□□□□□ -0.36
SYPL1-201ENST00000011473 TMEM270Q6UE05 265 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 CCDC149Q6ZUS6 474 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 TNIP3Q96KP6 325 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 LSM14BQ9BX40 385 aaKnown RBP12.82□□□□□ -0.36
SYPL1-201ENST00000011473 B3GNT5Q9BYG0 378 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 ZNF518BQ9C0D4 1074 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 FAM207AQ9NSI2 230 aaPredicted RBP12.82□□□□□ -0.36
SYPL1-201ENST00000011473 APEX2Q9UBZ4 518 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 DPP7Q9UHL4 492 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 RNF225M0QZC1 329 aaPredicted RBP12.82□□□□□ -0.36
SYPL1-201ENST00000011473 EPHB6O15197 1021 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 MBTPS2O43462 519 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 CAVIN2O95810 425 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 SERPINC1P01008 464 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 LRG1P02750 347 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 FAM163BP0C2L3 166 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 ACO1P21399 889 aaKnown RBP12.82□□□□□ -0.36
SYPL1-201ENST00000011473 RAD23BP54727 409 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 GCNT1Q02742 428 aa12.82□□□□□ -0.36
SYPL1-201ENST00000011473 LEXMQ3ZCV2 418 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms