RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Sgf29Q9DA08 293 aaKnown RBP13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Dpy19l4A2AJQ3 722 aa13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Mocs3A2BDX3 460 aaKnown RBP13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Siah3B2RWG3 268 aa13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Adgrf2E9Q4J9 644 aa13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 AgxtO35423 414 aa13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Apba3O88888 571 aa13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Serpinh1P19324 417 aaKnown RBP13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Aimp1P31230 310 aaKnown RBP13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 VdrP48281 422 aa13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 MafbP54841 323 aa13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Rpl22P67984 128 aaKnown RBP13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Tmem63bQ3TWI9 832 aa13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Ubn1Q4G0F8 1135 aa13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Syce2Q505B8 171 aa13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Gm11437Q5QR91 290 aa13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Vps72Q62481 368 aa13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Daam1Q8BPM0 1077 aa13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Smtnl2Q8CI12 456 aa13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Vps37bQ8R0J7 285 aa13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Epn3Q91W69 636 aa13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Tm9sf1Q9DBU0 606 aa13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Sbno2Q7TNB8 1349 aa13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Znf536Q8K083 1302 aa13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Trip11E9Q512 1976 aa13.55□□□□□ -0.24
Nup88-203ENSMUST00000108531 Icam1P13597 537 aaKnown RBP13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 AmhP27106 555 aa13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 BtkP35991 659 aa13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 Cap1P40124 474 aa13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 Kcna2P63141 499 aa13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 Rasgrf2P70392 1189 aa13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 Sh3bp2Q06649 559 aa13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 XiapQ60989 496 aa13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 Ush1gQ80T11 461 aa13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 Phka2Q8BWJ3 1235 aa13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 NemfQ8CCP0 1064 aaKnown RBP13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 Lin7aQ8JZS0 233 aa13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 Slc12a9Q99MR3 914 aa13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 Bcs1lQ9CZP5 418 aa13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 Rpap3Q9D706 660 aa13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 Atp6v1g2Q9WTT4 118 aa13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 Ifnar2O35664 513 aa13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 DffaO54786 331 aa13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 Krt13P08730 437 aa13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 Hcls1P49710 486 aaKnown RBP13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 Elf3Q3UPW2 391 aa13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 Itga1Q3V3R4 1179 aa13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 Tmem65Q4VAE3 234 aa13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 Pik3r5Q5SW28 871 aa13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 Tmem45aQ60774 273 aa13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 Prr18Q6PAN7 307 aa13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 Plppr4Q7TME0 766 aa13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 Vmn2r43Q80Z08 845 aa13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 Serpinb13Q8CDC0 389 aa13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 Znf276Q8CE64 614 aa13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 UvragQ8K245 698 aa13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 Rpp40Q8R1F9 363 aa13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 Ndfip2Q91ZP6 311 aa13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 Q9CQC3 228 aa13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 Castor1Q9CWQ8 331 aa13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 Hes6Q9JHE6 224 aa13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 Gabbr1Q9WV18 960 aa13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 Nr1h3Q9Z0Y9 445 aa13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 Mtmr1Q9Z2C4 669 aa13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 SktA2AQ25 1946 aaKnown RBP13.54□□□□□ -0.24
Nup88-203ENSMUST00000108531 Fam47eD3YWC7 402 aa13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 Adamts10P58459 1104 aa13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 Smyd1P97443 490 aa13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 Grm1P97772 1199 aa13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 Tff2Q03404 129 aa13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 Togaram2Q3TYG6 1002 aa13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 AcrbpQ3V140 540 aa13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 Orc2Q60862 576 aaKnown RBP13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 Acvrl1Q61288 502 aa13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 Sh3rf1Q69ZI1 892 aa13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 Znf12Q7TSI0 686 aa13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 Olfr390Q8VEZ7 311 aa13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 HlcsQ920N2 722 aa13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 Atad3Q925I1 591 aa13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 Adi1Q99JT9 179 aa13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 Trpc2Q9R244 1172 aa13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 Gm10801F7C7Q0 168 aa13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 Srpk1O70551 648 aaKnown RBP13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 Nr2c2P49117 596 aa13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 Ccng1P51945 294 aa13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 Dab2P98078 766 aa13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 Ly9Q01965 654 aa13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 Mark3Q03141 753 aa13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 Pi4k2aQ2TBE6 479 aa13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 Slc17a7Q3TXX4 560 aa13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 Rab34Q64008 259 aa13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 Trim24Q64127 1051 aaKnown RBP13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 OcrlQ6NVF0 900 aa13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 Sh3tc2Q80VA5 1289 aa13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 Znf76Q8BMU0 568 aa13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 Polr2bQ8CFI7 1174 aaKnown RBP13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 C8aQ8K182 587 aa13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 Pdik1lQ8QZR7 341 aa13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 Stx18Q8VDS8 334 aa13.53□□□□□ -0.24
Nup88-203ENSMUST00000108531 CmasQ99KK2 432 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 30.3 ms