RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Eif2b5Q8CHW4 717 aa23.99■■□□□ 1.43
Scn1b-201ENSMUST00000098548 BbxQ8VBW5 907 aa23.99■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Mcoln1Q99J21 580 aa23.99■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Ly6kQ9CWP4 154 aa23.99■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Med7Q9CZB6 233 aa23.99■■□□□ 1.43
Scn1b-201ENSMUST00000098548 1700123K08RikQ9D991 295 aa23.99■■□□□ 1.43
Scn1b-201ENSMUST00000098548 IdeQ9JHR7 1019 aa23.99■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Gm28036V9GXJ1 658 aa23.99■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Dpy19l4A2AJQ3 722 aa23.98■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Gm4846B2RWH8 538 aa23.98■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Mgat1P27808 447 aa23.98■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Gdf6P43028 454 aa23.98■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Vsnl1P62761 191 aa23.98■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Upf3aQ3ULJ3 422 aa23.98■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Vwa2Q70UZ7 791 aa23.98■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Tbx22Q8K402 517 aa23.98■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Sdcbp2Q99JZ0 292 aa23.98■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Satl1Q9D5N8 744 aa23.98■■□□□ 1.43
Scn1b-201ENSMUST00000098548 CtsfQ9R013 462 aa23.98■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Grk1Q9WVL4 564 aa23.98■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Cyp2b13A6H6J2 491 aa23.97■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Cyp17a1P27786 507 aa23.97■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Cracr2aQ3UP38 310 aa23.97■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Ift20Q61025 132 aa23.97■■□□□ 1.43
Scn1b-201ENSMUST00000098548 EsrrbQ61539 433 aa23.97■■□□□ 1.43
Scn1b-201ENSMUST00000098548 CochQ62507 552 aa23.97■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Mysm1Q69Z66 819 aa23.97■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Slc7a14Q8BXR1 771 aa23.97■■□□□ 1.43
Scn1b-201ENSMUST00000098548 LgsnQ8CIX8 563 aa23.97■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Arl2bpQ9D385 163 aa23.97■■□□□ 1.43
Scn1b-201ENSMUST00000098548 PirQ9D711 290 aa23.97■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Rab13Q9DD03 202 aa23.97■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Hsd3b7Q9EQC1 369 aa23.97■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Gm3002E9PW72 216 aa23.96■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Myo1eE9Q634 1107 aa23.96■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Gm11236J3QMS7 360 aa23.96■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Itgb3O54890 787 aa23.96■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Ass1P16460 412 aa23.96■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Gp1bbP56400 206 aa23.96■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Tmprss15P97435 1069 aa23.96■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Rplp2P99027 115 aaKnown RBP23.96■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Sema5aQ62217 1077 aa23.96■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Gucy2gQ6TL19 1100 aa23.96■■□□□ 1.43
Scn1b-201ENSMUST00000098548 R3hdm2Q80TM6 1044 aaKnown RBP23.96■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Q8BGD0 127 aa23.96■■□□□ 1.43
Scn1b-201ENSMUST00000098548 GopcQ8BH60 463 aa23.96■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Rd3Q8BRE0 195 aa23.96■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Zmym6Q8BS54 1249 aa23.96■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Ftsj1Q8CBC7 324 aa23.96■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Tcf25Q8R3L2 676 aaKnown RBP23.96■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Xab2Q9DCD2 855 aaKnown RBP23.96■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Fgf22Q9ESS2 162 aa23.96■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Rnf14Q9JI90 485 aa23.96■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Nr3c1P06537 783 aa23.95■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Sox8Q04886 464 aa23.95■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Ndst1Q3UHN9 882 aa23.95■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Olfr389Q7TRX7 312 aa23.95■■□□□ 1.43
Scn1b-201ENSMUST00000098548 AdalQ80SY6 360 aa23.95■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Spata20Q80YT5 790 aa23.95■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Bpifb6Q8BU51 449 aa23.95■■□□□ 1.43
Scn1b-201ENSMUST00000098548 A430089I19RikQ8C9W1 407 aa23.95■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Leng8Q8CBY3 785 aaKnown RBP23.95■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Q922C1 641 aa23.95■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Stx17Q9D0I4 301 aa23.95■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Noxred1Q9D3S5 366 aa23.95■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Lonp2Q9DBN5 852 aa23.95■■□□□ 1.43
Scn1b-201ENSMUST00000098548 Gm27029A2A4P4 543 aa23.95■■□□□ 1.42
Scn1b-201ENSMUST00000098548 Fbf1A2A870 1173 aa23.95■■□□□ 1.42
Scn1b-201ENSMUST00000098548 Fgfr1P16092 822 aa23.95■■□□□ 1.42
Scn1b-201ENSMUST00000098548 Shmt1P50431 478 aa23.95■■□□□ 1.42
Scn1b-201ENSMUST00000098548 Slc12a1P55014 1095 aa23.95■■□□□ 1.42
Scn1b-201ENSMUST00000098548 Fermt1P59113 677 aa23.95■■□□□ 1.42
Scn1b-201ENSMUST00000098548 Atg9bQ6EBV9 922 aa23.95■■□□□ 1.42
Scn1b-201ENSMUST00000098548 Colgalt2Q6NVG7 625 aa23.95■■□□□ 1.42
Scn1b-201ENSMUST00000098548 SpopQ6ZWS8 374 aa23.95■■□□□ 1.42
Scn1b-201ENSMUST00000098548 Fam228aQ8CDW1 299 aa23.95■■□□□ 1.42
Scn1b-201ENSMUST00000098548 Dph5Q9CWQ0 281 aa23.95■■□□□ 1.42
Scn1b-201ENSMUST00000098548 Mrpl2Q9D773 306 aaKnown RBP23.95■■□□□ 1.42
Scn1b-201ENSMUST00000098548 PrelpQ9JK53 378 aa23.95■■□□□ 1.42
Scn1b-201ENSMUST00000098548 Ankrd2Q9WV06 328 aa23.95■■□□□ 1.42
Scn1b-201ENSMUST00000098548 Becn2P0DM65 447 aa23.94■■□□□ 1.42
Scn1b-201ENSMUST00000098548 Gnl1P36916 607 aa23.94■■□□□ 1.42
Scn1b-201ENSMUST00000098548 Brcc3P46737 291 aa23.94■■□□□ 1.42
Scn1b-201ENSMUST00000098548 Nrp1P97333 923 aa23.94■■□□□ 1.42
Scn1b-201ENSMUST00000098548 Hdhd2Q3UGR5 259 aa23.94■■□□□ 1.42
Scn1b-201ENSMUST00000098548 Ctnna2Q61301 953 aa23.94■■□□□ 1.42
Scn1b-201ENSMUST00000098548 Arhgap10Q6Y5D8 786 aa23.94■■□□□ 1.42
Scn1b-201ENSMUST00000098548 Apol9bQ8C7I4 310 aa23.94■■□□□ 1.42
Scn1b-201ENSMUST00000098548 Apol9aQ8VDU3 310 aa23.94■■□□□ 1.42
Scn1b-201ENSMUST00000098548 Tom1l1Q923U0 474 aa23.94■■□□□ 1.42
Scn1b-201ENSMUST00000098548 4930548H24RikQ9D496 437 aa23.94■■□□□ 1.42
Scn1b-201ENSMUST00000098548 Rap1gapA2ALS5 663 aa23.93■■□□□ 1.42
Scn1b-201ENSMUST00000098548 Cer1O55233 272 aa23.93■■□□□ 1.42
Scn1b-201ENSMUST00000098548 CraddO88843 199 aa23.93■■□□□ 1.42
Scn1b-201ENSMUST00000098548 B3gat3P58158 335 aa23.93■■□□□ 1.42
Scn1b-201ENSMUST00000098548 GaltQ03249 379 aa23.93■■□□□ 1.42
Scn1b-201ENSMUST00000098548 Ppp1r12cQ3UMT1 782 aa23.93■■□□□ 1.42
Scn1b-201ENSMUST00000098548 PighQ5M9N4 188 aa23.93■■□□□ 1.42
Scn1b-201ENSMUST00000098548 GmipQ6PGG2 971 aa23.93■■□□□ 1.42
Scn1b-201ENSMUST00000098548 PrcpQ7TMR0 491 aa23.93■■□□□ 1.42
Retrieved 100 of 22,080 RNA–protein pairs in 29.2 ms