RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Hps4Q99KG7 671 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Pou5f2Q9DAC9 329 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Akap8lQ9R0L7 642 aaKnown RBP9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Wdr19Q3UGF1 1341 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Gm4297D3YWB7 211 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Pgk2P09041 417 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 CebpaP53566 359 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Zfp560Q3URI6 754 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Gpd2Q64521 727 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Enpp3Q6DYE8 874 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Tarsl2Q8BLY2 790 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Scara5Q8K299 491 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Thoc1Q8R3N6 657 aaKnown RBP9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Pglyrp2Q8VCS0 530 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Akr1c21Q91WR5 323 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Tktl1Q99MX0 595 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Mad2l2Q9D752 211 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 TheglQ9DA15 459 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Htra1Q9R118 480 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 1700031F05RikB1AX30 191 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Zscan18E9PUD6 809 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Nccrp1G3X9C2 266 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 FechP22315 420 aaKnown RBP9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Dpp4P28843 760 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Krt80Q0VBK2 452 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Nsun2Q1HFZ0 757 aaKnown RBP9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Ube2j2Q6P073 259 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Fam120bQ6RI63 786 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Zfyve1Q810J8 777 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Bnc2Q8BMQ3 1127 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Q8K039 155 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Tmem221Q8K071 230 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Stoml2Q99JB2 353 aaKnown RBP9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 P33monoxQ9DBN4 303 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Abcb6Q9DC29 842 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 PgdQ9DCD0 483 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 ClpxQ9JHS4 634 aaKnown RBP9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Polg2Q9QZM2 459 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Pmm2Q9Z2M7 242 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 MntO08789 591 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Calm1P0DP26 149 aaKnown RBP9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Calm2P0DP27 149 aaKnown RBP9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Calm3P0DP28 149 aaKnown RBP9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Rab24P35290 203 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 TshrP47750 764 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 PtpaP58389 323 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 SpertQ32MG2 446 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Senp6Q6P7W0 1132 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 MffQ6PCP5 291 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Tnpo1Q8BFY9 898 aaKnown RBP9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Rnf151Q9CQ29 239 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Erp44Q9D1Q6 406 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Chic2Q9D9G3 165 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 ParvgQ9ERD8 331 aa9.34□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Zfp626A0A0U1RQ84 676 aa9.34□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Ankfn1A0A140LIW7 1083 aa9.34□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Cylc2B1AWN8 422 aa9.34□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Gm6576F6YTZ4 274 aa9.34□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Psmd3P14685 530 aa9.34□□□□□ -0.92
Clcn3-202ENSMUST00000056508 PparaP23204 468 aa9.34□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Ankmy2Q3TPE9 440 aa9.34□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Sec62Q8BU14 398 aaKnown RBP9.34□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Kiaa0391Q8JZY4 584 aaKnown RBP9.34□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Ablim1Q8K4G5 861 aa9.34□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Prpsap2Q8R574 369 aa9.34□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Pcdhgc5Q91XW9 944 aa9.34□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Sntg1Q925E1 517 aa9.34□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Haus8Q99L00 373 aa9.34□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Pdzk1Q9JIL4 519 aa9.34□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Plscr1Q9JJ00 328 aa9.34□□□□□ -0.92
Clcn3-202ENSMUST00000056508 NumbQ9QZS3 653 aa9.34□□□□□ -0.92
Clcn3-202ENSMUST00000056508 ChrdQ9Z0E2 948 aa9.34□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Fam71aB7XG49 585 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 LtkP08923 888 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Serpinh1P19324 417 aaKnown RBP9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Usp4P35123 962 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Arl1P61211 181 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Pkn1P70268 946 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Coq8aQ60936 645 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Cep78Q6IRU7 790 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Me3Q8BMF3 604 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Ints5Q8CHT3 1018 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 McamQ8R2Y2 648 aaKnown RBP9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Hyou1Q9JKR6 999 aaKnown RBP9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 ApipQ9WVQ5 241 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Il20rbE9Q9A6 308 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Nmt2O70311 529 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Pdlim1O70400 327 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 PkibQ04758 92 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Tmtc3Q8BRH0 920 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Zfp113Q8C689 439 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Epm2aip1Q8VEH5 606 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Q91WD4 421 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 WwoxQ91WL8 414 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Depdc7Q91WS7 511 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Pdxdc1Q99K01 787 aaKnown RBP9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Snx29Q9D3S3 818 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Tgm5Q9D7I9 724 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Ifi35Q9D8C4 286 aa9.33□□□□□ -0.92
Clcn3-202ENSMUST00000056508 Aldh6a1Q9EQ20 535 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms