RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Zfp51Q3U4L8 781 aa12.11□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 CtcfQ61164 736 aaKnown RBP12.11□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Pde1cQ64338 706 aa12.11□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 RbfaQ6P3B9 350 aa12.11□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Zfp251Q6PCX8 632 aa12.11□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 RragaQ80X95 313 aa12.11□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Aste1Q8BIR2 672 aa12.11□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Slc41a1Q8BJA2 512 aa12.11□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Q8BZJ8 459 aa12.11□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Sox30Q8CGW4 782 aa12.11□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Olfr805Q8VFI4 319 aa12.11□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Olfr1353Q8VGU8 309 aa12.11□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Fads1Q920L1 447 aa12.11□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Fam49bQ921M7 324 aa12.11□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Mrpl9Q99N94 265 aaKnown RBP12.11□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Pebp4Q9D9G2 242 aa12.11□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Ndst4Q9EQW8 872 aa12.11□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Abhd2Q9QXM0 425 aa12.11□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Smarcb1Q9Z0H3 385 aa12.11□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 2210011C24RikA0A087WQ89 206 aa12.1□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Ism1A2ATD1 454 aa12.1□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 4933406M09RikG3XA12 479 aa12.1□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Rab11fip2G3XA57 512 aa12.1□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Usp35M0QWN7 1009 aa12.1□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Odc1P00860 461 aa12.1□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Myl1P05977 188 aa12.1□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Serpinh1P19324 417 aaKnown RBP12.1□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Usp46P62069 366 aa12.1□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Grin2cQ01098 1239 aa12.1□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Gsdmc2Q2KHK6 480 aa12.1□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Fubp3Q3TIX6 575 aaKnown RBP12.1□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Gsdmc4Q3TR54 480 aa12.1□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Agxt2Q3UEG6 513 aa12.1□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Papd5Q68ED3 633 aaKnown RBP12.1□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Slc39a10Q6P5F6 833 aa12.1□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 DstykQ6XUX1 927 aa12.1□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Stk40Q7TNL3 435 aa12.1□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Trim65Q8BFW4 522 aa12.1□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Tmem169Q8BG50 297 aa12.1□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Gpr158Q8C419 1200 aa12.1□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Gsdmc3Q8CB12 480 aa12.1□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Fbxl13Q8CDU4 790 aa12.1□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Zmiz2Q8CIE2 920 aa12.1□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Pdlim2Q8R1G6 349 aa12.1□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Pcdhb18Q91Y02 792 aa12.1□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 1700123K08RikQ9D991 295 aa12.1□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Q9D9D9 101 aa12.1□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Eif2ak3Q9Z2B5 1114 aa12.1□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Gm5483B2RV77 97 aa12.09□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Gm10720D3Z1I5 223 aa12.09□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Pcsk6F6XJP7 959 aa12.09□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Cldn5O54942 218 aa12.09□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Trappc3O55013 180 aa12.09□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Men1O88559 611 aaKnown RBP12.09□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Hmga1P17095 107 aaKnown RBP12.09□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Fgf13P70377 245 aa12.09□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Ube2zQ3UE37 356 aa12.09□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 SlmapQ3URD3 845 aa12.09□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Fam196aQ3USH1 422 aa12.09□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Bbof1Q3V079 533 aa12.09□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Ift88Q61371 824 aa12.09□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 WtipQ7TQJ8 398 aa12.09□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Def6Q8C2K1 630 aa12.09□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Samd7Q8C8Y5 445 aa12.09□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Ace2Q8R0I0 805 aa12.09□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Pde6cQ91ZQ1 861 aa12.09□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Syt12Q920N7 421 aa12.09□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 CmasQ99KK2 432 aaKnown RBP12.09□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 MlklQ9D2Y4 472 aa12.09□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Rnf14Q9JI90 485 aa12.09□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Dnajb1Q9QYJ3 340 aaKnown RBP12.09□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Klra10Q9R1G6 266 aa12.09□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Rnf103Q9R1W3 683 aa12.09□□□□□ -0.47
Ccdc28b-201ENSMUST00000030586 Vwa8Q8CC88 1905 aa12.08□□□□□ -0.48
Ccdc28b-201ENSMUST00000030586 Gm5485A0A1D5RM98 91 aa12.08□□□□□ -0.48
Ccdc28b-201ENSMUST00000030586 Skint8A7XV07 398 aa12.08□□□□□ -0.48
Ccdc28b-201ENSMUST00000030586 Cyp2t4E9PWV0 503 aa12.08□□□□□ -0.48
Ccdc28b-201ENSMUST00000030586 Tnfrsf18O35714 228 aa12.08□□□□□ -0.48
Ccdc28b-201ENSMUST00000030586 Ctnnal1O88327 731 aa12.08□□□□□ -0.48
Ccdc28b-201ENSMUST00000030586 Aff1O88573 1216 aa12.08□□□□□ -0.48
Ccdc28b-201ENSMUST00000030586 Usp25P57080 1055 aa12.08□□□□□ -0.48
Ccdc28b-201ENSMUST00000030586 Sash1P59808 1230 aa12.08□□□□□ -0.48
Ccdc28b-201ENSMUST00000030586 Q3TQQ9 903 aa12.08□□□□□ -0.48
Ccdc28b-201ENSMUST00000030586 Srbd1Q497V5 1015 aaKnown RBP12.08□□□□□ -0.48
Ccdc28b-201ENSMUST00000030586 Olfr121Q5CZY0 321 aa12.08□□□□□ -0.48
Ccdc28b-201ENSMUST00000030586 Olfr8Q60892 310 aa12.08□□□□□ -0.48
Ccdc28b-201ENSMUST00000030586 Grik1Q60934 836 aa12.08□□□□□ -0.48
Ccdc28b-201ENSMUST00000030586 Bdkrb1Q61125 334 aa12.08□□□□□ -0.48
Ccdc28b-201ENSMUST00000030586 Kcnt1Q6ZPR4 1224 aa12.08□□□□□ -0.48
Ccdc28b-201ENSMUST00000030586 Prl3a1Q78Y73 227 aa12.08□□□□□ -0.48
Ccdc28b-201ENSMUST00000030586 Tas2r134Q7TQB0 298 aa12.08□□□□□ -0.48
Ccdc28b-201ENSMUST00000030586 R3hdm2Q80TM6 1044 aaKnown RBP12.08□□□□□ -0.48
Ccdc28b-201ENSMUST00000030586 Zbtb24Q80X44 710 aa12.08□□□□□ -0.48
Ccdc28b-201ENSMUST00000030586 D130040H23RikQ8BII3 405 aa12.08□□□□□ -0.48
Ccdc28b-201ENSMUST00000030586 Pum3Q8BKS9 647 aaKnown RBP12.08□□□□□ -0.48
Ccdc28b-201ENSMUST00000030586 Fbxo38Q8BMI0 1194 aa12.08□□□□□ -0.48
Ccdc28b-201ENSMUST00000030586 Ttc24Q8BYG0 334 aa12.08□□□□□ -0.48
Ccdc28b-201ENSMUST00000030586 Q8C4P0 716 aa12.08□□□□□ -0.48
Ccdc28b-201ENSMUST00000030586 Rcor2Q8C796 523 aa12.08□□□□□ -0.48
Ccdc28b-201ENSMUST00000030586 Spice1Q8C804 860 aa12.08□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms