RNA–Protein interactions for RNA: ENSMUST00000029480.8

Prpf38b-201, Transcript of Pre-mRNA-splicing factor 38B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf38b, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38b-201ENSMUST00000029480 Prkg1P0C605 671 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Mcpt4P21812 246 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Ptprn2P80560 1001 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Pih1d3Q3KNI6 218 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Odr4Q4PJX1 447 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 OgdhQ60597 1023 aaKnown RBP13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Sp4Q62445 782 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Fbxo10Q7TQF2 950 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Camta2Q80Y50 1208 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 B3glctQ8BHT6 489 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Sh2d5Q8JZW5 429 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Setd3Q91WC0 594 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Tpgs1Q99MS8 303 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Skor2A7M7C7 1008 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Clk2O35491 499 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 StrnO55106 780 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Cxcl9P18340 126 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Syt2P46097 422 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Acot6Q32Q92 419 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Ttc9Q3V038 219 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Spag6Q3V0U9 509 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Xlr3bQ6P205 226 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 SpopQ6ZWS8 374 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Tdpoz2Q717B2 364 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Zdhhc15Q8BGJ0 337 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Aste1Q8BIR2 672 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Champ1Q8K327 802 aaKnown RBP13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Dpp3Q99KK7 738 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Tuba8Q9JJZ2 449 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Sucla2Q9Z2I9 463 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Gm38392E9Q2A2 434 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Gm7995L7N2E4 160 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Casp8O89110 480 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 PrkchP23298 683 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 NsfP46460 744 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 MafP54843 370 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Wdr41Q3UDP0 460 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Nat8lQ3UGX3 299 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Gm5168Q4KL04 211 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Pih1h3bQ8C6P5 218 aa13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Noa1Q9JJG9 693 aaKnown RBP13.99□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Fam207aP58468 219 aaKnown RBP13.98□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Gbp1Q01514 589 aa13.98□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Larp7Q05CL8 570 aaKnown RBP13.98□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Rnf10Q3UIW5 804 aa13.98□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Ppp4r3cQ3V0Y1 813 aa13.98□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 PrkciQ62074 595 aaKnown RBP13.98□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Trnp1Q80ZI1 223 aa13.98□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Spag16Q8K450 639 aa13.98□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Emc2Q9CRD2 297 aa13.98□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Fam133bQ9CVI2 245 aaKnown RBP13.98□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 MtrexQ9CZU3 1040 aaKnown RBP13.98□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Batf3Q9D275 118 aa13.98□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 St6galnac1Q9QZ39 526 aa13.98□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Slc6a16A0A1L1SR47 742 aa13.98□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Tbc1d25A1A5B6 742 aa13.98□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Gm382B1AXN3 1250 aa13.98□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Pcdh9F8VPK8 1237 aa13.98□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Zfp607bG3X9H3 648 aa13.98□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 E2f6O54917 272 aa13.98□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Hoxc6P10629 235 aa13.98□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Fmr1P35922 614 aaKnown RBP13.98□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 NcstnP57716 708 aa13.98□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Adamts10P58459 1104 aa13.98□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Pcbp1P60335 356 aaKnown RBP13.98□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Gabrb2P63137 512 aa13.98□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Miga1Q4QQM5 600 aa13.98□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Nfe2l1Q61985 741 aa13.98□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Phc1Q64028 1012 aa13.98□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 NostrinQ6WKZ7 506 aa13.98□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Znf507Q6ZPY5 941 aa13.98□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Nrde2Q80XC6 1172 aa13.98□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 LzicQ8K3C3 190 aa13.98□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Il31raQ8K5B1 716 aa13.98□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 PdgfdQ925I7 370 aa13.98□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Spata31d1dE9Q5W2 1247 aa13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 F6Y6L6 278 aa13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Gm3182K7N6T8 263 aa13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 PrkceP16054 737 aa13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Art2aP17981 287 aa13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Actr2P61161 394 aa13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Vamp7P70280 220 aa13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 FAM120AQ6A0A9 1112 aaKnown RBP13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Chsy1Q6ZQ11 800 aa13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Gcfc2Q8BKT3 769 aa13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Upb1Q8VC97 393 aa13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Pcdha5Q91Y15 934 aa13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Pcdha3Q91Y16 942 aa13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Map4k3Q99JP0 894 aa13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 MlxiplQ99MZ3 864 aa13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Cntnap4Q99P47 1310 aa13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Ngly1Q9JI78 651 aa13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Znf354bQ9QXT9 601 aa13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Krt27Q9Z320 448 aa13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Gm6685D3YYP3 228 aa13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Atf2P16951 487 aaKnown RBP13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Lpar1P61793 364 aa13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Rad54lP70270 747 aa13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Grm2Q14BI2 872 aa13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Tex35Q14BK3 207 aa13.97□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms