RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Tspan18Q80WR1 248 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Rftn2Q8CHX7 500 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Setd6Q9CWY3 473 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Ltbp2O08999 1813 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 C2cd2E9Q3C1 696 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Gm6588E9Q3K0 461 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Trim80Q3V061 624 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Znf583Q3V080 568 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 CybbQ61093 570 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Dpysl3Q62188 570 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Ip6k2Q80V72 448 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Best2Q8BGM5 508 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Aste1Q8BIR2 672 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Elmo3Q8BYZ7 720 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Fbxl5Q8C2S5 690 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 4930449I24RikQ9D5E3 319 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 NesQ6P5H2 1864 aaKnown RBP8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Slc12a1P55014 1095 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Casp4P70343 373 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 9130409I23RikQ3TS87 320 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Gpr151Q7TSN6 422 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Trim62Q80V85 475 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Spata20Q80YT5 790 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Caskin2Q8VHK1 1201 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Rtfdc1Q99K95 307 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 MtrexQ9CZU3 1040 aaKnown RBP8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Xpo7Q9EPK7 1087 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Plekhg4A0A1L1SU27 1217 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Atp8b4A2ANX3 1194 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Atp2c2A7L9Z8 944 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 FancfE9Q5Z5 343 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Stmn2P55821 179 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Uchl4P58321 233 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 GsapQ3TCV3 858 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Slc20a2Q80UP8 656 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Heatr3Q8BQM4 679 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Fcho1Q8K285 873 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Lrrc14Q8VC16 493 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Ces1fQ91WU0 561 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Taf7lQ9D3R9 471 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Rassf7Q9DD19 359 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 LactbQ9EP89 551 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Homer2Q9QWW1 354 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Atp6v0a1Q9Z1G4 839 aaKnown RBP8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Kcnq2Q9Z351 759 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Gm27029A2A4P4 543 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Apol7bB1AQP7 369 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Kpna6O35345 536 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Vmn2r1O70410 912 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 PrkchP23298 683 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Igfbp4P47879 254 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Trim43cP86449 446 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Il6stQ00560 917 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Plk1Q07832 603 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Ppm1jQ149T7 507 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Apol7eQ3UZ24 369 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 HrQ61645 1182 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Baiap3Q80TT2 1134 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Fam118bQ8C569 351 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Btbd9Q8C726 612 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Tasp1Q8R1G1 420 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 FdpsQ920E5 353 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Pck1Q9Z2V4 622 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Efcab12V9GXH0 673 aa8.88□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Fgf15O35622 218 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 CfhP06909 1234 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Rufy4Q3TYX8 563 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Ino80dQ66JY2 873 aaKnown RBP8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Zswim6Q80TB7 1207 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 SnphQ80U23 495 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Pi4kbQ8BKC8 816 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Gtf3c4Q8BMQ2 817 aaKnown RBP8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 CarfQ8VHI4 689 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Dnajb7Q9QYI8 312 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Klrc2Q9WTJ9 238 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Gm3424L7N298 263 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Gm8246M0QWX9 263 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Il2rbP16297 539 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Sar1aP36536 198 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Gba2Q69ZF3 918 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 CcnyQ8BGU5 341 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Pak5Q8C015 719 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Zdhhc3Q8R173 299 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Map4k3Q99JP0 894 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Atp6v1e2Q9D593 226 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Rab27aQ9ERI2 221 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Cpsf3Q9QXK7 684 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Kank3Q9Z1P7 791 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Crlf3Q9Z2L7 442 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 StrnO55106 780 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Msh2P43247 935 aaKnown RBP8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 SftpbP50405 377 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Lig3P97386 1015 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Sult1d1Q3UZZ6 295 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 March4Q80TE3 409 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 AarsQ8BGQ7 968 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Cdkn2aipQ8BI72 563 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 SgczQ8BX51 311 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Brat1Q8C3R1 822 aa8.87□□□□□ -0.99
Sf3b1-201ENSMUST00000027127 Prpf39Q8K2Z2 665 aa8.87□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms