RNA–Protein interactions for RNA: YPL246C

RBD2, Transcript of Possible rhomboid protease, yeast

Gene RBD2, Length 789 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RBD2	YPL246C	HEM4	P06174	275 aa		4.68	□□□□□ -1.66
RBD2	YPL246C	RPS22A	P0C0W1	130 aa	Known RBP	4.68	□□□□□ -1.66
RBD2	YPL246C	YMR31	P19955	123 aa		4.68	□□□□□ -1.66
RBD2	YPL246C	YGL010W	P25338	174 aa		4.68	□□□□□ -1.66
RBD2	YPL246C	LDB16	P25587	256 aa		4.68	□□□□□ -1.66
RBD2	YPL246C	GPI2	P46961	280 aa		4.68	□□□□□ -1.66
RBD2	YPL246C	UBC13	P52490	153 aa		4.68	□□□□□ -1.66
RBD2	YPL246C	BOR1	P53838	576 aa		4.68	□□□□□ -1.66
RBD2	YPL246C	DAD3	P69850	94 aa		4.68	□□□□□ -1.66
RBD2	YPL246C	RPL21A	Q02753	160 aa	Known RBP	4.68	□□□□□ -1.66
RBD2	YPL246C	YPL067C	Q02754	198 aa		4.68	□□□□□ -1.66
RBD2	YPL246C	SHH3	Q04487	196 aa		4.68	□□□□□ -1.66
RBD2	YPL246C	YPS3	Q12303	508 aa		4.68	□□□□□ -1.66
RBD2	YPL246C	DCN1	Q12395	269 aa		4.68	□□□□□ -1.66
RBD2	YPL246C	ERG27	Q12452	347 aa	Known RBP	4.68	□□□□□ -1.66
RBD2	YPL246C	RPL21B	Q12672	160 aa	Known RBP	4.68	□□□□□ -1.66
RBD2	YPL246C	VPS63	O13549	108 aa		4.67	□□□□□ -1.66
RBD2	YPL246C	RPL9A	P05738	191 aa	Known RBP	4.67	□□□□□ -1.66
RBD2	YPL246C	SRP21	P32342	167 aa		4.67	□□□□□ -1.66
RBD2	YPL246C	SEC24	P40482	926 aa	Known RBP	4.67	□□□□□ -1.66
RBD2	YPL246C	LPP1	Q04396	274 aa		4.67	□□□□□ -1.66
RBD2	YPL246C	RPL39	P04650	51 aa		4.66	□□□□□ -1.66
RBD2	YPL246C	MRPL44	P19956	98 aa		4.66	□□□□□ -1.66
RBD2	YPL246C	RNA15	P25299	296 aa	Predicted RBP	4.66	□□□□□ -1.66
RBD2	YPL246C	RPS2	P25443	254 aa	Known RBP	4.66	□□□□□ -1.66
RBD2	YPL246C	SPS18	P32572	300 aa		4.66	□□□□□ -1.66
RBD2	YPL246C	CPR5	P35176	225 aa		4.66	□□□□□ -1.66
RBD2	YPL246C	PHD1	P36093	366 aa		4.66	□□□□□ -1.66
RBD2	YPL246C	YHR138C	P38841	114 aa	Predicted RBP	4.66	□□□□□ -1.66
RBD2	YPL246C	PIR5	P46999	287 aa		4.66	□□□□□ -1.66
RBD2	YPL246C	APS2	Q00381	147 aa		4.66	□□□□□ -1.66
RBD2	YPL246C	YMR166C	Q03829	368 aa		4.66	□□□□□ -1.66
RBD2	YPL246C	LIP2	Q06005	328 aa		4.66	□□□□□ -1.66
RBD2	YPL246C	MHR1	Q06630	226 aa		4.66	□□□□□ -1.66
RBD2	YPL246C	GEP5	Q12393	293 aa		4.66	□□□□□ -1.66
RBD2	YPL246C	YGL258W-A	Q3E740	77 aa		4.66	□□□□□ -1.66
RBD2	YPL246C	ILV5	P06168	395 aa	Known RBP	4.65	□□□□□ -1.67
RBD2	YPL246C	RPL35A	P0CX84	120 aa	Known RBP	4.65	□□□□□ -1.67
RBD2	YPL246C	RPL35B	P0CX85	120 aa	Known RBP	4.65	□□□□□ -1.67
RBD2	YPL246C	FUN14	P18411	198 aa		4.65	□□□□□ -1.67
RBD2	YPL246C	PAM17	P36147	197 aa		4.65	□□□□□ -1.67
RBD2	YPL246C	DAD2	P36162	133 aa		4.65	□□□□□ -1.67
RBD2	YPL246C	MRPL11	P36521	249 aa	Predicted RBP	4.65	□□□□□ -1.67
RBD2	YPL246C	CDC40	P40968	455 aa	Predicted RBP	4.65	□□□□□ -1.67
RBD2	YPL246C	MIC27	P50945	234 aa		4.65	□□□□□ -1.67
RBD2	YPL246C	MOT3	P54785	490 aa	Known RBP	4.65	□□□□□ -1.67
RBD2	YPL246C	POS5	Q06892	414 aa		4.65	□□□□□ -1.67
RBD2	YPL246C	PAA1	Q12447	191 aa	Known RBP	4.65	□□□□□ -1.67
RBD2	YPL246C	YCR024C-B	Q3E7Z8	88 aa		4.65	□□□□□ -1.67
RBD2	YPL246C	YOS1	Q3E834	85 aa		4.65	□□□□□ -1.67
RBD2	YPL246C	YMR105W-A	Q8TGS8	64 aa		4.65	□□□□□ -1.67
RBD2	YPL246C	HMX1	P32339	317 aa		4.64	□□□□□ -1.67
RBD2	YPL246C	IRC22	P40006	225 aa		4.64	□□□□□ -1.67
RBD2	YPL246C	CYB5	P40312	120 aa		4.64	□□□□□ -1.67
RBD2	YPL246C	HUA1	P40325	198 aa		4.64	□□□□□ -1.67
RBD2	YPL246C	AIM24	P47127	394 aa		4.64	□□□□□ -1.67
RBD2	YPL246C	RPL9B	P51401	191 aa	Known RBP	4.64	□□□□□ -1.67
RBD2	YPL246C	RPN14	P53196	417 aa		4.64	□□□□□ -1.67
RBD2	YPL246C	CPD1	P53314	239 aa		4.64	□□□□□ -1.67
RBD2	YPL246C	YNR071C	P53757	342 aa		4.64	□□□□□ -1.67
RBD2	YPL246C	IZH1	Q03419	316 aa		4.64	□□□□□ -1.67
RBD2	YPL246C	ATC1	Q04005	294 aa		4.64	□□□□□ -1.67
RBD2	YPL246C	COA6	Q3E846	104 aa		4.64	□□□□□ -1.67
RBD2	YPL246C	NOP1	P15646	327 aa	Known RBP	4.63	□□□□□ -1.67
RBD2	YPL246C	TOM40	P23644	387 aa	Known RBP	4.63	□□□□□ -1.67
RBD2	YPL246C	YPT10	P38146	199 aa		4.63	□□□□□ -1.67
RBD2	YPL246C	YAR068W	P39564	161 aa		4.63	□□□□□ -1.67
RBD2	YPL246C	YJL118W	P47022	219 aa		4.63	□□□□□ -1.67
RBD2	YPL246C	YGR018C	P53211	109 aa		4.63	□□□□□ -1.67
RBD2	YPL246C	STD1	Q02794	444 aa		4.63	□□□□□ -1.67
RBD2	YPL246C	YOR105W	Q08504	108 aa		4.63	□□□□□ -1.67
RBD2	YPL246C	ATX2	Q12067	313 aa		4.63	□□□□□ -1.67
RBD2	YPL246C	SMT3	Q12306	101 aa	Known RBP	4.63	□□□□□ -1.67
RBD2	YPL246C	YLR302C	O13544	120 aa		4.62	□□□□□ -1.67
RBD2	YPL246C	SOD1	P00445	154 aa	Known RBP	4.62	□□□□□ -1.67
RBD2	YPL246C	RPS23A	P0CX29	145 aa	Known RBP	4.62	□□□□□ -1.67
RBD2	YPL246C	RPS23B	P0CX30	145 aa		4.62	□□□□□ -1.67
RBD2	YPL246C	CUP2	P15315	225 aa		4.62	□□□□□ -1.67
RBD2	YPL246C	RPI1	P23250	407 aa	Known RBP	4.62	□□□□□ -1.67
RBD2	YPL246C	MIG1	P27705	504 aa		4.62	□□□□□ -1.67
RBD2	YPL246C	SUA7	P29055	345 aa	Predicted RBP	4.62	□□□□□ -1.67
RBD2	YPL246C	RAD23	P32628	398 aa	Known RBP	4.62	□□□□□ -1.67
RBD2	YPL246C	YER134C	P40081	178 aa		4.62	□□□□□ -1.67
RBD2	YPL246C	CRZ1	P53968	678 aa		4.62	□□□□□ -1.67
RBD2	YPL246C	SED1	Q01589	338 aa		4.62	□□□□□ -1.67
RBD2	YPL246C	PKR1	Q03880	122 aa	Known RBP	4.62	□□□□□ -1.67
RBD2	YPL246C	RAV2	Q03956	351 aa		4.62	□□□□□ -1.67
RBD2	YPL246C	PIS1	P06197	220 aa	Known RBP	4.61	□□□□□ -1.67
RBD2	YPL246C	YCR022C	P25620	114 aa		4.61	□□□□□ -1.67
RBD2	YPL246C	YKL075C	P36083	450 aa		4.61	□□□□□ -1.67
RBD2	YPL246C	MIX23	P38162	196 aa		4.61	□□□□□ -1.67
RBD2	YPL246C	YHL037C	P38733	133 aa		4.61	□□□□□ -1.67
RBD2	YPL246C	CTR2	P38865	189 aa		4.61	□□□□□ -1.67
RBD2	YPL246C	YJL028W	P47062	111 aa		4.61	□□□□□ -1.67
RBD2	YPL246C	TIM10	P87108	93 aa		4.61	□□□□□ -1.67
RBD2	YPL246C	TRI1	Q05024	226 aa		4.61	□□□□□ -1.67
RBD2	YPL246C	MCH1	Q07376	486 aa		4.61	□□□□□ -1.67
RBD2	YPL246C	FIT2	Q08906	153 aa		4.61	□□□□□ -1.67
RBD2	YPL246C	YCL001W-B	Q96VH2	84 aa		4.61	□□□□□ -1.67
RBD2	YPL246C	GCN1	P33892	2672 aa	Known RBP	4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 33.7 ms