RNA–Protein interactions for RNA: YOR078W

BUD21, Transcript of Component of small ribosomal subunit (SSU) processosome, yeastyeast

Gene BUD21, Length 645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD21YOR078W ZRT1P32804 376 aa2.6□□□□□ -1.99
BUD21YOR078W YKL071WP36086 256 aa2.6□□□□□ -1.99
BUD21YOR078W RPL14AP36105 138 aaKnown RBP2.6□□□□□ -1.99
BUD21YOR078W VID24P38263 362 aa2.6□□□□□ -1.99
BUD21YOR078W FYV4P38783 130 aaPredicted RBP2.6□□□□□ -1.99
BUD21YOR078W PSD1P39006 500 aa2.6□□□□□ -1.99
BUD21YOR078W YER134CP40081 178 aa2.6□□□□□ -1.99
BUD21YOR078W HAC1P41546 238 aa2.6□□□□□ -1.99
BUD21YOR078W SFH5P47008 294 aa2.6□□□□□ -1.99
BUD21YOR078W BAT2P47176 376 aaKnown RBP2.6□□□□□ -1.99
BUD21YOR078W YGL235WP53071 178 aa2.6□□□□□ -1.99
BUD21YOR078W INP1Q03694 420 aa2.6□□□□□ -1.99
BUD21YOR078W FSH2Q05015 223 aa2.6□□□□□ -1.99
BUD21YOR078W CDD1Q06549 142 aa2.6□□□□□ -1.99
BUD21YOR078W PRM3Q08931 133 aa2.6□□□□□ -1.99
BUD21YOR078W ODC2Q99297 307 aa2.6□□□□□ -1.99
BUD21YOR078W FIG2P25653 1609 aa2.6□□□□□ -1.99
BUD21YOR078W SLH1P53327 1967 aaKnown RBP2.6□□□□□ -1.99
BUD21YOR078W HKR1P41809 1802 aa2.59□□□□□ -1.99
BUD21YOR078W FMP49A0A023PZB3 126 aa2.59□□□□□ -1.99
BUD21YOR078W COX5AP00424 153 aa2.59□□□□□ -1.99
BUD21YOR078W YAR066WP0CX18 203 aa2.59□□□□□ -1.99
BUD21YOR078W YHR214WP0CX19 203 aa2.59□□□□□ -1.99
BUD21YOR078W DPM1P14020 267 aaKnown RBP2.59□□□□□ -1.99
BUD21YOR078W SCO1P23833 295 aa2.59□□□□□ -1.99
BUD21YOR078W ADK2P26364 225 aa2.59□□□□□ -1.99
BUD21YOR078W YKR070WP36151 352 aaKnown RBP2.59□□□□□ -1.99
BUD21YOR078W TEM1P38987 245 aa2.59□□□□□ -1.99
BUD21YOR078W ACA1P39970 489 aa2.59□□□□□ -1.99
BUD21YOR078W TIF34P40217 347 aaKnown RBP2.59□□□□□ -1.99
BUD21YOR078W GRH1Q04410 372 aaKnown RBP2.59□□□□□ -1.99
BUD21YOR078W GRX8Q05926 109 aa2.59□□□□□ -1.99
BUD21YOR078W NMA1Q06178 401 aaKnown RBP2.59□□□□□ -1.99
BUD21YOR078W YRA1Q12159 226 aaKnown RBP2.59□□□□□ -1.99
BUD21YOR078W PEX11Q12462 236 aa2.59□□□□□ -1.99
BUD21YOR078W YPR096CO13587 100 aa2.58□□□□□ -2
BUD21YOR078W HEM4P06174 275 aa2.58□□□□□ -2
BUD21YOR078W STE7P06784 515 aa2.58□□□□□ -2
BUD21YOR078W RPS28BP0C0X0 67 aaKnown RBP2.58□□□□□ -2
BUD21YOR078W SEC11P15367 167 aa2.58□□□□□ -2
BUD21YOR078W MKK1P32490 508 aa2.58□□□□□ -2
BUD21YOR078W SPS18P32572 300 aa2.58□□□□□ -2
BUD21YOR078W MIC12P38341 106 aa2.58□□□□□ -2
BUD21YOR078W UME6P39001 836 aa2.58□□□□□ -2
BUD21YOR078W ERG28P40030 148 aa2.58□□□□□ -2
BUD21YOR078W YER076CP40049 302 aa2.58□□□□□ -2
BUD21YOR078W YIL059CP40520 121 aa2.58□□□□□ -2
BUD21YOR078W OST2P46964 130 aa2.58□□□□□ -2
BUD21YOR078W YJL028WP47062 111 aa2.58□□□□□ -2
BUD21YOR078W MIC27P50945 234 aa2.58□□□□□ -2
BUD21YOR078W YNR048WP53740 393 aa2.58□□□□□ -2
BUD21YOR078W ABF2Q02486 183 aa2.58□□□□□ -2
BUD21YOR078W RPL21AQ02753 160 aaKnown RBP2.58□□□□□ -2
BUD21YOR078W AIM34Q03673 198 aa2.58□□□□□ -2
BUD21YOR078W RIM9Q04734 239 aa2.58□□□□□ -2
BUD21YOR078W YMR310CQ04867 317 aaPredicted RBP2.58□□□□□ -2
BUD21YOR078W SYM1Q06563 197 aa2.58□□□□□ -2
BUD21YOR078W COX17Q12287 69 aa2.58□□□□□ -2
BUD21YOR078W MRPL23Q12487 163 aaPredicted RBP2.58□□□□□ -2
BUD21YOR078W RPL21BQ12672 160 aaKnown RBP2.58□□□□□ -2
BUD21YOR078W RPS28AQ3E7X9 67 aaPredicted RBP2.58□□□□□ -2
BUD21YOR078W MRS1P07266 363 aa2.57□□□□□ -2
BUD21YOR078W YER039C-AP0CD97 72 aa2.57□□□□□ -2
BUD21YOR078W YOL162WP0CF19 215 aa2.57□□□□□ -2
BUD21YOR078W HMRA1P0CY11 126 aa2.57□□□□□ -2
BUD21YOR078W CUP2P15315 225 aa2.57□□□□□ -2
BUD21YOR078W COX10P21592 462 aa2.57□□□□□ -2
BUD21YOR078W MRPL20P22354 195 aaPredicted RBP2.57□□□□□ -2
BUD21YOR078W ERG8P24521 451 aa2.57□□□□□ -2
BUD21YOR078W SRP21P32342 167 aa2.57□□□□□ -2
BUD21YOR078W YBL059WP34224 193 aa2.57□□□□□ -2
BUD21YOR078W GPX1P36014 167 aa2.57□□□□□ -2
BUD21YOR078W YBR090CP38253 122 aa2.57□□□□□ -2
BUD21YOR078W YGP1P38616 354 aaKnown RBP2.57□□□□□ -2
BUD21YOR078W YNR064CP53750 290 aa2.57□□□□□ -2
BUD21YOR078W BUD25P85052 153 aa2.57□□□□□ -2
BUD21YOR078W RAV2Q03956 351 aa2.57□□□□□ -2
BUD21YOR078W NAT3Q06504 195 aa2.57□□□□□ -2
BUD21YOR078W YOR105WQ08504 108 aa2.57□□□□□ -2
BUD21YOR078W YOR376WQ08900 122 aa2.57□□□□□ -2
BUD21YOR078W USB1Q12208 290 aaKnown RBP2.57□□□□□ -2
BUD21YOR078W UTP23Q12339 254 aaKnown RBP2.57□□□□□ -2
BUD21YOR078W ATO3Q12359 275 aa2.57□□□□□ -2
BUD21YOR078W RPS22BQ3E7Y3 130 aaKnown RBP2.57□□□□□ -2
BUD21YOR078W SCS22Q6Q595 175 aa2.57□□□□□ -2
BUD21YOR078W ATG40Q99325 256 aa2.57□□□□□ -2
BUD21YOR078W UBA3Q99344 299 aa2.57□□□□□ -2
BUD21YOR078W STE18P18852 110 aa2.56□□□□□ -2
BUD21YOR078W SPO13P23624 291 aa2.56□□□□□ -2
BUD21YOR078W NHP2P32495 156 aaPredicted RBP2.56□□□□□ -2
BUD21YOR078W SGE1P33335 543 aa2.56□□□□□ -2
BUD21YOR078W PAD1P33751 242 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
BUD21YOR078W YKL070WP36087 169 aa2.56□□□□□ -2
BUD21YOR078W SWD2P36104 329 aaPredicted RBP2.56□□□□□ -2
BUD21YOR078W PHO88P38264 188 aaPredicted RBP2.56□□□□□ -2
BUD21YOR078W INM1P38710 295 aa2.56□□□□□ -2
BUD21YOR078W BTT1P40314 149 aaPredicted RBP2.56□□□□□ -2
BUD21YOR078W IST3P40565 148 aaPredicted RBP2.56□□□□□ -2
BUD21YOR078W YFR045WP43617 309 aa2.56□□□□□ -2
BUD21YOR078W ARP3P47117 449 aaKnown RBP2.56□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms