RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A AME1P38313 324 aa2.22□□□□□ -2.05
YSF3YNL138W-A BMT5P40493 336 aa2.22□□□□□ -2.05
YSF3YNL138W-A LSM1P47017 172 aaKnown RBP2.22□□□□□ -2.05
YSF3YNL138W-A NIF3P53081 288 aa2.22□□□□□ -2.05
YSF3YNL138W-A TOS8P53147 276 aa2.22□□□□□ -2.05
YSF3YNL138W-A SLX9P53251 210 aaPredicted RBP2.22□□□□□ -2.05
YSF3YNL138W-A SPC2Q04969 178 aa2.22□□□□□ -2.05
YSF3YNL138W-A RNH202Q05635 350 aa2.22□□□□□ -2.05
YSF3YNL138W-A YNG1Q08465 219 aa2.22□□□□□ -2.05
YSF3YNL138W-A YOL162WP0CF19 215 aa2.21□□□□□ -2.06
YSF3YNL138W-A STF2P16965 84 aa2.21□□□□□ -2.06
YSF3YNL138W-A SRP102P36057 244 aaPredicted RBP2.21□□□□□ -2.06
YSF3YNL138W-A SKG1P36169 355 aa2.21□□□□□ -2.06
YSF3YNL138W-A MPC2P38857 129 aa2.21□□□□□ -2.06
YSF3YNL138W-A SRP14P38985 146 aa2.21□□□□□ -2.06
YSF3YNL138W-A OST3P48439 350 aa2.21□□□□□ -2.06
YSF3YNL138W-A HHT1P61830 136 aa2.21□□□□□ -2.06
YSF3YNL138W-A YPL067CQ02754 198 aa2.21□□□□□ -2.06
YSF3YNL138W-A AIM36Q03798 255 aa2.21□□□□□ -2.06
YSF3YNL138W-A NNT1Q05874 261 aa2.21□□□□□ -2.06
YSF3YNL138W-A BBP1Q12365 385 aa2.21□□□□□ -2.06
YSF3YNL138W-A GRX2P17695 143 aaKnown RBP2.2□□□□□ -2.06
YSF3YNL138W-A MBA1P38300 278 aa2.2□□□□□ -2.06
YSF3YNL138W-A BAT2P47176 376 aaKnown RBP2.2□□□□□ -2.06
YSF3YNL138W-A MMS2P53152 137 aa2.2□□□□□ -2.06
YSF3YNL138W-A YIP3P53633 176 aa2.2□□□□□ -2.06
YSF3YNL138W-A PDR17P53844 350 aa2.2□□□□□ -2.06
YSF3YNL138W-A RFU1Q08003 200 aa2.2□□□□□ -2.06
YSF3YNL138W-A NSL1Q12143 216 aa2.2□□□□□ -2.06
YSF3YNL138W-A NOT5Q12514 560 aaPredicted RBP2.2□□□□□ -2.06
YSF3YNL138W-A YDL085C-AQ3E7B7 68 aaKnown RBP2.2□□□□□ -2.06
YSF3YNL138W-A CCA1P21269 546 aa2.19□□□□□ -2.06
YSF3YNL138W-A MRS4P23500 304 aa2.19□□□□□ -2.06
YSF3YNL138W-A NUF2P33895 451 aa2.19□□□□□ -2.06
YSF3YNL138W-A TMA19P35691 167 aaKnown RBP2.19□□□□□ -2.06
YSF3YNL138W-A MRPL28P36527 147 aa2.19□□□□□ -2.06
YSF3YNL138W-A YBL081WP38180 368 aaKnown RBP2.19□□□□□ -2.06
YSF3YNL138W-A POP8P38208 133 aa2.19□□□□□ -2.06
YSF3YNL138W-A GOS1P38736 223 aa2.19□□□□□ -2.06
YSF3YNL138W-A SYS1P41544 203 aa2.19□□□□□ -2.06
YSF3YNL138W-A YGL088WP53151 121 aa2.19□□□□□ -2.06
YSF3YNL138W-A JAC1P53193 184 aa2.19□□□□□ -2.06
YSF3YNL138W-A SPC3Q12133 184 aa2.19□□□□□ -2.06
YSF3YNL138W-A YLR050CQ12155 161 aaKnown RBP2.19□□□□□ -2.06
YSF3YNL138W-A YLR126CQ12288 251 aa2.19□□□□□ -2.06
YSF3YNL138W-A MHF2Q3E829 80 aa2.19□□□□□ -2.06
YSF3YNL138W-A TAR1Q8TGM6 124 aa2.19□□□□□ -2.06
YSF3YNL138W-A RPL30P14120 105 aaKnown RBP2.18□□□□□ -2.06
YSF3YNL138W-A AVT6P40074 448 aa2.18□□□□□ -2.06
YSF3YNL138W-A ILM1P47155 203 aa2.18□□□□□ -2.06
YSF3YNL138W-A MRH4P53166 561 aa2.18□□□□□ -2.06
YSF3YNL138W-A SWT21P53873 357 aaPredicted RBP2.18□□□□□ -2.06
YSF3YNL138W-A NRK1P53915 240 aa2.18□□□□□ -2.06
YSF3YNL138W-A DID2P69771 204 aa2.18□□□□□ -2.06
YSF3YNL138W-A ABF2Q02486 183 aa2.18□□□□□ -2.06
YSF3YNL138W-A GGA1Q06336 557 aa2.18□□□□□ -2.06
YSF3YNL138W-A MPD1Q12404 318 aaKnown RBP2.18□□□□□ -2.06
YSF3YNL138W-A LSO2Q3E772 92 aaKnown RBP2.18□□□□□ -2.06
YSF3YNL138W-A PUT1P09368 476 aa2.17□□□□□ -2.06
YSF3YNL138W-A GCN3P14741 305 aa2.17□□□□□ -2.06
YSF3YNL138W-A KRE1P17260 313 aa2.17□□□□□ -2.06
YSF3YNL138W-A ATG22P25568 528 aa2.17□□□□□ -2.06
YSF3YNL138W-A PDS1P40316 373 aaPredicted RBP2.17□□□□□ -2.06
YSF3YNL138W-A TIR3P40552 269 aa2.17□□□□□ -2.06
YSF3YNL138W-A FAR7P43592 221 aa2.17□□□□□ -2.06
YSF3YNL138W-A MOG1P47123 218 aa2.17□□□□□ -2.06
YSF3YNL138W-A FMP41P53889 259 aaKnown RBP2.17□□□□□ -2.06
YSF3YNL138W-A AAH1P53909 347 aa2.17□□□□□ -2.06
YSF3YNL138W-A SNO1Q03144 224 aa2.17□□□□□ -2.06
YSF3YNL138W-A PLP1Q04004 230 aa2.17□□□□□ -2.06
YSF3YNL138W-A LCL2Q08045 131 aa2.17□□□□□ -2.06
YSF3YNL138W-A AGC1Q12482 902 aa2.17□□□□□ -2.06
YSF3YNL138W-A RIB3Q99258 208 aa2.17□□□□□ -2.06
YSF3YNL138W-A DPM1P14020 267 aaKnown RBP2.16□□□□□ -2.06
YSF3YNL138W-A PHO80P20052 293 aa2.16□□□□□ -2.06
YSF3YNL138W-A ERG2P32352 222 aa2.16□□□□□ -2.06
YSF3YNL138W-A FMP23P38231 175 aa2.16□□□□□ -2.06
YSF3YNL138W-A DER1P38307 211 aa2.16□□□□□ -2.06
YSF3YNL138W-A SSH1P38353 490 aaKnown RBP2.16□□□□□ -2.06
YSF3YNL138W-A YER137CP40083 148 aaKnown RBP2.16□□□□□ -2.06
YSF3YNL138W-A MPM1P40364 252 aa2.16□□□□□ -2.06
YSF3YNL138W-A TTI2P47168 421 aa2.16□□□□□ -2.06
YSF3YNL138W-A BXI1P48558 297 aa2.16□□□□□ -2.06
YSF3YNL138W-A MIG2P53035 382 aa2.16□□□□□ -2.06
YSF3YNL138W-A ALG13P53178 202 aa2.16□□□□□ -2.06
YSF3YNL138W-A COX12Q01519 83 aa2.16□□□□□ -2.06
YSF3YNL138W-A YKR005CQ02203 525 aa2.16□□□□□ -2.06
YSF3YNL138W-A YOR186WQ08560 144 aa2.16□□□□□ -2.06
YSF3YNL138W-A YEL009C-AA0A023PZF2 135 aa2.15□□□□□ -2.07
YSF3YNL138W-A CDC8P00572 216 aa2.15□□□□□ -2.07
YSF3YNL138W-A HYM1P32464 399 aa2.15□□□□□ -2.07
YSF3YNL138W-A YBR032WP38223 100 aa2.15□□□□□ -2.07
YSF3YNL138W-A YGR042WP53227 271 aa2.15□□□□□ -2.07
YSF3YNL138W-A YMR315WQ04869 349 aaKnown RBP2.15□□□□□ -2.07
YSF3YNL138W-A NOC4Q06512 552 aaPredicted RBP2.15□□□□□ -2.07
YSF3YNL138W-A PRR2Q12310 699 aa2.15□□□□□ -2.07
YSF3YNL138W-A REP2P03872 296 aa2.14□□□□□ -2.07
YSF3YNL138W-A APS1P35181 156 aa2.14□□□□□ -2.07
YSF3YNL138W-A YKE4P40544 346 aa2.14□□□□□ -2.07
YSF3YNL138W-A YGL101WP53144 215 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 111.9 ms