RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	ATG5	Q12380	294 aa		2.82	□□□□□ -1.96
TPM1	YNL079C	DGK1	Q12382	290 aa		2.82	□□□□□ -1.96
TPM1	YNL079C	AGC1	Q12482	902 aa		2.82	□□□□□ -1.96
TPM1	YNL079C	COX19	Q3E731	98 aa		2.82	□□□□□ -1.96
TPM1	YNL079C	YDR157W	A0A023PZE8	133 aa		2.81	□□□□□ -1.96
TPM1	YNL079C	RPS23A	P0CX29	145 aa	Known RBP	2.81	□□□□□ -1.96
TPM1	YNL079C	RPS23B	P0CX30	145 aa		2.81	□□□□□ -1.96
TPM1	YNL079C	YCR025C	P25352	136 aa		2.81	□□□□□ -1.96
TPM1	YNL079C	UPS2	P35200	230 aa		2.81	□□□□□ -1.96
TPM1	YNL079C	PRS3	P38689	320 aa	Known RBP	2.81	□□□□□ -1.96
TPM1	YNL079C	YHL037C	P38733	133 aa		2.81	□□□□□ -1.96
TPM1	YNL079C	RMD6	P39975	231 aa		2.81	□□□□□ -1.96
TPM1	YNL079C	YFL051C	P43552	160 aa		2.81	□□□□□ -1.96
TPM1	YNL079C	GON7	P46984	123 aa		2.81	□□□□□ -1.96
TPM1	YNL079C	XPT1	P47165	209 aa		2.81	□□□□□ -1.96
TPM1	YNL079C	PDR17	P53844	350 aa		2.81	□□□□□ -1.96
TPM1	YNL079C	SUR7	P54003	302 aa		2.81	□□□□□ -1.96
TPM1	YNL079C	SNO1	Q03144	224 aa		2.81	□□□□□ -1.96
TPM1	YNL079C	YLR179C	Q06252	201 aa	Known RBP	2.81	□□□□□ -1.96
TPM1	YNL079C	YPD1	Q07688	167 aa		2.81	□□□□□ -1.96
TPM1	YNL079C	HRD1	Q08109	551 aa		2.81	□□□□□ -1.96
TPM1	YNL079C	YOR015W	Q12169	119 aa		2.81	□□□□□ -1.96
TPM1	YNL079C	PRR2	Q12310	699 aa		2.81	□□□□□ -1.96
TPM1	YNL079C	BOL1	Q3E793	110 aa		2.81	□□□□□ -1.96
TPM1	YNL079C	IPP1	P00817	287 aa	Known RBP	2.8	□□□□□ -1.96
TPM1	YNL079C	ROX3	P25046	220 aa		2.8	□□□□□ -1.96
TPM1	YNL079C	RPL16A	P26784	199 aa	Known RBP	2.8	□□□□□ -1.96
TPM1	YNL079C	IES6	P32617	166 aa		2.8	□□□□□ -1.96
TPM1	YNL079C	CPR5	P35176	225 aa		2.8	□□□□□ -1.96
TPM1	YNL079C	YBR220C	P38318	560 aa		2.8	□□□□□ -1.96
TPM1	YNL079C	CUE1	P38428	203 aa		2.8	□□□□□ -1.96
TPM1	YNL079C	YHR138C	P38841	114 aa	Predicted RBP	2.8	□□□□□ -1.96
TPM1	YNL079C	PGD1	P40356	397 aa		2.8	□□□□□ -1.96
TPM1	YNL079C	ARP3	P47117	449 aa	Known RBP	2.8	□□□□□ -1.96
TPM1	YNL079C	GEP7	P53171	287 aa		2.8	□□□□□ -1.96
TPM1	YNL079C	YGR050C	P53231	118 aa		2.8	□□□□□ -1.96
TPM1	YNL079C	YDR114C	Q04597	100 aa		2.8	□□□□□ -1.96
TPM1	YNL079C	YMR253C	Q04835	414 aa		2.8	□□□□□ -1.96
TPM1	YNL079C	MSC3	Q05812	728 aa		2.8	□□□□□ -1.96
TPM1	YNL079C	ZEO1	Q08245	113 aa		2.8	□□□□□ -1.96
TPM1	YNL079C	RFM1	Q12192	310 aa		2.8	□□□□□ -1.96
TPM1	YNL079C	ACC1	Q00955	2233 aa	Known RBP	2.8	□□□□□ -1.96
TPM1	YNL079C	BLM10	P43583	2143 aa		2.8	□□□□□ -1.96
TPM1	YNL079C	SEC16	P48415	2195 aa	Known RBP	2.79	□□□□□ -1.96
TPM1	YNL079C	VPS63	O13549	108 aa		2.79	□□□□□ -1.96
TPM1	YNL079C	YMR31	P19955	123 aa		2.79	□□□□□ -1.96
TPM1	YNL079C	SPO13	P23624	291 aa		2.79	□□□□□ -1.96
TPM1	YNL079C	AHT1	P29589	182 aa		2.79	□□□□□ -1.96
TPM1	YNL079C	ATG8	P38182	117 aa	RIP-Chip data	2.79	□□□□□ -1.96	not detected
TPM1	YNL079C	GPI18	P38211	433 aa		2.79	□□□□□ -1.96
TPM1	YNL079C	COX15	P40086	486 aa		2.79	□□□□□ -1.96
TPM1	YNL079C	SMD3	P43321	101 aa	Known RBP	2.79	□□□□□ -1.96
TPM1	YNL079C	IGD1	P43598	195 aa		2.79	□□□□□ -1.96
TPM1	YNL079C	MOG1	P47123	218 aa		2.79	□□□□□ -1.96
TPM1	YNL079C	TTI2	P47168	421 aa		2.79	□□□□□ -1.96
TPM1	YNL079C	YGL262W	P53054	175 aa		2.79	□□□□□ -1.96
TPM1	YNL079C	PAU4	P53427	120 aa		2.79	□□□□□ -1.96
TPM1	YNL079C	HCH1	P53834	153 aa		2.79	□□□□□ -1.96
TPM1	YNL079C	RPL21A	Q02753	160 aa	Known RBP	2.79	□□□□□ -1.96
TPM1	YNL079C	LPP1	Q04396	274 aa		2.79	□□□□□ -1.96
TPM1	YNL079C	ECM18	Q04623	453 aa		2.79	□□□□□ -1.96
TPM1	YNL079C	FSH2	Q05015	223 aa		2.79	□□□□□ -1.96
TPM1	YNL079C	RPL21B	Q12672	160 aa	Known RBP	2.79	□□□□□ -1.96
TPM1	YNL079C	YPR145C-A	Q2V2P0	78 aa		2.79	□□□□□ -1.96
TPM1	YNL079C	RPL39	P04650	51 aa		2.78	□□□□□ -1.96
TPM1	YNL079C	RPL9A	P05738	191 aa	Known RBP	2.78	□□□□□ -1.96
TPM1	YNL079C	ADH3	P07246	375 aa	Known RBP	2.78	□□□□□ -1.96
TPM1	YNL079C	RPL23A	P0CX41	137 aa	Known RBP	2.78	□□□□□ -1.96
TPM1	YNL079C	RPL23B	P0CX42	137 aa	Known RBP	2.78	□□□□□ -1.96
TPM1	YNL079C	URA5	P13298	226 aa	Known RBP	2.78	□□□□□ -1.96
TPM1	YNL079C	FCY2	P17064	533 aa		2.78	□□□□□ -1.96
TPM1	YNL079C	SEC59	P20048	519 aa		2.78	□□□□□ -1.96
TPM1	YNL079C	QCR9	P22289	66 aa		2.78	□□□□□ -1.96
TPM1	YNL079C	HMX1	P32339	317 aa		2.78	□□□□□ -1.96
TPM1	YNL079C	RPL14A	P36105	138 aa	Known RBP	2.78	□□□□□ -1.96
TPM1	YNL079C	SHB17	P36136	271 aa	Known RBP	2.78	□□□□□ -1.96
TPM1	YNL079C	RPL14B	P38754	138 aa	Known RBP	2.78	□□□□□ -1.96
TPM1	YNL079C	RTC3	P38804	111 aa	Predicted RBP	2.78	□□□□□ -1.96
TPM1	YNL079C	YGR269W	P40326	108 aa		2.78	□□□□□ -1.96
TPM1	YNL079C	GTT1	P40582	234 aa		2.78	□□□□□ -1.96
TPM1	YNL079C	PHS1	P40857	217 aa		2.78	□□□□□ -1.96
TPM1	YNL079C	VMA21	P41806	77 aa		2.78	□□□□□ -1.96
TPM1	YNL079C	PIR5	P46999	287 aa		2.78	□□□□□ -1.96
TPM1	YNL079C	RPL9B	P51401	191 aa	Known RBP	2.78	□□□□□ -1.96
TPM1	YNL079C	YPS5	P53057	165 aa		2.78	□□□□□ -1.96
TPM1	YNL079C	TIM21	P53220	239 aa		2.78	□□□□□ -1.96
TPM1	YNL079C	SED1	Q01589	338 aa		2.78	□□□□□ -1.96
TPM1	YNL079C	PML1	Q07930	204 aa	Predicted RBP	2.78	□□□□□ -1.96
TPM1	YNL079C	YPS3	Q12303	508 aa		2.78	□□□□□ -1.96
TPM1	YNL079C	SME1	Q12330	94 aa	Predicted RBP	2.78	□□□□□ -1.96
TPM1	YNL079C	YMR105W-A	Q8TGS8	64 aa		2.78	□□□□□ -1.96
TPM1	YNL079C	SEN1	Q00416	2231 aa	Known RBP	2.77	□□□□□ -1.97
TPM1	YNL079C	RPS25B	P0C0T4	108 aa	Known RBP	2.77	□□□□□ -1.97
TPM1	YNL079C	PAU1	P0CE88	120 aa		2.77	□□□□□ -1.97
TPM1	YNL079C	PAU14	P0CE89	120 aa		2.77	□□□□□ -1.97
TPM1	YNL079C	PAU6	P0CE90	120 aa		2.77	□□□□□ -1.97
TPM1	YNL079C	PAU18	P0CE91	120 aa		2.77	□□□□□ -1.97
TPM1	YNL079C	PAU8	P0CE92	120 aa		2.77	□□□□□ -1.97
TPM1	YNL079C	PAU11	P0CE93	120 aa		2.77	□□□□□ -1.97
TPM1	YNL079C	DAL80	P26343	269 aa		2.77	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 53.7 ms