RNA–Protein interactions for RNA: YNL054W-A

YNL054W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YNL054W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YNL054W-AYNL054W-A PET54P10834 293 aa2.48□□□□□ -2.01
YNL054W-AYNL054W-A SRP102P36057 244 aaPredicted RBP2.48□□□□□ -2.01
YNL054W-AYNL054W-A RIO2P40160 425 aaKnown RBP2.48□□□□□ -2.01
YNL054W-AYNL054W-A ALB1P47019 175 aaPredicted RBP2.48□□□□□ -2.01
YNL054W-AYNL054W-A YAE1P47118 141 aaPredicted RBP2.48□□□□□ -2.01
YNL054W-AYNL054W-A RRP17Q04031 235 aaPredicted RBP2.48□□□□□ -2.01
YNL054W-AYNL054W-A ATG41Q12048 136 aa2.48□□□□□ -2.01
YNL054W-AYNL054W-A MAK31P23059 88 aa2.47□□□□□ -2.01
YNL054W-AYNL054W-A PTC1P35182 281 aa2.47□□□□□ -2.01
YNL054W-AYNL054W-A TRM3Q07527 1436 aa2.47□□□□□ -2.01
YNL054W-AYNL054W-A YLR422WQ06409 1932 aa2.47□□□□□ -2.01
YNL054W-AYNL054W-A YOL162WP0CF19 215 aa2.46□□□□□ -2.02
YNL054W-AYNL054W-A RPB7P34087 171 aa2.46□□□□□ -2.02
YNL054W-AYNL054W-A IPI1P38803 334 aaPredicted RBP2.46□□□□□ -2.02
YNL054W-AYNL054W-A YER181CP40097 107 aa2.46□□□□□ -2.02
YNL054W-AYNL054W-A CCC1P47818 322 aa2.46□□□□□ -2.02
YNL054W-AYNL054W-A HHT1P61830 136 aa2.46□□□□□ -2.02
YNL054W-AYNL054W-A GRX5Q02784 150 aa2.46□□□□□ -2.02
YNL054W-AYNL054W-A QCR8P08525 94 aa2.45□□□□□ -2.02
YNL054W-AYNL054W-A HTD2P38790 280 aaKnown RBP2.45□□□□□ -2.02
YNL054W-AYNL054W-A HYR1P40581 163 aaKnown RBP2.45□□□□□ -2.02
YNL054W-AYNL054W-A PKR1Q03880 122 aaKnown RBP2.45□□□□□ -2.02
YNL054W-AYNL054W-A YMR252CQ04814 134 aa2.45□□□□□ -2.02
YNL054W-AYNL054W-A YPR114WQ06107 315 aa2.45□□□□□ -2.02
YNL054W-AYNL054W-A CCS1P40202 249 aaKnown RBP2.44□□□□□ -2.02
YNL054W-AYNL054W-A CWC27Q02770 301 aa2.44□□□□□ -2.02
YNL054W-AYNL054W-A LIP1Q03579 150 aa2.44□□□□□ -2.02
YNL054W-AYNL054W-A YMR320WQ04897 101 aa2.44□□□□□ -2.02
YNL054W-AYNL054W-A ATG10Q07879 167 aa2.44□□□□□ -2.02
YNL054W-AYNL054W-A STF2P16965 84 aa2.43□□□□□ -2.02
YNL054W-AYNL054W-A UPS3Q04006 179 aa2.43□□□□□ -2.02
YNL054W-AYNL054W-A ELP6Q04868 273 aa2.43□□□□□ -2.02
YNL054W-AYNL054W-A YNL146C-AQ3E7Z1 64 aa2.43□□□□□ -2.02
YNL054W-AYNL054W-A YPT31P38555 223 aaKnown RBP2.42□□□□□ -2.02
YNL054W-AYNL054W-A YHL042WP38729 150 aa2.42□□□□□ -2.02
YNL054W-AYNL054W-A YNR064CP53750 290 aa2.42□□□□□ -2.02
YNL054W-AYNL054W-A CYR1P08678 2026 aaKnown RBP2.42□□□□□ -2.02
YNL054W-AYNL054W-A INO4P13902 151 aa2.42□□□□□ -2.02
YNL054W-AYNL054W-A FPR1P20081 114 aaKnown RBP2.42□□□□□ -2.02
YNL054W-AYNL054W-A MRS4P23500 304 aa2.42□□□□□ -2.02
YNL054W-AYNL054W-A ACP1P32463 125 aa2.42□□□□□ -2.02
YNL054W-AYNL054W-A RCE1Q03530 315 aa2.42□□□□□ -2.02
YNL054W-AYNL054W-A RAV2Q03956 351 aa2.42□□□□□ -2.02
YNL054W-AYNL054W-A YPD1Q07688 167 aa2.42□□□□□ -2.02
YNL054W-AYNL054W-A SPS2P08459 502 aa2.41□□□□□ -2.02
YNL054W-AYNL054W-A YBL010CP32788 280 aa2.41□□□□□ -2.02
YNL054W-AYNL054W-A MRPL24P36525 258 aaPredicted RBP2.41□□□□□ -2.02
YNL054W-AYNL054W-A YEL067CP39978 195 aa2.41□□□□□ -2.02
YNL054W-AYNL054W-A YEL008WP40001 126 aa2.41□□□□□ -2.02
YNL054W-AYNL054W-A YJL218WP40892 196 aaKnown RBP2.41□□□□□ -2.02
YNL054W-AYNL054W-A YGL193CP53097 103 aa2.41□□□□□ -2.02
YNL054W-AYNL054W-A PHO13P19881 312 aa2.4□□□□□ -2.03
YNL054W-AYNL054W-A SPT14P32363 452 aa2.4□□□□□ -2.03
YNL054W-AYNL054W-A ETR1P38071 380 aa2.4□□□□□ -2.03
YNL054W-AYNL054W-A YFL065CP43539 102 aa2.4□□□□□ -2.03
YNL054W-AYNL054W-A YJR015WP47090 510 aa2.4□□□□□ -2.03
YNL054W-AYNL054W-A MZM1Q03429 123 aaPredicted RBP2.4□□□□□ -2.03
YNL054W-AYNL054W-A YML079WQ03629 201 aa2.4□□□□□ -2.03
YNL054W-AYNL054W-A YDL241WQ07738 123 aa2.4□□□□□ -2.03
YNL054W-AYNL054W-A YMR030W-AQ3E760 96 aa2.4□□□□□ -2.03
YNL054W-AYNL054W-A DUR1,2P32528 1835 aaKnown RBP2.39□□□□□ -2.03
YNL054W-AYNL054W-A SEN2P16658 377 aa2.39□□□□□ -2.03
YNL054W-AYNL054W-A MOB1P40484 314 aa2.39□□□□□ -2.03
YNL054W-AYNL054W-A UBC7Q02159 165 aa2.39□□□□□ -2.03
YNL054W-AYNL054W-A YDR391CQ04170 232 aa2.39□□□□□ -2.03
YNL054W-AYNL054W-A YOR1P53049 1477 aa2.38□□□□□ -2.03
YNL054W-AYNL054W-A TAR1Q8TGM6 124 aa2.38□□□□□ -2.03
YNL054W-AYNL054W-A DDR48P18899 430 aaKnown RBP2.37□□□□□ -2.03
YNL054W-AYNL054W-A SOK1P40317 901 aa2.37□□□□□ -2.03
YNL054W-AYNL054W-A YGR269WP40326 108 aa2.37□□□□□ -2.03
YNL054W-AYNL054W-A RBL2P48606 106 aaKnown RBP2.37□□□□□ -2.03
YNL054W-AYNL054W-A UIP4Q08926 304 aa2.37□□□□□ -2.03
YNL054W-AYNL054W-A BEM2P39960 2167 aaKnown RBP2.36□□□□□ -2.03
YNL054W-AYNL054W-A SRP21P32342 167 aa2.36□□□□□ -2.03
YNL054W-AYNL054W-A HRD1Q08109 551 aa2.36□□□□□ -2.03
YNL054W-AYNL054W-A COA3Q3E7B2 85 aa2.35□□□□□ -2.03
YNL054W-AYNL054W-A AQY2P0CD90 149 aa2.34□□□□□ -2.04
YNL054W-AYNL054W-A YAP3P38749 330 aa2.34□□□□□ -2.04
YNL054W-AYNL054W-A YGR201CP42936 225 aa2.34□□□□□ -2.04
YNL054W-AYNL054W-A YCL042WP25572 119 aa2.33□□□□□ -2.04
YNL054W-AYNL054W-A GEP7P53171 287 aa2.33□□□□□ -2.04
YNL054W-AYNL054W-A MET31Q03081 177 aa2.33□□□□□ -2.04
YNL054W-AYNL054W-A RFU1Q08003 200 aa2.33□□□□□ -2.04
YNL054W-AYNL054W-A RPS25BP0C0T4 108 aaKnown RBP2.32□□□□□ -2.04
YNL054W-AYNL054W-A HSP12P22943 109 aaKnown RBP2.32□□□□□ -2.04
YNL054W-AYNL054W-A AVO2Q04749 426 aa2.32□□□□□ -2.04
YNL054W-AYNL054W-A YDL157CQ12082 118 aa2.32□□□□□ -2.04
YNL054W-AYNL054W-A RPS25AQ3E792 108 aaPredicted RBP2.32□□□□□ -2.04
YNL054W-AYNL054W-A COF1Q03048 143 aaKnown RBP2.31□□□□□ -2.04
YNL054W-AYNL054W-A EST3Q03096 181 aa2.31□□□□□ -2.04
YNL054W-AYNL054W-A YBR242WP38331 238 aa2.3□□□□□ -2.04
YNL054W-AYNL054W-A CIN5P40917 295 aa2.3□□□□□ -2.04
YNL054W-AYNL054W-A GLC8P41818 229 aa2.3□□□□□ -2.04
YNL054W-AYNL054W-A YDR366CP87287 132 aa2.3□□□□□ -2.04
YNL054W-AYNL054W-A IRC19Q07843 230 aa2.3□□□□□ -2.04
YNL054W-AYNL054W-A SCS22Q6Q595 175 aa2.3□□□□□ -2.04
YNL054W-AYNL054W-A RIB3Q99258 208 aa2.3□□□□□ -2.04
YNL054W-AYNL054W-A ADE6P38972 1358 aaKnown RBP2.29□□□□□ -2.04
YNL054W-AYNL054W-A AHT1P29589 182 aa2.29□□□□□ -2.04
YNL054W-AYNL054W-A SHB17P36136 271 aaKnown RBP2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 33.3 ms