RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W TSA2Q04120 196 aa5.54□□□□□ -1.52
HDA1YNL021W YBL112CQ3E7Y4 105 aa5.54□□□□□ -1.52
HDA1YNL021W SIR2P06700 562 aa5.53□□□□□ -1.52
HDA1YNL021W YSF3P0C074 85 aaPredicted RBP5.53□□□□□ -1.52
HDA1YNL021W SPT14P32363 452 aa5.53□□□□□ -1.52
HDA1YNL021W ERG24P32462 438 aaKnown RBP5.53□□□□□ -1.52
HDA1YNL021W ZRT3P34240 503 aa5.53□□□□□ -1.52
HDA1YNL021W MRPL24P36525 258 aaPredicted RBP5.53□□□□□ -1.52
HDA1YNL021W NSG1P38837 291 aa5.53□□□□□ -1.52
HDA1YNL021W YMR317WQ04893 1140 aa5.53□□□□□ -1.52
HDA1YNL021W YNL162W-AQ3E7A8 72 aa5.53□□□□□ -1.52
HDA1YNL021W FAS1P07149 2051 aaKnown RBP5.53□□□□□ -1.52
HDA1YNL021W ERJ5P43613 295 aaPredicted RBP5.53□□□□□ -1.52
HDA1YNL021W PGU1P47180 361 aa5.53□□□□□ -1.52
HDA1YNL021W ARO8P53090 500 aaKnown RBP5.53□□□□□ -1.52
HDA1YNL021W PAU12P53343 120 aa5.53□□□□□ -1.52
HDA1YNL021W MCP1Q12106 302 aa5.53□□□□□ -1.52
HDA1YNL021W YDL085C-AQ3E7B7 68 aaKnown RBP5.53□□□□□ -1.52
HDA1YNL021W SUS1Q6WNK7 96 aa5.53□□□□□ -1.52
HDA1YNL021W PTH1P38876 190 aaKnown RBP5.52□□□□□ -1.53
HDA1YNL021W RPL21AQ02753 160 aaKnown RBP5.52□□□□□ -1.53
HDA1YNL021W RAV2Q03956 351 aa5.52□□□□□ -1.53
HDA1YNL021W YDR115WQ04598 105 aa5.52□□□□□ -1.53
HDA1YNL021W ECM19Q06011 112 aa5.52□□□□□ -1.53
HDA1YNL021W MDM32Q12171 622 aa5.52□□□□□ -1.53
HDA1YNL021W ERG2P32352 222 aa5.51□□□□□ -1.53
HDA1YNL021W SFK1P35735 353 aa5.51□□□□□ -1.53
HDA1YNL021W SMP1P38128 452 aa5.51□□□□□ -1.53
HDA1YNL021W YBR220CP38318 560 aa5.51□□□□□ -1.53
HDA1YNL021W VMA7P39111 118 aa5.51□□□□□ -1.53
HDA1YNL021W RNH201P53942 307 aa5.51□□□□□ -1.53
HDA1YNL021W API2Q04413 109 aa5.51□□□□□ -1.53
HDA1YNL021W YMR320WQ04897 101 aa5.51□□□□□ -1.53
HDA1YNL021W RRG7Q08774 242 aaPredicted RBP5.51□□□□□ -1.53
HDA1YNL021W YPS3Q12303 508 aa5.51□□□□□ -1.53
HDA1YNL021W HYM1P32464 399 aa5.51□□□□□ -1.53
HDA1YNL021W SHE2P36068 246 aaKnown RBP RIP-Chip data5.51□□□□□ -1.53not detected
HDA1YNL021W IRC22P40006 225 aa5.51□□□□□ -1.53
HDA1YNL021W RPA43P46669 326 aa5.51□□□□□ -1.53
HDA1YNL021W YLR179CQ06252 201 aaKnown RBP5.51□□□□□ -1.53
HDA1YNL021W HRD1Q08109 551 aa5.51□□□□□ -1.53
HDA1YNL021W CNB1P25296 175 aa5.5□□□□□ -1.53
HDA1YNL021W YBL081WP38180 368 aaKnown RBP5.5□□□□□ -1.53
HDA1YNL021W DOG2P38773 246 aa5.5□□□□□ -1.53
HDA1YNL021W MIG3P39943 394 aa5.5□□□□□ -1.53
HDA1YNL021W YDR391CQ04170 232 aa5.5□□□□□ -1.53
HDA1YNL021W YPL257WQ08974 193 aa5.5□□□□□ -1.53
HDA1YNL021W ATP14Q12349 124 aa5.5□□□□□ -1.53
HDA1YNL021W YLR099W-AQ3E798 87 aa5.5□□□□□ -1.53
HDA1YNL021W COX9P07255 59 aa5.5□□□□□ -1.53
HDA1YNL021W DDI2P0CH63 225 aa5.5□□□□□ -1.53
HDA1YNL021W DDI3P0CH64 225 aa5.5□□□□□ -1.53
HDA1YNL021W RPB9P27999 122 aa5.5□□□□□ -1.53
HDA1YNL021W PAU24P38155 120 aa5.5□□□□□ -1.53
HDA1YNL021W YJR015WP47090 510 aa5.5□□□□□ -1.53
HDA1YNL021W APS2Q00381 147 aa5.5□□□□□ -1.53
HDA1YNL021W YMR253CQ04835 414 aa5.5□□□□□ -1.53
HDA1YNL021W TAD3Q9URQ3 322 aa5.5□□□□□ -1.53
HDA1YNL021W MRP49P32388 137 aa5.49□□□□□ -1.53
HDA1YNL021W TMA19P35691 167 aaKnown RBP5.49□□□□□ -1.53
HDA1YNL021W RCN1P36054 211 aa5.49□□□□□ -1.53
HDA1YNL021W YGP1P38616 354 aaKnown RBP5.49□□□□□ -1.53
HDA1YNL021W COS8P38723 381 aa5.49□□□□□ -1.53
HDA1YNL021W IRC25Q07951 179 aa5.49□□□□□ -1.53
HDA1YNL021W HSP150P32478 413 aa5.48□□□□□ -1.53
HDA1YNL021W YHR180WP38868 163 aa5.48□□□□□ -1.53
HDA1YNL021W YJL028WP47062 111 aa5.48□□□□□ -1.53
HDA1YNL021W SWT21P53873 357 aaPredicted RBP5.48□□□□□ -1.53
HDA1YNL021W HRT1Q08273 121 aa5.48□□□□□ -1.53
HDA1YNL021W PAU2P32612 120 aa5.48□□□□□ -1.53
HDA1YNL021W PAM16P42949 149 aa5.48□□□□□ -1.53
HDA1YNL021W ARP3P47117 449 aaKnown RBP5.48□□□□□ -1.53
HDA1YNL021W YMR252CQ04814 134 aa5.48□□□□□ -1.53
HDA1YNL021W DFM1Q12743 341 aaKnown RBP5.48□□□□□ -1.53
HDA1YNL021W OM14P38325 134 aa5.47□□□□□ -1.53
HDA1YNL021W CUP9P41817 306 aa5.47□□□□□ -1.53
HDA1YNL021W YFR054CP43622 192 aa5.47□□□□□ -1.53
HDA1YNL021W SOL1P50278 321 aa5.47□□□□□ -1.53
HDA1YNL021W YGL262WP53054 175 aa5.47□□□□□ -1.53
HDA1YNL021W YHL044WP38727 235 aa5.47□□□□□ -1.53
HDA1YNL021W SYS1P41544 203 aa5.47□□□□□ -1.53
HDA1YNL021W RPE1P46969 238 aa5.47□□□□□ -1.53
HDA1YNL021W SAY1P53324 424 aa5.47□□□□□ -1.53
HDA1YNL021W SHH4Q06236 168 aa5.47□□□□□ -1.53
HDA1YNL021W YOR343CQ12484 108 aa5.47□□□□□ -1.53
HDA1YNL021W IPP1P00817 287 aaKnown RBP5.46□□□□□ -1.54
HDA1YNL021W MSA2P36157 363 aa5.46□□□□□ -1.54
HDA1YNL021W KRE9P39005 276 aa5.46□□□□□ -1.54
HDA1YNL021W HPA3P39979 161 aa5.46□□□□□ -1.54
HDA1YNL021W DOC1P53068 250 aa5.46□□□□□ -1.54
HDA1YNL021W NIP7Q08962 181 aaKnown RBP5.46□□□□□ -1.54
HDA1YNL021W GEP5Q12393 293 aa5.46□□□□□ -1.54
HDA1YNL021W YIL046W-AQ3E7Z4 54 aa5.46□□□□□ -1.54
HDA1YNL021W ATG39Q06159 398 aa5.45□□□□□ -1.54
HDA1YNL021W CNL1Q06333 122 aa5.45□□□□□ -1.54
HDA1YNL021W IRC19Q07843 230 aa5.45□□□□□ -1.54
HDA1YNL021W YBR298C-AQ8TGK4 73 aa5.45□□□□□ -1.54
HDA1YNL021W PBI2P0CT04 75 aaKnown RBP5.45□□□□□ -1.54
HDA1YNL021W YKL102CP34249 101 aa5.45□□□□□ -1.54
HDA1YNL021W ATG41Q12048 136 aa5.45□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms