RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeastyeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP15YMR304W MRPL49P40858 161 aaPredicted RBP1.99□□□□□ -2.09
UBP15YMR304W CRZ1P53968 678 aa1.99□□□□□ -2.09
UBP15YMR304W PIR3Q03180 325 aa1.99□□□□□ -2.09
UBP15YMR304W SYM1Q06563 197 aa1.99□□□□□ -2.09
UBP15YMR304W MCH1Q07376 486 aa1.99□□□□□ -2.09
UBP15YMR304W PRS5Q12265 496 aaKnown RBP1.99□□□□□ -2.09
UBP15YMR304W YPL229WQ99395 206 aa1.99□□□□□ -2.09
UBP15YMR304W UTP20P35194 2493 aaKnown RBP1.99□□□□□ -2.09
UBP15YMR304W RPL2AP0CX45 254 aaKnown RBP1.99□□□□□ -2.09
UBP15YMR304W RPL2BP0CX46 254 aaKnown RBP1.99□□□□□ -2.09
UBP15YMR304W YIH1P25637 258 aa1.99□□□□□ -2.09
UBP15YMR304W RFA3P26755 122 aaKnown RBP1.99□□□□□ -2.09
UBP15YMR304W PEP8P40335 379 aa1.99□□□□□ -2.09
UBP15YMR304W DLS1P40366 167 aa1.99□□□□□ -2.09
UBP15YMR304W MSL1P40567 111 aaPredicted RBP1.99□□□□□ -2.09
UBP15YMR304W YNR071CP53757 342 aa1.99□□□□□ -2.09
UBP15YMR304W ERV2Q12284 196 aa1.99□□□□□ -2.09
UBP15YMR304W HUT1Q12520 339 aa1.99□□□□□ -2.09
UBP15YMR304W YAL063C-AQ3E791 96 aa1.99□□□□□ -2.09
UBP15YMR304W YPR096CO13587 100 aa1.98□□□□□ -2.09
UBP15YMR304W COX9P07255 59 aa1.98□□□□□ -2.09
UBP15YMR304W YKR041WP36134 250 aa1.98□□□□□ -2.09
UBP15YMR304W RTC2P38279 296 aa1.98□□□□□ -2.09
UBP15YMR304W OM14P38325 134 aa1.98□□□□□ -2.09
UBP15YMR304W YND1P40009 630 aa1.98□□□□□ -2.09
UBP15YMR304W LSM5P40089 93 aaKnown RBP1.98□□□□□ -2.09
UBP15YMR304W YIL086CP40503 102 aa1.98□□□□□ -2.09
UBP15YMR304W SPP2Q02521 185 aa1.98□□□□□ -2.09
UBP15YMR304W NRG1Q03125 231 aa1.98□□□□□ -2.09
UBP15YMR304W ZPS1Q12512 249 aa1.98□□□□□ -2.09
UBP15YMR304W YHR214C-EQ8TGK0 99 aa1.98□□□□□ -2.09
UBP15YMR304W DFR1P07807 211 aaKnown RBP RIP-Chip data1.98□□□□□ -2.09not detected
UBP15YMR304W YCL068CP25593 260 aa1.98□□□□□ -2.09
UBP15YMR304W HOM6P31116 359 aaKnown RBP1.98□□□□□ -2.09
UBP15YMR304W ALK2P32789 676 aaPredicted RBP1.98□□□□□ -2.09
UBP15YMR304W VMA11P32842 164 aa1.98□□□□□ -2.09
UBP15YMR304W COA1P40452 197 aa1.98□□□□□ -2.09
UBP15YMR304W YFR054CP43622 192 aa1.98□□□□□ -2.09
UBP15YMR304W HST4P53688 370 aa1.98□□□□□ -2.09
UBP15YMR304W YMR310CQ04867 317 aaPredicted RBP1.98□□□□□ -2.09
UBP15YMR304W ARR3Q06598 404 aa1.98□□□□□ -2.09
UBP15YMR304W YPL162CQ12042 273 aa1.98□□□□□ -2.09
UBP15YMR304W EAF3Q12432 401 aa1.98□□□□□ -2.09
UBP15YMR304W YDR381C-AQ3E6R5 114 aa1.98□□□□□ -2.09
UBP15YMR304W YNL277W-AQ3E7Z0 62 aa1.98□□□□□ -2.09
UBP15YMR304W AGA2P32781 87 aa1.98□□□□□ -2.09
UBP15YMR304W TOM6P33448 61 aa1.98□□□□□ -2.09
UBP15YMR304W CDC1P40986 491 aa1.98□□□□□ -2.09
UBP15YMR304W GPI2P46961 280 aa1.98□□□□□ -2.09
UBP15YMR304W OST2P46964 130 aa1.98□□□□□ -2.09
UBP15YMR304W EMC4P53073 190 aa1.98□□□□□ -2.09
UBP15YMR304W APS2Q00381 147 aa1.98□□□□□ -2.09
UBP15YMR304W PBP4Q07362 185 aaKnown RBP1.98□□□□□ -2.09
UBP15YMR304W YCL021W-AQ96VH3 125 aa1.98□□□□□ -2.09
UBP15YMR304W UBA3Q99344 299 aa1.98□□□□□ -2.09
UBP15YMR304W PAI3P01094 68 aa1.97□□□□□ -2.09
UBP15YMR304W Q0255P03881 472 aa1.97□□□□□ -2.09
UBP15YMR304W RPL18AP0CX49 186 aaKnown RBP1.97□□□□□ -2.09
UBP15YMR304W RPL18BP0CX50 186 aaKnown RBP1.97□□□□□ -2.09
UBP15YMR304W TOM40P23644 387 aaKnown RBP1.97□□□□□ -2.09
UBP15YMR304W IML3P38265 245 aa1.97□□□□□ -2.09
UBP15YMR304W OXA1P39952 402 aa1.97□□□□□ -2.09
UBP15YMR304W CIS3P47001 227 aa1.97□□□□□ -2.09
UBP15YMR304W DUG3P53871 357 aa1.97□□□□□ -2.09
UBP15YMR304W YCR085WP25650 117 aa1.97□□□□□ -2.09
UBP15YMR304W SHB17P36136 271 aaKnown RBP1.97□□□□□ -2.09
UBP15YMR304W SNF11P38956 169 aa1.97□□□□□ -2.09
UBP15YMR304W COX15P40086 486 aa1.97□□□□□ -2.09
UBP15YMR304W CCS1P40202 249 aaKnown RBP1.97□□□□□ -2.09
UBP15YMR304W SFT1P43682 97 aa1.97□□□□□ -2.09
UBP15YMR304W MHF1Q3E835 90 aa1.97□□□□□ -2.09
UBP15YMR304W RNP1P32385 249 aa1.97□□□□□ -2.09
UBP15YMR304W YHR130CP38834 111 aa1.97□□□□□ -2.09
UBP15YMR304W YAR1P46683 200 aa1.97□□□□□ -2.09
UBP15YMR304W YFL041W-AQ3E817 63 aa1.97□□□□□ -2.09
UBP15YMR304W TIP1P27654 210 aaPredicted RBP1.96□□□□□ -2.1
UBP15YMR304W MF(ALPHA)2P32435 120 aa1.96□□□□□ -2.1
UBP15YMR304W RIM1P32445 135 aaKnown RBP1.96□□□□□ -2.1
UBP15YMR304W YHR180WP38868 163 aa1.96□□□□□ -2.1
UBP15YMR304W MIC27P50945 234 aa1.96□□□□□ -2.1
UBP15YMR304W ERG26P53199 349 aaKnown RBP1.96□□□□□ -2.1
UBP15YMR304W RDL2Q08742 149 aaKnown RBP1.96□□□□□ -2.1
UBP15YMR304W ODC2Q99297 307 aa1.96□□□□□ -2.1
UBP15YMR304W MDH2P22133 377 aa1.96□□□□□ -2.1
UBP15YMR304W YEL045CP32616 141 aa1.96□□□□□ -2.1
UBP15YMR304W SFT2P38166 215 aa1.96□□□□□ -2.1
UBP15YMR304W YHR122WP38829 231 aa1.96□□□□□ -2.1
UBP15YMR304W JAC1P53193 184 aa1.96□□□□□ -2.1
UBP15YMR304W THG1P53215 237 aaKnown RBP1.96□□□□□ -2.1
UBP15YMR304W YNL260CP53846 198 aa1.96□□□□□ -2.1
UBP15YMR304W HHT1P61830 136 aa1.96□□□□□ -2.1
UBP15YMR304W SDC1Q03323 175 aa1.96□□□□□ -2.1
UBP15YMR304W CNL1Q06333 122 aa1.96□□□□□ -2.1
UBP15YMR304W YPL038W-AQ3E7B4 63 aa1.96□□□□□ -2.1
UBP15YMR304W YCL012CQ8J0M4 134 aa1.96□□□□□ -2.1
UBP15YMR304W AHT1P29589 182 aa1.96□□□□□ -2.1
UBP15YMR304W TMA19P35691 167 aaKnown RBP1.96□□□□□ -2.1
UBP15YMR304W YGP1P38616 354 aaKnown RBP1.96□□□□□ -2.1
UBP15YMR304W YIF1P53845 314 aaKnown RBP1.96□□□□□ -2.1
UBP15YMR304W BUD25P85052 153 aa1.96□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 42.2 ms