RNA–Protein interactions for RNA: YMR171C

EAR1, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene EAR1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EAR1YMR171C GLC8P41818 229 aa3.81□□□□□ -1.8
EAR1YMR171C LOC1P43586 204 aaPredicted RBP3.81□□□□□ -1.8
EAR1YMR171C YGR050CP53231 118 aa3.81□□□□□ -1.8
EAR1YMR171C LST7P53237 242 aa3.81□□□□□ -1.8
EAR1YMR171C SAE3P89114 91 aa3.81□□□□□ -1.8
EAR1YMR171C YPR098CQ06089 161 aa3.81□□□□□ -1.8
EAR1YMR171C NAT3Q06504 195 aa3.81□□□□□ -1.8
EAR1YMR171C PAA1Q12447 191 aaKnown RBP3.81□□□□□ -1.8
EAR1YMR171C YDL085C-AQ3E7B7 68 aaKnown RBP3.81□□□□□ -1.8
EAR1YMR171C ILV5P06168 395 aaKnown RBP3.81□□□□□ -1.8
EAR1YMR171C RPS25BP0C0T4 108 aaKnown RBP3.81□□□□□ -1.8
EAR1YMR171C IMP1P28627 190 aa3.81□□□□□ -1.8
EAR1YMR171C HMX1P32339 317 aa3.81□□□□□ -1.8
EAR1YMR171C YGR269WP40326 108 aa3.81□□□□□ -1.8
EAR1YMR171C GPI2P46961 280 aa3.81□□□□□ -1.8
EAR1YMR171C HIT1P46973 164 aa3.81□□□□□ -1.8
EAR1YMR171C MRP51Q02950 344 aa3.81□□□□□ -1.8
EAR1YMR171C RIM9Q04734 239 aa3.81□□□□□ -1.8
EAR1YMR171C AKR2Q12013 749 aa3.81□□□□□ -1.8
EAR1YMR171C POM33Q12164 279 aa3.81□□□□□ -1.8
EAR1YMR171C YDL009CQ12210 107 aa3.81□□□□□ -1.8
EAR1YMR171C SMT3Q12306 101 aaKnown RBP3.81□□□□□ -1.8
EAR1YMR171C RPS25AQ3E792 108 aaPredicted RBP3.81□□□□□ -1.8
EAR1YMR171C YBL059WP34224 193 aa3.8□□□□□ -1.8
EAR1YMR171C DAD2P36162 133 aa3.8□□□□□ -1.8
EAR1YMR171C YHR138CP38841 114 aaPredicted RBP3.8□□□□□ -1.8
EAR1YMR171C GAT2P40209 560 aa3.8□□□□□ -1.8
EAR1YMR171C CYB5P40312 120 aa3.8□□□□□ -1.8
EAR1YMR171C YIP5P53108 310 aa3.8□□□□□ -1.8
EAR1YMR171C RPN14P53196 417 aa3.8□□□□□ -1.8
EAR1YMR171C YPL067CQ02754 198 aa3.8□□□□□ -1.8
EAR1YMR171C YPL077CQ02831 240 aa3.8□□□□□ -1.8
EAR1YMR171C RCE1Q03530 315 aa3.8□□□□□ -1.8
EAR1YMR171C YMR007WQ03675 126 aa3.8□□□□□ -1.8
EAR1YMR171C LOA1Q06508 300 aa3.8□□□□□ -1.8
EAR1YMR171C YOR105WQ08504 108 aa3.8□□□□□ -1.8
EAR1YMR171C MPD1Q12404 318 aaKnown RBP3.8□□□□□ -1.8
EAR1YMR171C YOR192C-CQ3E736 78 aa3.8□□□□□ -1.8
EAR1YMR171C YIL046W-AQ3E7Z4 54 aa3.8□□□□□ -1.8
EAR1YMR171C FLO9P39712 1322 aa3.79□□□□□ -1.8
EAR1YMR171C MRS3P10566 314 aa3.79□□□□□ -1.8
EAR1YMR171C MSI1P13712 422 aa3.79□□□□□ -1.8
EAR1YMR171C SPS18P32572 300 aa3.79□□□□□ -1.8
EAR1YMR171C DER1P38307 211 aa3.79□□□□□ -1.8
EAR1YMR171C XPT1P47165 209 aa3.79□□□□□ -1.8
EAR1YMR171C YDR391CQ04170 232 aa3.79□□□□□ -1.8
EAR1YMR171C ARR2Q06597 130 aa3.79□□□□□ -1.8
EAR1YMR171C YDL180WQ12301 547 aa3.79□□□□□ -1.8
EAR1YMR171C YCL001W-BQ96VH2 84 aa3.79□□□□□ -1.8
EAR1YMR171C POR1P04840 283 aaKnown RBP3.78□□□□□ -1.8
EAR1YMR171C SUA7P29055 345 aaPredicted RBP3.78□□□□□ -1.8
EAR1YMR171C MRPL39P36533 70 aa3.78□□□□□ -1.8
EAR1YMR171C YMR262WP38430 313 aa3.78□□□□□ -1.8
EAR1YMR171C ECO1P43605 281 aa3.78□□□□□ -1.8
EAR1YMR171C YOL118CQ08259 102 aa3.78□□□□□ -1.8
EAR1YMR171C BOL1Q3E793 110 aa3.78□□□□□ -1.8
EAR1YMR171C RPL31AP0C2H8 113 aaKnown RBP3.78□□□□□ -1.81
EAR1YMR171C MIX23P38162 196 aa3.78□□□□□ -1.81
EAR1YMR171C OST1P41543 476 aaKnown RBP3.78□□□□□ -1.81
EAR1YMR171C EGT2P42835 1041 aa3.78□□□□□ -1.81
EAR1YMR171C ARP3P47117 449 aaKnown RBP3.78□□□□□ -1.81
EAR1YMR171C MIC27P50945 234 aa3.78□□□□□ -1.81
EAR1YMR171C CRH1P53301 507 aa3.78□□□□□ -1.81
EAR1YMR171C WSC2P53832 503 aa3.78□□□□□ -1.81
EAR1YMR171C BOR1P53838 576 aa3.78□□□□□ -1.81
EAR1YMR171C LPP1Q04396 274 aa3.78□□□□□ -1.81
EAR1YMR171C LIP2Q06005 328 aa3.78□□□□□ -1.81
EAR1YMR171C FIT3Q08907 204 aa3.78□□□□□ -1.81
EAR1YMR171C YPS3Q12303 508 aa3.78□□□□□ -1.81
EAR1YMR171C YPR014CQ6B0W2 109 aa3.78□□□□□ -1.81
EAR1YMR171C HAP3P13434 144 aa3.77□□□□□ -1.81
EAR1YMR171C YMR31P19955 123 aa3.77□□□□□ -1.81
EAR1YMR171C ROX3P25046 220 aa3.77□□□□□ -1.81
EAR1YMR171C RNA15P25299 296 aaPredicted RBP3.77□□□□□ -1.81
EAR1YMR171C YCR022CP25620 114 aa3.77□□□□□ -1.81
EAR1YMR171C DFG10P40526 253 aa3.77□□□□□ -1.81
EAR1YMR171C YJR015WP47090 510 aa3.77□□□□□ -1.81
EAR1YMR171C UBC13P52490 153 aa3.77□□□□□ -1.81
EAR1YMR171C HSK3P69852 69 aa3.77□□□□□ -1.81
EAR1YMR171C MCH1Q07376 486 aa3.77□□□□□ -1.81
EAR1YMR171C LDS2Q08218 356 aa3.77□□□□□ -1.81
EAR1YMR171C POC4Q12245 148 aaPredicted RBP3.77□□□□□ -1.81
EAR1YMR171C RPS22BQ3E7Y3 130 aaKnown RBP3.77□□□□□ -1.81
EAR1YMR171C VPS63O13549 108 aa3.76□□□□□ -1.81
EAR1YMR171C RPL35AP0CX84 120 aaKnown RBP3.76□□□□□ -1.81
EAR1YMR171C RPL35BP0CX85 120 aaKnown RBP3.76□□□□□ -1.81
EAR1YMR171C AME1P38313 324 aa3.76□□□□□ -1.81
EAR1YMR171C DOG1P38774 246 aa3.76□□□□□ -1.81
EAR1YMR171C RPL21AQ02753 160 aaKnown RBP3.76□□□□□ -1.81
EAR1YMR171C CWC27Q02770 301 aa3.76□□□□□ -1.81
EAR1YMR171C SHH3Q04487 196 aa3.76□□□□□ -1.81
EAR1YMR171C ECM18Q04623 453 aa3.76□□□□□ -1.81
EAR1YMR171C CNL1Q06333 122 aa3.76□□□□□ -1.81
EAR1YMR171C RRS1Q08746 203 aaKnown RBP3.76□□□□□ -1.81
EAR1YMR171C RPL21BQ12672 160 aaKnown RBP3.76□□□□□ -1.81
EAR1YMR171C YGL258W-AQ3E740 77 aa3.76□□□□□ -1.81
EAR1YMR171C Q0144Q9ZZW2 109 aa3.76□□□□□ -1.81
EAR1YMR171C SEN1Q00416 2231 aaKnown RBP3.76□□□□□ -1.81
EAR1YMR171C HFA1P32874 2273 aa3.75□□□□□ -1.81
EAR1YMR171C RPL9AP05738 191 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 153 ms