RNA–Protein interactions for RNA: YLR026C

SED5, Transcript of cis-Golgi t-SNARE syntaxin, yeastyeast

Gene SED5, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED5YLR026C ERG24P32462 438 aaKnown RBP2.09□□□□□ -2.07
SED5YLR026C SCM4P32564 187 aa2.09□□□□□ -2.07
SED5YLR026C SRY1P36007 326 aa2.09□□□□□ -2.07
SED5YLR026C RPS20P38701 121 aaKnown RBP2.09□□□□□ -2.07
SED5YLR026C DOG1P38774 246 aa2.09□□□□□ -2.07
SED5YLR026C YHR125WP38831 101 aa2.09□□□□□ -2.07
SED5YLR026C OTU1P43558 301 aa2.09□□□□□ -2.07
SED5YLR026C RFU1Q08003 200 aa2.09□□□□□ -2.07
SED5YLR026C SPC3Q12133 184 aa2.09□□□□□ -2.07
SED5YLR026C ARG80P07249 177 aa2.08□□□□□ -2.08
SED5YLR026C GRX2P17695 143 aaKnown RBP2.08□□□□□ -2.08
SED5YLR026C ECM31P38122 312 aa2.08□□□□□ -2.08
SED5YLR026C YBR032WP38223 100 aa2.08□□□□□ -2.08
SED5YLR026C COS8P38723 381 aa2.08□□□□□ -2.08
SED5YLR026C VPS55P47111 140 aa2.08□□□□□ -2.08
SED5YLR026C MCM22P47167 239 aa2.08□□□□□ -2.08
SED5YLR026C YGL101WP53144 215 aa2.08□□□□□ -2.08
SED5YLR026C AIM36Q03798 255 aa2.08□□□□□ -2.08
SED5YLR026C PRM3Q08931 133 aa2.08□□□□□ -2.08
SED5YLR026C FCY1Q12178 158 aa2.08□□□□□ -2.08
SED5YLR026C YHR032W-AP0C5N6 59 aa2.07□□□□□ -2.08
SED5YLR026C SNF4P12904 322 aa2.07□□□□□ -2.08
SED5YLR026C RPL30P14120 105 aaKnown RBP2.07□□□□□ -2.08
SED5YLR026C IDH1P28834 360 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
SED5YLR026C TFC1P32367 649 aa2.07□□□□□ -2.08
SED5YLR026C NQM1P53228 333 aaPredicted RBP2.07□□□□□ -2.08
SED5YLR026C NRK1P53915 240 aa2.07□□□□□ -2.08
SED5YLR026C YKR005CQ02203 525 aa2.07□□□□□ -2.08
SED5YLR026C DYN3Q04949 312 aa2.07□□□□□ -2.08
SED5YLR026C SNU23Q12368 194 aaPredicted RBP2.07□□□□□ -2.08
SED5YLR026C ATP7P30902 174 aa2.06□□□□□ -2.08
SED5YLR026C ECM33P38248 429 aaKnown RBP2.06□□□□□ -2.08
SED5YLR026C RPF1P38805 295 aaKnown RBP2.06□□□□□ -2.08
SED5YLR026C HPM1P40481 377 aa2.06□□□□□ -2.08
SED5YLR026C ARC15P40518 154 aaRIP-Chip data2.06□□□□□ -2.08not detected
SED5YLR026C SNX4P47057 423 aa2.06□□□□□ -2.08
SED5YLR026C TTI2P47168 421 aa2.06□□□□□ -2.08
SED5YLR026C SOL1P50278 321 aa2.06□□□□□ -2.08
SED5YLR026C MRPL50P53724 139 aa2.06□□□□□ -2.08
SED5YLR026C ATO3Q12359 275 aa2.06□□□□□ -2.08
SED5YLR026C YKL183C-AQ3E765 70 aa2.06□□□□□ -2.08
SED5YLR026C REP2P03872 296 aa2.05□□□□□ -2.08
SED5YLR026C RPL25P04456 142 aaKnown RBP2.05□□□□□ -2.08
SED5YLR026C HYM1P32464 399 aa2.05□□□□□ -2.08
SED5YLR026C CBT1P36038 271 aaPredicted RBP2.05□□□□□ -2.08
SED5YLR026C MPM1P40364 252 aa2.05□□□□□ -2.08
SED5YLR026C CAT5P41735 233 aa2.05□□□□□ -2.08
SED5YLR026C HAM1P47119 197 aaKnown RBP2.05□□□□□ -2.08
SED5YLR026C GAL83Q04739 417 aa2.05□□□□□ -2.08
SED5YLR026C GGA1Q06336 557 aa2.05□□□□□ -2.08
SED5YLR026C RIB3Q99258 208 aa2.05□□□□□ -2.08
SED5YLR026C KIN28P06242 306 aa2.04□□□□□ -2.08
SED5YLR026C NTG1P31378 399 aa2.04□□□□□ -2.08
SED5YLR026C IPT1P38954 527 aa2.04□□□□□ -2.08
SED5YLR026C MSS2P40990 351 aa2.04□□□□□ -2.08
SED5YLR026C MIC26P50087 233 aa2.04□□□□□ -2.08
SED5YLR026C ERV29P53337 310 aa2.04□□□□□ -2.08
SED5YLR026C YNL033WP53964 284 aa2.04□□□□□ -2.08
SED5YLR026C YNL019CP53975 284 aa2.04□□□□□ -2.08
SED5YLR026C HHT1P61830 136 aa2.04□□□□□ -2.08
SED5YLR026C YDR274CP87283 123 aa2.04□□□□□ -2.08
SED5YLR026C YHP1Q04116 353 aa2.04□□□□□ -2.08
SED5YLR026C UPS1Q05776 175 aa2.04□□□□□ -2.08
SED5YLR026C GPI11Q06636 219 aa2.04□□□□□ -2.08
SED5YLR026C CDC10P25342 322 aaKnown RBP2.03□□□□□ -2.08
SED5YLR026C ATG22P25568 528 aa2.03□□□□□ -2.08
SED5YLR026C SRL3P36167 246 aa2.03□□□□□ -2.08
SED5YLR026C SKG1P36169 355 aa2.03□□□□□ -2.08
SED5YLR026C RIB1P38066 345 aa2.03□□□□□ -2.08
SED5YLR026C SSH1P38353 490 aaKnown RBP2.03□□□□□ -2.08
SED5YLR026C MPC2P38857 129 aa2.03□□□□□ -2.08
SED5YLR026C DLS1P40366 167 aa2.03□□□□□ -2.08
SED5YLR026C YFR035CP43608 114 aa2.03□□□□□ -2.08
SED5YLR026C RMR1P53060 241 aa2.03□□□□□ -2.08
SED5YLR026C PGA1P53896 198 aa2.03□□□□□ -2.08
SED5YLR026C GRX3Q03835 250 aa2.03□□□□□ -2.08
SED5YLR026C ATG40Q99325 256 aa2.03□□□□□ -2.08
SED5YLR026C ROX3P25046 220 aa2.02□□□□□ -2.09
SED5YLR026C VMA6P32366 345 aaKnown RBP2.02□□□□□ -2.09
SED5YLR026C FMP23P38231 175 aa2.02□□□□□ -2.09
SED5YLR026C MIC12P38341 106 aa2.02□□□□□ -2.09
SED5YLR026C IRC22P40006 225 aa2.02□□□□□ -2.09
SED5YLR026C GAT4P40569 121 aa2.02□□□□□ -2.09
SED5YLR026C MGA1P53050 456 aa2.02□□□□□ -2.09
SED5YLR026C SAY1P53324 424 aa2.02□□□□□ -2.09
SED5YLR026C DID2P69771 204 aa2.02□□□□□ -2.09
SED5YLR026C DAD3P69850 94 aa2.02□□□□□ -2.09
SED5YLR026C MPD1Q12404 318 aaKnown RBP2.02□□□□□ -2.09
SED5YLR026C ADK1P07170 222 aaKnown RBP2.01□□□□□ -2.09
SED5YLR026C FBA1P14540 359 aaKnown RBP2.01□□□□□ -2.09
SED5YLR026C ECM4P36156 370 aa2.01□□□□□ -2.09
SED5YLR026C RIO2P40160 425 aaKnown RBP2.01□□□□□ -2.09
SED5YLR026C BMT5P40493 336 aa2.01□□□□□ -2.09
SED5YLR026C RPL9BP51401 191 aaKnown RBP2.01□□□□□ -2.09
SED5YLR026C HSK3P69852 69 aa2.01□□□□□ -2.09
SED5YLR026C YMR099CQ03161 297 aaKnown RBP2.01□□□□□ -2.09
SED5YLR026C ELP6Q04868 273 aa2.01□□□□□ -2.09
SED5YLR026C HUT1Q12520 339 aa2.01□□□□□ -2.09
SED5YLR026C HTL1Q9URQ5 78 aa2.01□□□□□ -2.09
SED5YLR026C STF2P16965 84 aa2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms