RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C YNR071CP53757 342 aa1.98□□□□□ -2.09
VPS13YLL040C YIL102C-AQ2V2P5 75 aa1.98□□□□□ -2.09
VPS13YLL040C TY1A-HP0C2I4 478 aaKnown RBP1.98□□□□□ -2.09
VPS13YLL040C GSP1P32835 219 aaKnown RBP1.98□□□□□ -2.09
VPS13YLL040C GSP2P32836 220 aaKnown RBP1.98□□□□□ -2.09
VPS13YLL040C YKL097CP34245 136 aa1.98□□□□□ -2.09
VPS13YLL040C FIT3Q08907 204 aa1.98□□□□□ -2.09
VPS13YLL040C PRP46Q12417 451 aaPredicted RBP1.98□□□□□ -2.09
VPS13YLL040C YDR461C-AQ2V2P7 80 aa1.98□□□□□ -2.09
VPS13YLL040C TOM1Q03280 3268 aa1.98□□□□□ -2.09
VPS13YLL040C HTL1Q9URQ5 78 aa1.98□□□□□ -2.09
VPS13YLL040C MRPS5P33759 307 aa1.98□□□□□ -2.09
VPS13YLL040C YNK1P36010 153 aaKnown RBP1.98□□□□□ -2.09
VPS13YLL040C NMA1Q06178 401 aaKnown RBP1.98□□□□□ -2.09
VPS13YLL040C RPL9AP05738 191 aaKnown RBP1.98□□□□□ -2.09
VPS13YLL040C FCY2P17064 533 aa1.98□□□□□ -2.09
VPS13YLL040C RPL9BP51401 191 aaKnown RBP1.98□□□□□ -2.09
VPS13YLL040C IZH3Q07959 543 aa1.98□□□□□ -2.09
VPS13YLL040C RDL2Q08742 149 aaKnown RBP1.98□□□□□ -2.09
VPS13YLL040C SWT1Q12104 458 aa1.98□□□□□ -2.09
VPS13YLL040C SME1Q12330 94 aaPredicted RBP1.98□□□□□ -2.09
VPS13YLL040C FCF1Q05498 189 aaPredicted RBP1.97□□□□□ -2.09
VPS13YLL040C CPT1P17898 393 aa1.97□□□□□ -2.09
VPS13YLL040C YIL077CP40508 320 aa1.97□□□□□ -2.09
VPS13YLL040C PAM16P42949 149 aa1.97□□□□□ -2.09
VPS13YLL040C COX12Q01519 83 aa1.97□□□□□ -2.09
VPS13YLL040C YNL217WP40152 326 aa1.97□□□□□ -2.09
VPS13YLL040C IMP2P46972 177 aa1.97□□□□□ -2.09
VPS13YLL040C BUD25P85052 153 aa1.97□□□□□ -2.09
VPS13YLL040C CYC7P00045 113 aa1.97□□□□□ -2.09
VPS13YLL040C POR1P04840 283 aaKnown RBP1.97□□□□□ -2.09
VPS13YLL040C IMP1P28627 190 aa1.97□□□□□ -2.09
VPS13YLL040C ECM33P38248 429 aaKnown RBP1.97□□□□□ -2.09
VPS13YLL040C YPL077CQ02831 240 aa1.97□□□□□ -2.09
VPS13YLL040C FIT2Q08906 153 aa1.97□□□□□ -2.09
VPS13YLL040C YOR015WQ12169 119 aa1.97□□□□□ -2.09
VPS13YLL040C HYP2P23301 157 aaKnown RBP1.97□□□□□ -2.09
VPS13YLL040C YGR219WP53307 113 aa1.97□□□□□ -2.09
VPS13YLL040C YND1P40009 630 aa1.97□□□□□ -2.09
VPS13YLL040C VPS71Q03433 280 aa1.97□□□□□ -2.09
VPS13YLL040C KRE1P17260 313 aa1.97□□□□□ -2.09
VPS13YLL040C MNS1P32906 549 aa1.97□□□□□ -2.09
VPS13YLL040C YGP1P38616 354 aaKnown RBP1.97□□□□□ -2.09
VPS13YLL040C YJR096WP47137 282 aa1.97□□□□□ -2.09
VPS13YLL040C SOD1P00445 154 aaKnown RBP1.96□□□□□ -2.09
VPS13YLL040C DAT1P13483 248 aaKnown RBP1.96□□□□□ -2.09
VPS13YLL040C HSP12P22943 109 aaKnown RBP1.96□□□□□ -2.09
VPS13YLL040C SWD3P38123 315 aa1.96□□□□□ -2.09
VPS13YLL040C SUN4P53616 420 aa1.96□□□□□ -2.09
VPS13YLL040C MSA1Q08471 629 aa1.96□□□□□ -2.09
VPS13YLL040C YAL064W-BO13512 126 aa1.96□□□□□ -2.1
VPS13YLL040C ANB1P19211 157 aa1.96□□□□□ -2.1
VPS13YLL040C SHO1P40073 367 aa1.96□□□□□ -2.1
VPS13YLL040C SHH3Q04487 196 aa1.96□□□□□ -2.1
VPS13YLL040C NAT3Q06504 195 aa1.96□□□□□ -2.1
VPS13YLL040C YDL180WQ12301 547 aa1.96□□□□□ -2.1
VPS13YLL040C SWM1Q12379 170 aa1.96□□□□□ -2.1
VPS13YLL040C YLR363W-AQ3E747 85 aa1.96□□□□□ -2.1
VPS13YLL040C SEC4P07560 215 aaKnown RBP1.96□□□□□ -2.1
VPS13YLL040C MRS4P23500 304 aa1.96□□□□□ -2.1
VPS13YLL040C YCR006CP25350 157 aa1.96□□□□□ -2.1
VPS13YLL040C ELO2P25358 347 aa1.96□□□□□ -2.1
VPS13YLL040C YBR184WP38299 523 aa1.96□□□□□ -2.1
VPS13YLL040C YCR024C-BQ3E7Z8 88 aa1.96□□□□□ -2.1
VPS13YLL040C HSP150P32478 413 aa1.96□□□□□ -2.1
VPS13YLL040C DFG10P40526 253 aa1.96□□□□□ -2.1
VPS13YLL040C SPG5P42933 373 aa1.96□□□□□ -2.1
VPS13YLL040C MSI1P13712 422 aa1.96□□□□□ -2.1
VPS13YLL040C SOH1P38633 127 aa1.96□□□□□ -2.1
VPS13YLL040C MSL1P40567 111 aaPredicted RBP1.96□□□□□ -2.1
VPS13YLL040C ERP4Q12450 207 aa1.96□□□□□ -2.1
VPS13YLL040C RPL27BP0C2H7 136 aaKnown RBP1.96□□□□□ -2.1
VPS13YLL040C MRPL16P38064 232 aa1.96□□□□□ -2.1
VPS13YLL040C HAC1P41546 238 aa1.96□□□□□ -2.1
VPS13YLL040C HSK3P69852 69 aa1.96□□□□□ -2.1
VPS13YLL040C PFY1P07274 126 aa1.96□□□□□ -2.1
VPS13YLL040C LDB16P25587 256 aa1.96□□□□□ -2.1
VPS13YLL040C YJL028WP47062 111 aa1.96□□□□□ -2.1
VPS13YLL040C DAD3P69850 94 aa1.96□□□□□ -2.1
VPS13YLL040C YCH1P42937 148 aa1.95□□□□□ -2.1
VPS13YLL040C SNO3P43544 222 aa1.95□□□□□ -2.1
VPS13YLL040C YFR054CP43622 192 aa1.95□□□□□ -2.1
VPS13YLL040C SNO2P53823 222 aa1.95□□□□□ -2.1
VPS13YLL040C YKR041WP36134 250 aa1.95□□□□□ -2.1
VPS13YLL040C DUO1P53168 247 aaKnown RBP1.95□□□□□ -2.1
VPS13YLL040C MIC12P38341 106 aa1.95□□□□□ -2.1
VPS13YLL040C MIX17Q03667 156 aa1.95□□□□□ -2.1
VPS13YLL040C AQY1P0CD91 305 aa1.95□□□□□ -2.1
VPS13YLL040C SDS23P53172 527 aa1.95□□□□□ -2.1
VPS13YLL040C TEX1P53851 422 aaKnown RBP1.95□□□□□ -2.1
VPS13YLL040C STE18P18852 110 aa1.95□□□□□ -2.1
VPS13YLL040C YAR029WP39549 74 aa1.95□□□□□ -2.1
VPS13YLL040C ATG21Q02887 496 aa1.95□□□□□ -2.1
VPS13YLL040C NOP16P40007 231 aaKnown RBP1.95□□□□□ -2.1
VPS13YLL040C LPP1Q04396 274 aa1.95□□□□□ -2.1
VPS13YLL040C YCR023CP25351 611 aa1.95□□□□□ -2.1
VPS13YLL040C YFT2Q06676 274 aa1.95□□□□□ -2.1
VPS13YLL040C DFR1P07807 211 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1not detected
VPS13YLL040C STE4P18851 423 aa1.95□□□□□ -2.1
VPS13YLL040C YPI1P43587 155 aa1.95□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 154.9 ms