RNA–Protein interactions for RNA: YKL137W

CMC1, Transcript of Copper-binding protein of the mitochondrial intermembrane space, yeast

Gene CMC1, Length 336 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMC1	YKL137W	GLR1	P41921	483 aa	Known RBP	0.79	□□□□□ -2.28
CMC1	YKL137W	FCY1	Q12178	158 aa		0.79	□□□□□ -2.28
CMC1	YKL137W	CPR5	P35176	225 aa		0.78	□□□□□ -2.28
CMC1	YKL137W	YKR041W	P36134	250 aa		0.78	□□□□□ -2.28
CMC1	YKL137W	POG1	P40473	351 aa		0.78	□□□□□ -2.28
CMC1	YKL137W	NUF2	P33895	451 aa		0.77	□□□□□ -2.29
CMC1	YKL137W	YGR269W	P40326	108 aa		0.77	□□□□□ -2.29
CMC1	YKL137W	NQM1	P53228	333 aa	Predicted RBP	0.77	□□□□□ -2.29
CMC1	YKL137W	AVO2	Q04749	426 aa		0.77	□□□□□ -2.29
CMC1	YKL137W	TRM3	Q07527	1436 aa		0.76	□□□□□ -2.29
CMC1	YKL137W	KIN28	P06242	306 aa		0.76	□□□□□ -2.29
CMC1	YKL137W	RPS25B	P0C0T4	108 aa	Known RBP	0.76	□□□□□ -2.29
CMC1	YKL137W	ATP7	P30902	174 aa		0.76	□□□□□ -2.29
CMC1	YKL137W	CIN5	P40917	295 aa		0.76	□□□□□ -2.29
CMC1	YKL137W	APS3	P47064	194 aa		0.76	□□□□□ -2.29
CMC1	YKL137W	PLP1	Q04004	230 aa		0.76	□□□□□ -2.29
CMC1	YKL137W	RPS25A	Q3E792	108 aa	Predicted RBP	0.76	□□□□□ -2.29
CMC1	YKL137W	APA2	P22108	325 aa		0.75	□□□□□ -2.29
CMC1	YKL137W	GEP7	P53171	287 aa		0.75	□□□□□ -2.29
CMC1	YKL137W	YHR213W-B	Q8TGK1	99 aa		0.75	□□□□□ -2.29
CMC1	YKL137W	SPS2	P08459	502 aa		0.74	□□□□□ -2.29
CMC1	YKL137W	YOL013W-A	P0C272	63 aa	Predicted RBP	0.74	□□□□□ -2.29
CMC1	YKL137W	PEX11	Q12462	236 aa		0.74	□□□□□ -2.29
CMC1	YKL137W	TRR1	P29509	319 aa	Known RBP	0.73	□□□□□ -2.29
CMC1	YKL137W	SYM1	Q06563	197 aa		0.73	□□□□□ -2.29
CMC1	YKL137W	VAM10	Q08474	114 aa		0.73	□□□□□ -2.29
CMC1	YKL137W	YEL028W	P39989	153 aa		0.72	□□□□□ -2.29
CMC1	YKL137W	SOL1	P50278	321 aa		0.72	□□□□□ -2.29
CMC1	YKL137W	UIP4	Q08926	304 aa		0.72	□□□□□ -2.29
CMC1	YKL137W	SED1	Q01589	338 aa		0.71	□□□□□ -2.3
CMC1	YKL137W	LIP1	Q03579	150 aa		0.71	□□□□□ -2.3
CMC1	YKL137W	DUR1,2	P32528	1835 aa	Known RBP	0.71	□□□□□ -2.3
CMC1	YKL137W	HHY1	P39982	102 aa		0.7	□□□□□ -2.3
CMC1	YKL137W	PRM3	Q08931	133 aa		0.7	□□□□□ -2.3
CMC1	YKL137W	YLR422W	Q06409	1932 aa		0.7	□□□□□ -2.3
CMC1	YKL137W	SEC72	P39742	193 aa	Known RBP	0.69	□□□□□ -2.3
CMC1	YKL137W	GIM3	P53900	129 aa		0.69	□□□□□ -2.3
CMC1	YKL137W	TAF2	P23255	1407 aa		0.69	□□□□□ -2.3
CMC1	YKL137W	UBC6	P33296	250 aa	Predicted RBP	0.68	□□□□□ -2.3
CMC1	YKL137W	CSH1	P38287	376 aa		0.68	□□□□□ -2.3
CMC1	YKL137W	ATG10	Q07879	167 aa		0.68	□□□□□ -2.3
CMC1	YKL137W	SPT14	P32363	452 aa		0.67	□□□□□ -2.3
CMC1	YKL137W	YBR027C	P38220	110 aa		0.67	□□□□□ -2.3
CMC1	YKL137W	GLC8	P41818	229 aa		0.67	□□□□□ -2.3
CMC1	YKL137W	YOR072W	Q08486	104 aa		0.67	□□□□□ -2.3
CMC1	YKL137W	YLR050C	Q12155	161 aa	Known RBP	0.67	□□□□□ -2.3
CMC1	YKL137W	INO4	P13902	151 aa		0.66	□□□□□ -2.3
CMC1	YKL137W	SRP102	P36057	244 aa	Predicted RBP	0.66	□□□□□ -2.3
CMC1	YKL137W	PRP8	P33334	2413 aa	Known RBP	0.66	□□□□□ -2.3
CMC1	YKL137W	PTC1	P35182	281 aa		0.65	□□□□□ -2.31
CMC1	YKL137W	YNL122C	P53921	115 aa	Predicted RBP	0.65	□□□□□ -2.31
CMC1	YKL137W	THI74	Q04083	370 aa		0.65	□□□□□ -2.31
CMC1	YKL137W	CMD1	P06787	147 aa	Known RBP	0.64	□□□□□ -2.31
CMC1	YKL137W	RAD51	P25454	400 aa		0.64	□□□□□ -2.31
CMC1	YKL137W	YEL014C	P39999	101 aa		0.64	□□□□□ -2.31
CMC1	YKL137W	CCC1	P47818	322 aa		0.64	□□□□□ -2.31
CMC1	YKL137W	ECM31	P38122	312 aa		0.63	□□□□□ -2.31
CMC1	YKL137W	YPT31	P38555	223 aa	Known RBP	0.63	□□□□□ -2.31
CMC1	YKL137W	SRP14	P38985	146 aa		0.62	□□□□□ -2.31
CMC1	YKL137W	TMA20	P89886	181 aa	Predicted RBP	0.62	□□□□□ -2.31
CMC1	YKL137W	YPR114W	Q06107	315 aa		0.62	□□□□□ -2.31
CMC1	YKL137W	YDL241W	Q07738	123 aa		0.62	□□□□□ -2.31
CMC1	YKL137W	ROM2	P51862	1356 aa	Known RBP	0.61	□□□□□ -2.31
CMC1	YKL137W	HAP2	P06774	265 aa		0.61	□□□□□ -2.31
CMC1	YKL137W	RPS22A	P0C0W1	130 aa	Known RBP	0.61	□□□□□ -2.31
CMC1	YKL137W	HYP2	P23301	157 aa	Known RBP	0.61	□□□□□ -2.31
CMC1	YKL137W	EGD2	P38879	174 aa	Known RBP	0.61	□□□□□ -2.31
CMC1	YKL137W	YNL140C	P53910	189 aa		0.61	□□□□□ -2.31
CMC1	YKL137W	MGR2	Q02889	113 aa		0.61	□□□□□ -2.31
CMC1	YKL137W	GRX3	Q03835	250 aa		0.61	□□□□□ -2.31
CMC1	YKL137W	GRE1	Q08969	168 aa		0.61	□□□□□ -2.31
CMC1	YKL137W	RPS22B	Q3E7Y3	130 aa	Known RBP	0.61	□□□□□ -2.31
CMC1	YKL137W	ADE6	P38972	1358 aa	Known RBP	0.6	□□□□□ -2.31
CMC1	YKL137W	YIP3	P53633	176 aa		0.6	□□□□□ -2.31
CMC1	YKL137W	YNR064C	P53750	290 aa		0.6	□□□□□ -2.31
CMC1	YKL137W	HFA1	P32874	2273 aa		0.59	□□□□□ -2.31
CMC1	YKL137W	CMC4	Q3E7A9	73 aa		0.58	□□□□□ -2.32
CMC1	YKL137W	HSP150	P32478	413 aa		0.57	□□□□□ -2.32
CMC1	YKL137W	ATG8	P38182	117 aa	RIP-Chip data	0.57	□□□□□ -2.32	not detected
CMC1	YKL137W	HSK3	P69852	69 aa		0.57	□□□□□ -2.32
CMC1	YKL137W	YDR102C	Q03864	110 aa		0.57	□□□□□ -2.32
CMC1	YKL137W	NMA1	Q06178	401 aa	Known RBP	0.57	□□□□□ -2.32
CMC1	YKL137W	YLR046C	Q12253	270 aa		0.56	□□□□□ -2.32
CMC1	YKL137W	ATP5	P09457	212 aa		0.55	□□□□□ -2.32
CMC1	YKL137W	HTD2	P38790	280 aa	Known RBP	0.55	□□□□□ -2.32
CMC1	YKL137W	YMR141C	P40211	102 aa		0.55	□□□□□ -2.32
CMC1	YKL137W	YGL101W	P53144	215 aa		0.55	□□□□□ -2.32
CMC1	YKL137W	YGL041W-A	P0C5N3	154 aa		0.54	□□□□□ -2.32
CMC1	YKL137W	FMN1	Q03778	218 aa		0.54	□□□□□ -2.32
CMC1	YKL137W	IPT1	P38954	527 aa		0.52	□□□□□ -2.33
CMC1	YKL137W	RCF2	P53721	224 aa		0.52	□□□□□ -2.33
CMC1	YKL137W	SPA2	P23201	1466 aa	Known RBP	0.52	□□□□□ -2.33
CMC1	YKL137W	RPL43A	P0CX25	92 aa	Known RBP	0.51	□□□□□ -2.33
CMC1	YKL137W	RPL43B	P0CX26	92 aa		0.51	□□□□□ -2.33
CMC1	YKL137W	RIB3	Q99258	208 aa		0.51	□□□□□ -2.33
CMC1	YKL137W	ATG38	Q05789	226 aa	Known RBP	0.5	□□□□□ -2.33
CMC1	YKL137W	RPL33A	P05744	107 aa	Known RBP	0.49	□□□□□ -2.33
CMC1	YKL137W	RPL35A	P0CX84	120 aa	Known RBP	0.49	□□□□□ -2.33
CMC1	YKL137W	RPL35B	P0CX85	120 aa	Known RBP	0.49	□□□□□ -2.33
CMC1	YKL137W	YJL009W	P47078	108 aa		0.49	□□□□□ -2.33

Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms